CB294002

Overview
NameCB294002
Unique NameCB294002
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CB294002_ssr23 microsatellite CB294002_ssr23:23..32. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13557 contig Csv1_Contig13557:14..826. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB294002 vs. ExPASy Swiss-Prot
Match: ENO_LOLPE (Enolase OS=Loligo pealeii PE=2 SV=1)

HSP 1 Score: 326.635 bits (836), Expect = 9.894e-89
Identity = 175/247 (70.85%), Postives = 197/247 (79.76%), Query Frame = 2
Query:   77 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRD-GGSDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYTGKV 808
            + I  V +RQIFDSRGNPTVEVD+ T  G + RAAVPSGASTGIYEALE+RD    +Y GK +  AV NVN II PAL  K  D  +QTA+DN+++  LDGT N     K KLGANAIL VSLAVCKAGA  K +PLY+HIA+L+GNK ++LPVPAFNVINGGSHAGNKLAMQEFMILP GA  F EAMKMG EVYHHLK+VIKKKYGQDA NVGDEGGFAPNI +NKEGLELL TAIA AGYT ++
Sbjct:    1 MVIKKVHSRQIFDSRGNPTVEVDLWTDKG-MFRAAVPSGASTGIYEALEMRDKDAKNYHGKTLFNAVGNVNKIIAPALVDKKMDEKDQTAVDNFLLA-LDGTEN-----KNKLGANAILGVSLAVCKAGAAAKGVPLYRHIADLAGNKEVILPVPAFNVINGGSHAGNKLAMQEFMILPTGAKNFTEAMKMGTEVYHHLKSVIKKKYGQDACNVGDEGGFAPNILDNKEGLELLKTAIANAGYTAEI 240          
BLAST of CB294002 vs. ExPASy Swiss-Prot
Match: ENOA_MACFA (Alpha-enolase OS=Macaca fascicularis GN=ENO1 PE=2 SV=1)

HSP 1 Score: 326.635 bits (836), Expect = 9.894e-89
Identity = 176/248 (70.97%), Postives = 201/248 (81.05%), Query Frame = 2
Query:   77 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYTGKVV 811
            ++I  V AR+IFDSRGNPTVEVD+ TS G + RAAVPSGASTGIYEALELRD     Y+GKGVSKAV ++N  I PAL  K  + TEQ  ID  M++ +DGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLAMQEFMILPVGA+ F+EAM++G EVYH+LK VIK+KYG+DATNVGDEGGFAPNI ENKEGLELL TAI KAGYT KVV
Sbjct:    1 MSILKVHAREIFDSRGNPTVEVDLFTSKG-LFRAAVPSGASTGIYEALELRDNDKTRYMGKGVSKAVEHINKTIAPALVSKKLNVTEQEKIDKLMIE-MDGTEN-----KSKFGANAILGVSLAVCKAGAVEKGVPLYRHIADLAGNSEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAANFREAMRIGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILENKEGLELLKTAIGKAGYTDKVV 241          
BLAST of CB294002 vs. ExPASy Swiss-Prot
Match: ENO_PLAFG (Enolase OS=Plasmodium falciparum (isolate FCR-3 / Gambia) GN=ENO PE=2 SV=1)

HSP 1 Score: 326.25 bits (835), Expect = 1.292e-88
Identity = 169/249 (67.87%), Postives = 196/249 (78.71%), Query Frame = 2
Query:   71 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN--LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYTGKV 808
            MA  IT + AR+I DSRGNPTVEVD+ T+ G + RAAVPSGASTGIYEALELRD   S YLGKGV KA+ N+N II P L G + TEQ  IDN MV++LDG+ NEWGW K KLGANAILA+S+AVC+AGA   K+ LYK++A+L+G K+  +VLPVP  NVINGGSHAGNKL+ QEFMI+PVGA  FKEA++ G EVYH LK+ IKKKYG DATNVGDEGGFAPNI    E L+LL TAI  AGY GKV
Sbjct:    1 MAHVITRINAREILDSRGNPTVEVDLETNLG-IFRAAVPSGASTGIYEALELRDNDKSRYLGKGVQKAIKNINEIIAPKLIGMNCTEQKKIDNLMVEELDGSKNEWGWSKSKLGANAILAISMAVCRAGAAANKVSLYKYLAQLAGKKSDQMVLPVPCLNVINGGSHAGNKLSFQEFMIVPVGAPSFKEALRYGAEVYHTLKSEIKKKYGIDATNVGDEGGFAPNILNANEALDLLVTAIKSAGYEGKV 248          
BLAST of CB294002 vs. ExPASy Swiss-Prot
Match: ENO_PLAF7 (Enolase OS=Plasmodium falciparum (isolate 3D7) GN=ENO PE=3 SV=1)

HSP 1 Score: 326.25 bits (835), Expect = 1.292e-88
Identity = 169/249 (67.87%), Postives = 196/249 (78.71%), Query Frame = 2
Query:   71 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN--LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYTGKV 808
            MA  IT + AR+I DSRGNPTVEVD+ T+ G + RAAVPSGASTGIYEALELRD   S YLGKGV KA+ N+N II P L G + TEQ  IDN MV++LDG+ NEWGW K KLGANAILA+S+AVC+AGA   K+ LYK++A+L+G K+  +VLPVP  NVINGGSHAGNKL+ QEFMI+PVGA  FKEA++ G EVYH LK+ IKKKYG DATNVGDEGGFAPNI    E L+LL TAI  AGY GKV
Sbjct:    1 MAHVITRINAREILDSRGNPTVEVDLETNLG-IFRAAVPSGASTGIYEALELRDNDKSRYLGKGVQKAIKNINEIIAPKLIGMNCTEQKKIDNLMVEELDGSKNEWGWSKSKLGANAILAISMAVCRAGAAANKVSLYKYLAQLAGKKSDQMVLPVPCLNVINGGSHAGNKLSFQEFMIVPVGAPSFKEALRYGAEVYHTLKSEIKKKYGIDATNVGDEGGFAPNILNANEALDLLVTAIKSAGYEGKV 248          
BLAST of CB294002 vs. ExPASy Swiss-Prot
Match: ENO_FASHE (Enolase OS=Fasciola hepatica GN=ENO PE=2 SV=1)

HSP 1 Score: 326.25 bits (835), Expect = 1.292e-88
Identity = 173/246 (70.33%), Postives = 202/246 (82.11%), Query Frame = 2
Query:   77 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYTGKV 808
            + I A+ ARQIFDSRGNPTVEVDVTT+ G + RAAVPSGASTG++EALELRDG   Y+GKGV KAV+NVN+ I P L  +G + T+Q A+D +M+  LDGT N     K+KLGANAIL VSLA CKAGA  K +PLYK+IA L+GNK +++PVP+FNVINGGSHAGNKLAMQEFMI+P GAS F EAMK+G EVYH+L+AVIK KYG DA NVGDEGGFAP+IQ+N EGLELL TAI KAGYTGKV
Sbjct:    1 MAIKAIHARQIFDSRGNPTVEVDVTTAKG-LFRAAVPSGASTGVHEALELRDGPPGYMGKGVLKAVANVNSQIAPNLIKSGINVTDQAAVDKFMLD-LDGTPN-----KEKLGANAILGVSLAXCKAGAAEKGLPLYKYIATLAGNKEVIMPVPSFNVINGGSHAGNKLAMQEFMIMPTGASSFTEAMKIGSEVYHNLRAVIKSKYGLDACNVGDEGGFAPSIQDNLEGLELLRTAIDKAGYTGKV 239          
BLAST of CB294002 vs. ExPASy Swiss-Prot
Match: ENOA_PONAB (Alpha-enolase OS=Pongo abelii GN=ENO1 PE=2 SV=1)

HSP 1 Score: 326.25 bits (835), Expect = 1.292e-88
Identity = 175/248 (70.56%), Postives = 201/248 (81.05%), Query Frame = 2
Query:   77 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYTGKVV 811
            ++I  + AR+IFDSRGNPTVEVD+ TS G + RAAVPSGASTGIYEALELRD     Y+GKGVSKAV ++N  I PAL  K  + TEQ  ID  M++ +DGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLAMQEFMILPVGA+ F+EAM++G EVYH+LK VIK+KYG+DATNVGDEGGFAPNI ENKEGLELL TAI KAGYT KVV
Sbjct:    1 MSILKIHAREIFDSRGNPTVEVDLFTSKG-LFRAAVPSGASTGIYEALELRDNDKTRYMGKGVSKAVEHINKTIAPALVSKKLNVTEQEKIDKLMIE-MDGTEN-----KSKFGANAILGVSLAVCKAGAVEKGVPLYRHIADLAGNSEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAANFREAMRIGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILENKEGLELLKTAIGKAGYTDKVV 241          
BLAST of CB294002 vs. ExPASy Swiss-Prot
Match: ENOA_HUMAN (Alpha-enolase OS=Homo sapiens GN=ENO1 PE=1 SV=2)

HSP 1 Score: 326.25 bits (835), Expect = 1.292e-88
Identity = 175/248 (70.56%), Postives = 201/248 (81.05%), Query Frame = 2
Query:   77 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYTGKVV 811
            ++I  + AR+IFDSRGNPTVEVD+ TS G + RAAVPSGASTGIYEALELRD     Y+GKGVSKAV ++N  I PAL  K  + TEQ  ID  M++ +DGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLAMQEFMILPVGA+ F+EAM++G EVYH+LK VIK+KYG+DATNVGDEGGFAPNI ENKEGLELL TAI KAGYT KVV
Sbjct:    1 MSILKIHAREIFDSRGNPTVEVDLFTSKG-LFRAAVPSGASTGIYEALELRDNDKTRYMGKGVSKAVEHINKTIAPALVSKKLNVTEQEKIDKLMIE-MDGTEN-----KSKFGANAILGVSLAVCKAGAVEKGVPLYRHIADLAGNSEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAANFREAMRIGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILENKEGLELLKTAIGKAGYTDKVV 241          
BLAST of CB294002 vs. ExPASy Swiss-Prot
Match: ENO_PLAFA (Enolase OS=Plasmodium falciparum GN=ENO PE=3 SV=1)

HSP 1 Score: 325.479 bits (833), Expect = 2.204e-88
Identity = 169/249 (67.87%), Postives = 196/249 (78.71%), Query Frame = 2
Query:   71 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN--LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYTGKV 808
            MA  IT + AR+I DSRGNPTVEVD+ T+ G + RAAVPSGASTGIYEALELRD   S YLGKGV KA+ N+N II P L G + TEQ  IDN MV++LDG+ NEWGW K KLGANAILA+S+AVC+AGA   K+ LYK++A+L+G K+  +VLPVP  NVINGGSHAGNKL+ QEFMI+PVGA  FKEA++ G EVYH LK+ IKKKYG DATNVGDEGGFAPNI    E L+LL TAI  AGY GKV
Sbjct:    1 MAHVITRINAREILDSRGNPTVEVDLETNLG-IFRAAVPSGASTGIYEALELRDNDKSRYLGKGVQKAIKNINEIIAPKLIGMNCTEQKKIDNLMVEELDGSKNEWGWSKSKLGANAILAISMAVCRAGAAPNKVSLYKYLAQLAGKKSDQMVLPVPCLNVINGGSHAGNKLSFQEFMIVPVGAPSFKEALRYGAEVYHTLKSEIKKKYGIDATNVGDEGGFAPNILNANEALDLLVTAIKSAGYEGKV 248          
BLAST of CB294002 vs. ExPASy Swiss-Prot
Match: ENOA_PYTRG (Alpha-enolase OS=Python regius PE=2 SV=3)

HSP 1 Score: 325.479 bits (833), Expect = 2.204e-88
Identity = 172/248 (69.35%), Postives = 201/248 (81.05%), Query Frame = 2
Query:   77 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPT--EQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYTGKVV 811
            ++I  ++AR+IFDSRGNPT+EVD+ T  G + RAAVPSGASTGIYEALELRD     +LGKGVSKAV +VN  I PAL  K+ +  EQ  ID  M++ +DG+ N     K K GANAIL VSLAVCKAGA  K IPLY+HIA+L+GNK ++LPVPAFNVINGGSHAGNKLAMQEFMILP+GA CFKEAM++G EVYH+LK VIK+KYG+DATNVGDEGGFAPNI ENKE LELL TAI+KAGY  K+V
Sbjct:    1 MSILKIQAREIFDSRGNPTIEVDLYTKKG-LFRAAVPSGASTGIYEALELRDNDKTRFLGKGVSKAVEHVNKTIAPALVNKNVSVVEQEKIDKLMIE-MDGSEN-----KSKFGANAILGVSLAVCKAGAAEKDIPLYRHIADLAGNKEVILPVPAFNVINGGSHAGNKLAMQEFMILPIGAECFKEAMRIGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILENKEALELLKTAISKAGYADKIV 241          
BLAST of CB294002 vs. ExPASy Swiss-Prot
Match: ENO2_TOXGO (Enolase 2 OS=Toxoplasma gondii GN=ENO2 PE=1 SV=1)

HSP 1 Score: 323.939 bits (829), Expect = 6.413e-88
Identity = 168/247 (68.02%), Postives = 194/247 (78.54%), Query Frame = 2
Query:   77 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN--LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYTGKV 808
            + I  + ARQI DSRGNPTVEVD+ T DG   RAAVPSGASTGIYEALELRD   + ++GKGV KAV N++ II PAL GKDP +Q  ID  MV++LDGT NEWGWCK KLGANAILAVS+A C+AGA  K +PLYK+IA L+GN    +V+PVP FNVINGGSHAGNK+AMQEFMI PVGAS  +EA+++G EVY HLK VIKKKYG DATNVGDEGGFAPNI    E L+LL  AI  +G+ GKV
Sbjct:    2 VAIKDITARQILDSRGNPTVEVDLLT-DGGCFRAAVPSGASTGIYEALELRDKDQTKFMGKGVMKAVENIHKIIKPALIGKDPCDQKGIDKLMVEELDGTKNEWGWCKSKLGANAILAVSMACCRAGAAAKGMPLYKYIATLAGNPTDKMVMPVPFFNVINGGSHAGNKVAMQEFMIAPVGASTIQEAIQIGAEVYQHLKVVIKKKYGLDATNVGDEGGFAPNISGATEALDLLMEAIKVSGHEGKV 247          
The following BLAST results are available for this feature:
BLAST of CB294002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_LOLPE9.894e-8970.85Enolase OS=Loligo pealeii PE=2 SV=1[more]
ENOA_MACFA9.894e-8970.97Alpha-enolase OS=Macaca fascicularis GN=ENO1 PE=2 ... [more]
ENO_PLAFG1.292e-8867.87Enolase OS=Plasmodium falciparum (isolate FCR-3 / ... [more]
ENO_PLAF71.292e-8867.87Enolase OS=Plasmodium falciparum (isolate 3D7) GN=... [more]
ENO_FASHE1.292e-8870.33Enolase OS=Fasciola hepatica GN=ENO PE=2 SV=1[more]
ENOA_PONAB1.292e-8870.56Alpha-enolase OS=Pongo abelii GN=ENO1 PE=2 SV=1[more]
ENOA_HUMAN1.292e-8870.56Alpha-enolase OS=Homo sapiens GN=ENO1 PE=1 SV=2[more]
ENO_PLAFA2.204e-8867.87Enolase OS=Plasmodium falciparum GN=ENO PE=3 SV=1[more]
ENOA_PYTRG2.204e-8869.35Alpha-enolase OS=Python regius PE=2 SV=3[more]
ENO2_TOXGO6.413e-8868.02Enolase 2 OS=Toxoplasma gondii GN=ENO2 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_05df06_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05df06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB294002 ID=CB294002; Name=CB294002; organism=Citrus sinensis; type=EST; length=813bp
GCCCGTAGATCGCACTCACAGACTCTCTCTCTCGTTCTAGATCTTTCTTC
GGTTTTCCAGTTTTCAGAAAATGGCAATAACCATCACTGCCGTCAAAGCC
AGGCAGATCTTTGACAGCCGTGGAAATCCAACGGTGGAGGTCGACGTGAC
AACATCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAAGCGGTGCATCCA
CCGGAATTTATGAGGCGCTTGAACTAAGAGACGGAGGCTCTGATTACCTA
GGCAAGGGTGTATCGAAAGCTGTTAGCAATGTCAACGCCATCATTGGCCC
TGCACTCGCTGGCAAGGACCCAACTGAGCAGACTGCTATTGACAACTATA
TGGTACAACAACTTGATGGAACTGTAAATGAGTGGGGTTGGTGCAAACAG
AAGCTTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGCTGTCTGCAAGGC
TGGTGCACATGTCAAGAAGATTCCTCTTTACAAGCATATTGCCGAACTCT
CTGGTAACAAGAATTTGGTGTTGCCAGTGCCAGCATTCAATGTCATTAAT
GGTGGATCACATGCTGGAAACAAACTTGCTATGCAGGAGTTTATGATTCT
TCCTGTAGGAGCTTCCTGTTTCAAAGAAGCCATGAAGATGGGTGTAGAAG
TATATCACCATCTGAAGGCTGTGATTAAAAAGAAATACGGCCAGGATGCT
ACAAATGTTGGTGATGAAGGCGGTTTTGCTCCCAATATTCAGGAGAACAA
GGAAGGACTTGAATTGCTCAACACAGCCATTGCTAAAGCCGGTTACACAG
GCAAAGTTGTCAT
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