CB294003

Overview
NameCB294003
Unique NameCB294003
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length792
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB294003 vs. ExPASy Swiss-Prot
Match: QAY_NEUAF (Quinate permease OS=Neurospora africana GN=qa-y PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.982e-14
Identity = 63/211 (29.86%), Postives = 96/211 (45.50%), Query Frame = 2
Query:  203 PQKKPKRNLYASGAAILASMTSILLGYD---IGVMSGAALYIKDDLKVSDTKIEILM---GILNIY---SLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAF----LMGGRFVAGIGVGYALMIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGF--SKLPLHLGWRMMLGIGAIPSVLLAVGVLAMPESPRW 790
            P  K   N      A +AS  S ++GYD   IG       + K+    S T   + +    I+++Y   +  GSL A  TS ++GRR +++                         ++ GR +AGIGVG A  + P+Y +EL+P + RG L    E+    G L+G+  NYG   +  P    W +   +  IP+ LL +G   +PESPRW
Sbjct:   11 PTPKAVYNWRVYTCAAIASFASCMIGYDSSFIGTTLALPSFTKEFDFASYTPGALALLQSNIVSVYQAGAFFGSLFAFATSYFLGRRRSLIAFSVVFIIGAAIMLAADGQRRGVDPIIAGRVLAGIGVGGASNMVPIYISELAPPAVRGRLVGIYELGWQIGGLVGFWINYGVNTTMAPTRSQWLIPFAVQLIPAGLLFLGSFWIPESPRW 221          
BLAST of CB294003 vs. ExPASy Swiss-Prot
Match: HXT16_YEAST (Hexose transporter HXT16 OS=Saccharomyces cerevisiae GN=HXT16 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.982e-14
Identity = 50/192 (26.04%), Postives = 94/192 (48.96%), Query Frame = 2
Query:  257 SMTSILLGYDIGVMSG------------AALYIKDDLKVSDTKIEILMGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTN--YAFLMGGRFVAGIGVGYALMIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLGWRMMLGIGAIPSVLLAVGVLAMPESPRW 790
            S    L G+D G+ +G            +  +   +  +S+ ++ +L+ + ++   IG +A  R +D +GRR  IV                 +  Y + +G + + G+G G   ++ P+  +E++P   RG L S  ++ +  GI LGY S YG  K      WR+ +G+  + ++++ VG+L +PESPR+
Sbjct:   68 SFGGFLPGWDSGITAGFINMDNFKMNFGSYKHSTGEYYLSNVRMGLLVAMFSVGCSIGGVAFARLADTLGRRLAIVIVVLVYMVGAIIQISSNHKWYQYFVG-KIIYGLGAGGCSVLCPMLLSEIAPTDLRGGLVSLYQLNMTFGIFLGYCSVYGTRKYSNTAQWRIPVGLCFLWALIIIVGMLLVPESPRY 258          
BLAST of CB294003 vs. ExPASy Swiss-Prot
Match: HXT15_YEAST (Hexose transporter HXT15 OS=Saccharomyces cerevisiae GN=HXT15 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.982e-14
Identity = 50/192 (26.04%), Postives = 94/192 (48.96%), Query Frame = 2
Query:  257 SMTSILLGYDIGVMSG------------AALYIKDDLKVSDTKIEILMGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTN--YAFLMGGRFVAGIGVGYALMIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLGWRMMLGIGAIPSVLLAVGVLAMPESPRW 790
            S    L G+D G+ +G            +  +   +  +S+ ++ +L+ + ++   IG +A  R +D +GRR  IV                 +  Y + +G + + G+G G   ++ P+  +E++P   RG L S  ++ +  GI LGY S YG  K      WR+ +G+  + ++++ VG+L +PESPR+
Sbjct:   68 SFGGFLPGWDSGITAGFINMDNFKMNFGSYKHSTGEYYLSNVRMGLLVAMFSVGCSIGGVAFARLADTLGRRLAIVIVVLVYMVGAIIQISSNHKWYQYFVG-KIIYGLGAGGCSVLCPMLLSEIAPTDLRGGLVSLYQLNMTFGIFLGYCSVYGTRKYSNTAQWRIPVGLCFLWALIIIVGMLLVPESPRY 258          
BLAST of CB294003 vs. ExPASy Swiss-Prot
Match: HUP1_CHLKE (H(+)/hexose cotransporter 1 OS=Chlorella kessleri GN=HUP1 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 9.982e-14
Identity = 58/209 (27.75%), Postives = 91/209 (43.54%), Query Frame = 2
Query:  227 LYASGAAILASMTSILLGYDIGVMSGAALYIKDDLKV--------------------SDTKIEILMGILNIYSLIGSL-AAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGIGVGYALMIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLGWRMMLGIGAIPSVLLAVGVLAMPESPRW 790
            +Y    A +A+   +LLGYD GV  G       + K                      + K+++ +  L +  L+  L A+  T +W GR+ T+                  + A L+ GR + G GVG    + P Y +E++P S RG L    ++F+  GIL+  + NY         GWR+ LG  A P  +L +G L +PESP +
Sbjct:   25 VYVVMVAFMAACGGLLLGYDNGVTGGVVSLEAFEKKFFPDVWAKKQEVHEDSPYCTYDNAKLQLFVSSLFLAGLVSCLFASWITRNW-GRKVTMGIGGAFFVAGGLVNAFAQDMAMLIVGRVLLGFGVGLGSQVVPQYLSEVAPFSHRGMLNIGYQLFVTIGILIAGLVNYAVR--DWENGWRLSLGPAAAPGAILFLGSLVLPESPNF 230          
BLAST of CB294003 vs. ExPASy Swiss-Prot
Match: GTR8_RAT (Solute carrier family 2, facilitated glucose transporter member 8 OS=Rattus norvegicus GN=Slc2a8 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.304e-13
Identity = 54/211 (25.59%), Postives = 95/211 (45.02%), Query Frame = 2
Query:  167 DPQNQKTLADFDPQKKP--KRNLYASGAAILASMT-SILLGYDIGVMSGAALYIKDDLKVSDTKIEILMGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGIGVGYALMIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLGWRMMLGIGAIPSVLLAVGVLAMPESPRW 790
            DPQ  + L      + P  +R   A+ AA L  ++    LGY    +          L++ DT       ++ + +  G +  G   D  GR+ +++                 +   L+GGR + G+  G A ++APVY +E++  + RG L S  ++ +  GILL YV+ +        L WR +  +G +P  L+ + +  MPE+PR+
Sbjct:    5 DPQETQPLLRSPGARAPGGRRVFLATFAAALGPLSFGFALGYSSPAIPSLRRTAPPALRLGDTAASWFGAVVTLGAAAGGVLGGWLLDRAGRKLSLLLCTVPFVTGFAVITAARDVWMLLGGRLLTGLACGVASLVAPVYISEIAYPAVRGLLGSCVQLMVVTGILLAYVAGW-------VLEWRWLAVLGCVPPTLMLLLMCYMPETPRF 208          
BLAST of CB294003 vs. ExPASy Swiss-Prot
Match: XYLE_ECOLI (D-xylose-proton symporter OS=Escherichia coli (strain K12) GN=xylE PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.224e-13
Identity = 65/218 (29.82%), Postives = 94/218 (43.12%), Query Frame = 2
Query:  230 YASGAAILASMTSILLGYDIGVMSGAALYIKDDL----KVSDTKIEILMGILNIYSLIGSLAAGRT----SDWIGRRYTI-----------VXXXXXXXXXXXXXXXXTNYAFLMGG-------RFVAGIGVGYALMIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNY-----GFSKLPLHLGWRMMLGIGAIPSVLLAVGVLAMPESPRW 790
            Y     ++A++  +L GYD  V+SG    +         +S++    L+G     +LIG +  G      S+  GRR ++           V                T   +L G        R + GIGVG A M++P+Y AEL+PA  RG L SF +  I  G LL Y  NY     G +      GWR M     IP++L  + +  +PESPRW
Sbjct:    9 YIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRW 226          
BLAST of CB294003 vs. ExPASy Swiss-Prot
Match: XYLE_ECO57 (D-xylose-proton symporter OS=Escherichia coli O157:H7 GN=xylE PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.224e-13
Identity = 65/218 (29.82%), Postives = 94/218 (43.12%), Query Frame = 2
Query:  230 YASGAAILASMTSILLGYDIGVMSGAALYIKDDL----KVSDTKIEILMGILNIYSLIGSLAAGRT----SDWIGRRYTI-----------VXXXXXXXXXXXXXXXXTNYAFLMGG-------RFVAGIGVGYALMIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNY-----GFSKLPLHLGWRMMLGIGAIPSVLLAVGVLAMPESPRW 790
            Y     ++A++  +L GYD  V+SG    +         +S++    L+G     +LIG +  G      S+  GRR ++           V                T   +L G        R + GIGVG A M++P+Y AEL+PA  RG L SF +  I  G LL Y  NY     G +      GWR M     IP++L  + +  +PESPRW
Sbjct:    9 YIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRW 226          
BLAST of CB294003 vs. ExPASy Swiss-Prot
Match: HUP2_CHLKE (H(+)/hexose cotransporter 2 OS=Chlorella kessleri GN=HUP2 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.224e-13
Identity = 55/208 (26.44%), Postives = 91/208 (43.75%), Query Frame = 2
Query:  224 NLYASGAAILASMTSILLGYDIGVMSGA------------ALYIK----DDLK-----VSDTKIEILMGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGIGVGYALMIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLGWRMMLGIGAIPSVLLAVGVLAMPESP 784
            N Y    A+ A    +L GYDIGV  G             ++Y +     D K       D K+++      +  +  S  AG      GR+ T++                 + A L+ GR + G GVG      P+Y +E +P   RG L    ++ +  GI++  + NYG     ++ GWR+ LG+  +P+++L +G L +PE+P
Sbjct:   26 NWYIFIVALTAGSGGLLFGYDIGVTGGVTSMPEFLQKFFPSIYDRTQQPSDSKDPYCTYDDQKLQLFTSSFFLAGMFVSFFAGSVVRRWGRKPTMLIASVLFLAGAGLNAGAQDLAMLVIGRVLLGFGVGGGNNAVPLYLSECAPPKYRGGLNMMFQLAVTIGIIVAQLVNYGTQ--TMNNGWRLSLGLAGVPAIILLIGSLLLPETP 231          
BLAST of CB294003 vs. ExPASy Swiss-Prot
Match: GAL2_YEAST (Galactose transporter OS=Saccharomyces cerevisiae GN=GAL2 PE=1 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 2.224e-13
Identity = 53/209 (25.36%), Postives = 93/209 (44.50%), Query Frame = 2
Query:  203 PQKKPKRNLYASGAAILASMTSILLGYDIGVMSGAALYI----------KDDLK-VSDTKIEILMGILNIYSLIGSLAAGRTSDWIGRR--YTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGIGVGYALMIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLGWRMMLGIGAIPSVLLAVGVLAMPESPRW 790
            P+K     +  S   +  +    + G+D G +SG  +            KD    +S+ +  +++ I NI    G +   +  D  GR+   +IV                  Y + +G R ++G+GVG   ++ P+  +E++P   RG L S  ++ I  GI LGY +NYG       + WR+ LG+    S+ +   +  +PESPR+
Sbjct:   61 PKKPMSEYVTVSLLCLCVAFGGFMFGWDTGTISGFVVQTDFLRRFGMKHKDGTHYLSNVRTGLIVAIFNIGCAFGGIILSKGGDMYGRKKGLSIVVSVYIVGIIIQIASINKWYQYFIG-RIISGLGVGGIAVLCPMLISEIAPKHLRGTLVSCYQLMITAGIFLGYCTNYGTKSYSNSVQWRVPLGLCFAWSLFMIGALTLVPESPRY 268          
BLAST of CB294003 vs. ExPASy Swiss-Prot
Match: QAY_NEUCR (Quinate permease OS=Neurospora crassa GN=qa-y PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.904e-13
Identity = 62/211 (29.38%), Postives = 95/211 (45.02%), Query Frame = 2
Query:  203 PQKKPKRNLYASGAAILASMTSILLGYD---IGVMSGAALYIKDDLKVSDTKIEILM---GILNIY---SLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAF----LMGGRFVAGIGVGYALMIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGF--SKLPLHLGWRMMLGIGAIPSVLLAVGVLAMPESPRW 790
            P  K   N      A +AS  S ++GYD   IG       + K+    S T   + +    I+++Y   +  G L A  TS ++GRR +++                         ++ GR +AGIGVG A  + P+Y +EL+P + RG L    E+    G L+G+  NYG   +  P    W +   +  IP+ LL +G   +PESPRW
Sbjct:   11 PTPKAVYNWRVYTCAAIASFASCMIGYDSAFIGTTLALPSFTKEFDFASYTPGALALLQSNIVSVYQAGAFFGCLFAYATSYFLGRRKSLIAFSVVFIIGAAIMLAADGQGRGIDPIIAGRVLAGIGVGGASNMVPIYISELAPPAVRGRLVGIYELGWQIGGLVGFWINYGVNTTMAPTRSQWLIPFAVQLIPAGLLFLGSFWIPESPRW 221          
The following BLAST results are available for this feature:
BLAST of CB294003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
QAY_NEUAF9.982e-1429.86Quinate permease OS=Neurospora africana GN=qa-y PE... [more]
HXT16_YEAST9.982e-1426.04Hexose transporter HXT16 OS=Saccharomyces cerevisi... [more]
HXT15_YEAST9.982e-1426.04Hexose transporter HXT15 OS=Saccharomyces cerevisi... [more]
HUP1_CHLKE9.982e-1427.75H(+)/hexose cotransporter 1 OS=Chlorella kessleri ... [more]
GTR8_RAT1.304e-1325.59Solute carrier family 2, facilitated glucose trans... [more]
XYLE_ECOLI2.224e-1329.82D-xylose-proton symporter OS=Escherichia coli (str... [more]
XYLE_ECO572.224e-1329.82D-xylose-proton symporter OS=Escherichia coli O157... [more]
HUP2_CHLKE2.224e-1326.44H(+)/hexose cotransporter 2 OS=Chlorella kessleri ... [more]
GAL2_YEAST2.224e-1325.36Galactose transporter OS=Saccharomyces cerevisiae ... [more]
QAY_NEUCR2.904e-1329.38Quinate permease OS=Neurospora crassa GN=qa-y PE=3... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_05dg04_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05dg04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB294003 ID=CB294003; Name=CB294003; organism=Citrus sinensis; type=EST; length=792bp
GTCTTGTTTTTGTAGTAGTTTCATGGCAGCTTGAGTTTCTATCTCTTCTT
CCAAACCCTAGCTTACATAATTAAACACTCGCAGTCTCTCTCTCTCTCGC
TCTCTAGCTAGCTAGCTTAGCAACAACATGGCTGCAGGCTTGGGAACCGA
GAGCAACAACAATACTGACCCTCAAAACCAAAAAACTCTTGCGGATTTTG
ATCCCCAAAAGAAACCAAAAAGAAATCTGTATGCCTCCGGCGCTGCCATT
TTGGCTTCCATGACTTCAATCTTACTAGGTTATGACATTGGAGTAATGAG
TGGAGCTGCACTCTACATCAAAGACGACTTGAAAGTCAGTGACACAAAAA
TCGAGATCTTAATGGGAATCTTGAATATTTACTCACTCATCGGCTCACTG
GCTGCCGGCAGAACCTCCGACTGGATTGGCCGCCGGTACACTATCGTGTT
AGCCGGGGCCATCTTCTTCGCCGGAGCGCTGCTCATGGGGTTCGCCACAA
ACTACGCTTTCCTCATGGGGGGTCGCTTCGTCGCCGGTATCGGCGTCGGA
TACGCTCTCATGATCGCTCCCGTTTACACAGCTGAACTTTCTCCGGCTTC
TACTCGAGGCTTTCTCACCTCATTTCCTGAGGTTTTCATTAACGGCGGGA
TATTACTTGGCTACGTCTCGAACTACGGATTCTCCAAACTACCCCTCCAC
TTAGGCTGGCGCATGATGCTCGGAATCGGCGCCATTCCGTCGGTGCTTCT
CGCCGTCGGCGTGTTAGCCATGCCAGAATCTCCGCGCTGGCT
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