CB294007
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UB2E2_HUMAN (Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens GN=UBE2E2 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.567e-16 Identity = 46/147 (31.29%), Postives = 75/147 (51.02%), Query Frame = 1 Query: 121 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFKKKVSRCVRR 561 ++ +P SAG + NI+EW TI+GPP ++YEGG F ++F +YP PP V F T+I+H N+ G +C+ IL + W P T+ +++LSI S+L+ N P A ++ R + + + +R Sbjct: 66 EITLDPPPNCSAGPKGD-NIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDIL-------------KDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKR 198
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBC13_SCHPO (Ubiquitin-conjugating enzyme E2 13 OS=Schizosaccharomyces pombe GN=ubc13 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.046e-16 Identity = 43/131 (32.82%), Postives = 71/131 (54.20%), Query Frame = 1 Query: 124 LCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRD 516 L ++P G A ++ N+ + +T+ GP + YEGG F+ + P YP PP V+F TKI+HPNV GR+C+S L + W P + ++LSI +++ +PN + P + + AK W++ Sbjct: 14 LTRDPPPGIVAAPTED-NLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKLGRICLSTL-------------KKDWSPALQIRTVLLSIQALMGAPNPDDPLDNDVAKIWKE 130
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBE2N_DICDI (Probable ubiquitin-conjugating enzyme E2 N OS=Dictyostelium discoideum GN=ube2n PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 5.954e-16 Identity = 45/130 (34.62%), Postives = 68/130 (52.31%), Query Frame = 1 Query: 124 LCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWR 513 L P G SA + N + V I GP D+ +EGG FN + +YP S P V+F TKI+HPN+ GR+C+ IL ++W P + ++LSI ++LS+PN + P + A+ W+ Sbjct: 15 LMTEPAPGISATPATD-NFRYFKVAISGPLDSPFEGGVFNLELFLTDDYPMSAPKVRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEHWK 130
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UB2L3_PONAB (Ubiquitin-conjugating enzyme E2 L3 OS=Pongo abelii GN=UBE2L3 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.954e-16 Identity = 40/136 (29.41%), Postives = 70/136 (51.47%), Query Frame = 1 Query: 163 VDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFKKKVSRCVRRSQE 570 VDE N+ W I+ P + Y+ G F ++FP+ YP PP + F TKI+HPN+ G+VC+ + +++E W P ++++ S+I++++ P E P + A+E+ R F K ++ E Sbjct: 27 VDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPV------------ISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGE 149
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UB2L3_MOUSE (Ubiquitin-conjugating enzyme E2 L3 OS=Mus musculus GN=Ube2l3 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.954e-16 Identity = 40/136 (29.41%), Postives = 70/136 (51.47%), Query Frame = 1 Query: 163 VDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFKKKVSRCVRRSQE 570 VDE N+ W I+ P + Y+ G F ++FP+ YP PP + F TKI+HPN+ G+VC+ + +++E W P ++++ S+I++++ P E P + A+E+ R F K ++ E Sbjct: 27 VDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPV------------ISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGE 149
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UB2L3_HUMAN (Ubiquitin-conjugating enzyme E2 L3 OS=Homo sapiens GN=UBE2L3 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.954e-16 Identity = 40/136 (29.41%), Postives = 70/136 (51.47%), Query Frame = 1 Query: 163 VDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFKKKVSRCVRRSQE 570 VDE N+ W I+ P + Y+ G F ++FP+ YP PP + F TKI+HPN+ G+VC+ + +++E W P ++++ S+I++++ P E P + A+E+ R F K ++ E Sbjct: 27 VDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPV------------ISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGE 149
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UB2L3_BOVIN (Ubiquitin-conjugating enzyme E2 L3 OS=Bos taurus GN=UBE2L3 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.954e-16 Identity = 40/136 (29.41%), Postives = 70/136 (51.47%), Query Frame = 1 Query: 163 VDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFKKKVSRCVRRSQE 570 VDE N+ W I+ P + Y+ G F ++FP+ YP PP + F TKI+HPN+ G+VC+ + +++E W P ++++ S+I++++ P E P + A+E+ R F K ++ E Sbjct: 27 VDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPV------------ISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGE 149
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBCD2_DROME (Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster GN=UbcD2 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.776e-16 Identity = 44/136 (32.35%), Postives = 70/136 (51.47%), Query Frame = 1 Query: 121 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDD 528 ++ +P SAG + N++EW TI+GPP ++YEGG F + F YP PP V F T+I+H N+ G +C+ IL + W P T+ +++LSI S+L+ N P A ++ R++ Sbjct: 97 EITLDPPPNCSAGPKGD-NLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDIL-------------KDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLQNREE 218
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBC1_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC1 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.776e-16 Identity = 45/143 (31.47%), Postives = 70/143 (48.95%), Query Frame = 1 Query: 133 NPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYP-DGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFKKKVSRCVR 558 +P A + V E++I T +GPP T YEGG F + P YP PP ++F TK++HPN+ G +C+ IL W PV T++ ++S+ ++L SP P + E A+ + R+ F K + R Sbjct: 17 DPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDIL-------------KNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTR 146
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBC13_YEAST (Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae GN=UBC13 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.016e-15 Identity = 46/139 (33.09%), Postives = 69/139 (49.64%), Query Frame = 1 Query: 124 LCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFKKK 540 L +PV G +A D+ N+ + VTI GP + YE G F + P +YP P V+F TKI+HPN+ GR+C+ +L W P + ++LSI ++L+SPN P + A++W K K Sbjct: 15 LVSDPVPGITAEPHDD-NLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLDVL-------------KTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAK 139 The following BLAST results are available for this feature:
BLAST of CB294007 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 221
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB294007 ID=CB294007; Name=CB294007; organism=Citrus sinensis; type=EST; length=660bpback to top |