CB294007
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBE2F_XENLA (NEDD8-conjugating enzyme UBE2F OS=Xenopus laevis GN=ube2f PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.241e-13 Identity = 38/121 (31.40%), Postives = 63/121 (52.07%), Query Frame = 1 Query: 202 IGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSS-PNDESPANVEAAKEWRDRRDDFKKKVSRCVRR 561 + P ++ Y+GG F + P Y PP VK T+IWHPN+ G +C+S+L D G W P T++ +V + S+ + N + P N+EAA+ +D+++ KV ++R Sbjct: 69 VSPDESYYQGGRFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTG-------WAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKDEYRNKVEDYIKR 182
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBCD4_DROME (Ubiquitin-conjugating enzyme E2-22 kDa OS=Drosophila melanogaster GN=UbcD4 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.241e-13 Identity = 38/112 (33.93%), Postives = 60/112 (53.57%), Query Frame = 1 Query: 199 IIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYP-DGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDF 531 I GPPDT YEGG F + P YP +PP V+F T+IWHPN+ G +C+ IL + W T+ ++LS+ ++L++ + P + A +++D+ D F Sbjct: 43 IAGPPDTPYEGGKFVLEIKVPETYPFNPPKVRFITRIWHPNISSVTGAICLDIL-------------KDNWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVAYQFKDKYDLF 141
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBC12_DICDI (NEDD8-conjugating enzyme Ubc12 OS=Dictyostelium discoideum GN=ube2m PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.241e-13 Identity = 39/138 (28.26%), Postives = 69/138 (50.00%), Query Frame = 1 Query: 145 GFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFKKKVSRCVR 558 G + D +I ++++I P D LY+ F ++ PS YP PP V T ++HPN+ +G VC++IL + WMPV + ++ ++++ PN + P N +AA+ D + F+ V + +R Sbjct: 94 GCAVSFKDTNDILNFNLSIT-PTDGLYQSATFQFTINIPSTYPYDPPKVHCDTLVYHPNIDLEGHVCLNILR-------------QDWMPVLNIGTVIFGLMTLFLEPNPDDPLNKDAAQLMIDNKKTFEANVRQSLR 217
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBE2S_DROVI (Ubiquitin-conjugating enzyme E2 S OS=Drosophila virilis GN=GJ15767 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.621e-13 Identity = 43/140 (30.71%), Postives = 70/140 (50.00%), Query Frame = 1 Query: 121 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFKKK 540 D+ P G L++E+++ + I GP T Y G F ++ ++P +PP F TKI+HPNV +G +C++ L + W P ++ I+L+I +L PN ES N EA K +R DD+ ++ Sbjct: 25 DMETTPPEGIKV-LINESDVTDIQAFIDGPAGTPYAVGVFRVKLTLSKDFPQTPPKAYFLTKIFHPNVASNGEICVNTL-------------KKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQR 150
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBE2S_DROSI (Ubiquitin-conjugating enzyme E2 S OS=Drosophila simulans GN=GD17343 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.621e-13 Identity = 40/127 (31.50%), Postives = 66/127 (51.97%), Query Frame = 1 Query: 160 LVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFKKK 540 L++E+++ + I GP T Y G F ++ ++P +PP F TKI+HPNV +G +C++ L + W P ++ I+L+I +L PN ES N EA K +R DD+ ++ Sbjct: 37 LINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTL-------------KKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQR 150
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBE2S_DROSE (Ubiquitin-conjugating enzyme E2 S OS=Drosophila sechellia GN=GM13299 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.621e-13 Identity = 40/127 (31.50%), Postives = 66/127 (51.97%), Query Frame = 1 Query: 160 LVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFKKK 540 L++E+++ + I GP T Y G F ++ ++P +PP F TKI+HPNV +G +C++ L + W P ++ I+L+I +L PN ES N EA K +R DD+ ++ Sbjct: 37 LINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTL-------------KKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQR 150
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBE2S_DROPS (Ubiquitin-conjugating enzyme E2 S OS=Drosophila pseudoobscura pseudoobscura GN=GA22810 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.621e-13 Identity = 40/127 (31.50%), Postives = 66/127 (51.97%), Query Frame = 1 Query: 160 LVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFKKK 540 L++E+++ + I GP T Y G F ++ ++P +PP F TKI+HPNV +G +C++ L + W P ++ I+L+I +L PN ES N EA K +R DD+ ++ Sbjct: 37 LINESDVTDIQALIDGPAGTPYAVGIFRVKLTLSKDFPQTPPKAYFLTKIFHPNVAGNGEICVNTL-------------KKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQR 150
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBE2S_DROPE (Ubiquitin-conjugating enzyme E2 S OS=Drosophila persimilis GN=GL16001 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.621e-13 Identity = 40/127 (31.50%), Postives = 66/127 (51.97%), Query Frame = 1 Query: 160 LVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFKKK 540 L++E+++ + I GP T Y G F ++ ++P +PP F TKI+HPNV +G +C++ L + W P ++ I+L+I +L PN ES N EA K +R DD+ ++ Sbjct: 37 LINESDVTDIQALIDGPAGTPYAVGIFRVKLTLSKDFPQTPPKAYFLTKIFHPNVAGNGEICVNTL-------------KKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQR 150
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBE2S_DROME (Ubiquitin-conjugating enzyme E2 S OS=Drosophila melanogaster GN=CG8188 PE=1 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.621e-13 Identity = 40/127 (31.50%), Postives = 66/127 (51.97%), Query Frame = 1 Query: 160 LVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFKKK 540 L++E+++ + I GP T Y G F ++ ++P +PP F TKI+HPNV +G +C++ L + W P ++ I+L+I +L PN ES N EA K +R DD+ ++ Sbjct: 37 LINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTL-------------KKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQR 150
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBC12_DROME (NEDD8-conjugating enzyme Ubc12 OS=Drosophila melanogaster GN=CG7375 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.621e-13 Identity = 42/120 (35.00%), Postives = 57/120 (47.50%), Query Frame = 1 Query: 199 IIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFKKKVSRCVR 558 II P + Y G F SNYP+ PP VK T+++HPN+ DG VC++IL E W PV + IV + + PN E P N EAA + R F+ V + +R Sbjct: 60 IISPDEGFYRDGRFVFNFRVGSNYPHEPPKVKCATQVYHPNIDLDGNVCLNILR-------------EDWNPVLNINSIVYGLQFLFLEPNPEDPLNKEAADVLQTNRRQFENNVKKAMR 166 The following BLAST results are available for this feature:
BLAST of CB294007 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 221
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Sequences
The
following sequences are available for this feature:
EST sequence >CB294007 ID=CB294007; Name=CB294007; organism=Citrus sinensis; type=EST; length=660bpback to top |