CB294007
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBC15_ARATH (Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana GN=UBC15 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.058e-12 Identity = 40/121 (33.06%), Postives = 62/121 (51.24%), Query Frame = 1 Query: 133 NPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKI-WHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISML-SSPNDESPAN 489 NP GF + D N+ +W++ + G P TLY + + FP +YP P V F + HP++Y +G +C+ IL+ + W P TV + +SI+SML SSP + PA+ Sbjct: 30 NPPTGFRHKVTD--NLQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILY-------------DSWSPAMTVNSVCISILSMLSSSPAKQRPAD 135
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBC12_CANGA (NEDD8-conjugating enzyme UBC12 OS=Candida glabrata GN=UBC12 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.058e-12 Identity = 41/116 (35.34%), Postives = 58/116 (50.00%), Query Frame = 1 Query: 160 LVDETNIFEWSVTIIGPPDT-LYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAK 504 ++ N E S+ II PD Y+GG F +F YP PP V KI+HPN+ P G++C++IL E W P ++ IVL ++S+ PN P N EAA+ Sbjct: 54 IISLDNHKEMSLNIIIIPDEGFYKGGKFRFTATFLETYPIDPPKVICNNKIFHPNIDPHGKICLNILR-------------EDWSPALDLQCIVLGLLSLFQEPNGNDPLNKEAAE 156
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UB2L6_HUMAN (Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Homo sapiens GN=UBE2L6 PE=1 SV=4) HSP 1 Score: 72.0182 bits (175), Expect = 3.058e-12 Identity = 42/147 (28.57%), Postives = 67/147 (45.58%), Query Frame = 1 Query: 121 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFKKKVSRCVRR 561 DL K P D+ N+ W ++ P Y FN +SFP YP PP +KFTTKI+HPNV +G++C+ I ++SE W P +++ ++ +++ PN P ++ A + F+K R Sbjct: 13 DLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVDENGQICLPI------------ISSENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLR 146
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBE2W_MOUSE (Probable ubiquitin-conjugating enzyme E2 W OS=Mus musculus GN=Ube2w PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.993e-12 Identity = 41/101 (40.59%), Postives = 55/101 (54.46%), Query Frame = 1 Query: 169 ETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTK--IWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSS 465 + +I +W V + G P TLYEG F + F S YP P V FT + HP+VY +G +C+SIL +E W P +V+ + LSIISMLSS Sbjct: 31 QNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPIHPHVYSNGHICLSIL-------------TEDWSPALSVQSVCLSIISMLSS 118
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBE2W_HUMAN (Probable ubiquitin-conjugating enzyme E2 W OS=Homo sapiens GN=UBE2W PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.993e-12 Identity = 41/101 (40.59%), Postives = 55/101 (54.46%), Query Frame = 1 Query: 169 ETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTK--IWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSS 465 + +I +W V + G P TLYEG F + F S YP P V FT + HP+VY +G +C+SIL +E W P +V+ + LSIISMLSS Sbjct: 31 QNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSIL-------------TEDWSPALSVQSVCLSIISMLSS 118
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBE2S_RAT (Ubiquitin-conjugating enzyme E2 S OS=Rattus norvegicus GN=Ube2s PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.812e-12 Identity = 38/113 (33.63%), Postives = 57/113 (50.44%), Query Frame = 1 Query: 166 DETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAK 504 +E ++ + VTI GP T Y GG F + ++P SPP F TKI+HPNV P+G +C+++L W + ++L+I +L PN ES N EA + Sbjct: 36 NEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVL-------------KRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGR 135
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBE2S_MOUSE (Ubiquitin-conjugating enzyme E2 S OS=Mus musculus GN=Ube2s PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.812e-12 Identity = 38/113 (33.63%), Postives = 57/113 (50.44%), Query Frame = 1 Query: 166 DETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAK 504 +E ++ + VTI GP T Y GG F + ++P SPP F TKI+HPNV P+G +C+++L W + ++L+I +L PN ES N EA + Sbjct: 36 NEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVL-------------KRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGR 135
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBC16_ARATH (Probable ubiquitin carrier protein E2 16 OS=Arabidopsis thaliana GN=UBC16 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.812e-12 Identity = 39/116 (33.62%), Postives = 57/116 (49.14%), Query Frame = 1 Query: 133 NPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKI-WHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDE 477 NP GF + D N+ W + +IG P TLY + + FP +YP P V F HP++Y +G +C+ IL+ + W P TV I +SI+SMLSS ++ Sbjct: 30 NPPTGFKHKVTD--NLQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILY-------------DSWSPAMTVSSICISILSMLSSSTEK 130
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UB2SA_XENLA (Ubiquitin-conjugating enzyme E2 S-A OS=Xenopus laevis GN=ube2s-A PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.812e-12 Identity = 38/113 (33.63%), Postives = 57/113 (50.44%), Query Frame = 1 Query: 166 DETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAK 504 +E ++ + VTI GP T Y GG F + ++P SPP F TKI+HPNV P+G +C+++L W + ++L+I +L PN ES N EA + Sbjct: 36 NEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVL-------------KRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGR 135
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBC12_YARLI (NEDD8-conjugating enzyme UBC12 OS=Yarrowia lipolytica GN=UBC12 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.897e-12 Identity = 34/114 (29.82%), Postives = 57/114 (50.00%), Query Frame = 1 Query: 202 IGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFKKKV 543 + P + Y+GG F N+P+ PP VK K++HPN+ +G VC++IL E W PV ++ +++ + + PN P N +AA + R++FK+ V Sbjct: 59 VRPDEGFYQGGEFRFSFYVNPNFPHEPPKVKCLQKVYHPNIDLEGNVCLNILR-------------EDWKPVLSLNAVMIGLQYLFLEPNASDPLNKDAAHQMTANREEFKRNV 159 The following BLAST results are available for this feature:
BLAST of CB294007 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 221
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Sequences
The
following sequences are available for this feature:
EST sequence >CB294007 ID=CB294007; Name=CB294007; organism=Citrus sinensis; type=EST; length=660bpback to top |