CB294007
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UB2D2_MOUSE (Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus GN=Ube2d2 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.259e-22 Identity = 51/139 (36.69%), Postives = 81/139 (58.27%), Query Frame = 1 Query: 121 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFKK 537 DL ++P A SAG V + ++F W TI+GP D+ Y+GG F + FP++YP PP V FTT+I+HPN+ +G +C+ IL +W P T+ +++LSI S+L PN + P E A+ ++ R+ + + Sbjct: 12 DLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNR 136
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UB2D2_HUMAN (Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens GN=UBE2D2 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.259e-22 Identity = 51/139 (36.69%), Postives = 81/139 (58.27%), Query Frame = 1 Query: 121 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFKK 537 DL ++P A SAG V + ++F W TI+GP D+ Y+GG F + FP++YP PP V FTT+I+HPN+ +G +C+ IL +W P T+ +++LSI S+L PN + P E A+ ++ R+ + + Sbjct: 12 DLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNR 136
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UB2D2_BOVIN (Ubiquitin-conjugating enzyme E2 D2 OS=Bos taurus GN=UBE2D2 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.259e-22 Identity = 51/139 (36.69%), Postives = 81/139 (58.27%), Query Frame = 1 Query: 121 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFKK 537 DL ++P A SAG V + ++F W TI+GP D+ Y+GG F + FP++YP PP V FTT+I+HPN+ +G +C+ IL +W P T+ +++LSI S+L PN + P E A+ ++ R+ + + Sbjct: 12 DLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNR 136
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBC4_SCHPO (Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe GN=ubc4 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.560e-22 Identity = 52/147 (35.37%), Postives = 82/147 (55.78%), Query Frame = 1 Query: 121 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFKKKVSRCVRR 561 DL K+P + SAG V + ++F W TI+GP D+ Y GG F + FP++YP PP V FTT+I+HPN+ +G +C+ IL ++W P T+ +++LSI S+L+ PN + P E A ++ R ++ R+ Sbjct: 12 DLGKDPPSSCSAGPVGD-DLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILR-------------DQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHVYKTDRSRYELSAREWTRK 144
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBC12_ARATH (Probable ubiquitin-conjugating enzyme E2 12 OS=Arabidopsis thaliana GN=UBC12 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.560e-22 Identity = 51/147 (34.69%), Postives = 78/147 (53.06%), Query Frame = 1 Query: 121 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFKKKVSRCVRR 561 D+ ++P A SAG V E +IF W TI+GP D+ Y GG F + F S+YP PP V F TK++HPN+ G +C+ IL E+W P T +++LSI S+L+ PN P E A ++ + ++ + ++ Sbjct: 12 DMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPFKPPKVNFKTKVYHPNIDSKGSICLDIL-------------KEQWSPAPTTSKVLLSICSLLTDPNPNDPLVPEIAHLYKVDKSKYESTAQKWTQK 145
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UB2D3_BOVIN (Ubiquitin-conjugating enzyme E2 D3 OS=Bos taurus GN=UBE2D3 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.261e-22 Identity = 51/139 (36.69%), Postives = 80/139 (57.55%), Query Frame = 1 Query: 121 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFKK 537 DL ++P A SAG V + ++F W TI+GP D+ Y+GG F + FP++YP PP V FTT+I+HPN+ + +C+ IL +W P T+ +++LSI S+L PN + P E A+ ++ RD + + Sbjct: 12 DLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNDSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNR 136
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBE2C_SPISO (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.618e-21 Identity = 51/134 (38.06%), Postives = 72/134 (53.73%), Query Frame = 1 Query: 166 DETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFKKKVSRCVRRSQ 567 D N+F+W T+ GP DT+YE + + FPS+YP PP VKFTT WHPNV G +C+ IL E W + V I+LS+ S+L PN+ SP N +AA W + ++KK + + +Q Sbjct: 55 DGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDIL-------------KENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEYKKVLHEKYKTAQ 174
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.618e-21 Identity = 53/138 (38.41%), Postives = 77/138 (55.80%), Query Frame = 1 Query: 121 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFK 534 DL K+P SAG V E ++F W TI+GP D+ Y GG F + FP +YP PP V F TK++HPNV +G +C+ IL E+W P T+ +++LSI S+L+ PN + P E A ++ R ++ Sbjct: 12 DLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 135
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.113e-21 Identity = 51/138 (36.96%), Postives = 78/138 (56.52%), Query Frame = 1 Query: 121 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFK 534 DL K+P SAG V E ++F W TI+GP D+ Y GG F + FP +YP PP V F TK++HPN+ +G +C+ IL E+W P T+ +++LSI S+L+ PN + P E A ++ ++ ++ Sbjct: 12 DLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYE 135
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.604e-21 Identity = 52/138 (37.68%), Postives = 77/138 (55.80%), Query Frame = 1 Query: 121 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFK 534 DL K+P SAG V E ++F W TI+GP D+ Y GG F + FP +YP PP V F TK++HPN+ +G +C+ IL E+W P T+ +++LSI S+L+ PN + P E A ++ R ++ Sbjct: 12 DLQKDPPTSCSAGPVAE-DMFHWQATIMGPTDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 135 The following BLAST results are available for this feature:
BLAST of CB294007 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 221
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Sequences
The
following sequences are available for this feature:
EST sequence >CB294007 ID=CB294007; Name=CB294007; organism=Citrus sinensis; type=EST; length=660bpback to top |