CB294007
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.147e-21 Identity = 51/138 (36.96%), Postives = 77/138 (55.80%), Query Frame = 1 Query: 121 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFK 534 DL K+P SAG V E ++F W TI+GP ++ Y GG F + FP +YP PP V F TK++HPN+ +G +C+ IL E+W P T+ +++LSI S+L+ PN + P E A ++ R ++ Sbjct: 12 DLQKDPPTSCSAGPVAE-DMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 135
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.028e-21 Identity = 50/138 (36.23%), Postives = 78/138 (56.52%), Query Frame = 1 Query: 121 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFK 534 DL K+P SAG V E ++F W TI+GP ++ Y GG F + FP +YP PP V F TK++HPN+ +G +C+ IL E+W P T+ +++LSI S+L+ PN + P E A ++ ++ ++ Sbjct: 12 DLQKDPPTSCSAGPVAE-DMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYE 135
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBC9_SCHPO (SUMO-conjugating enzyme ubc9 OS=Schizosaccharomyces pombe GN=hus5 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.788e-20 Identity = 48/130 (36.92%), Postives = 71/130 (54.62%), Query Frame = 1 Query: 175 NIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFKKKVSRCVRRS 564 ++ W V I G P T +EGG + M+FP YP PP +FT ++HPNVYP G VC+SIL+ E W P T+++I+L I +L PN SPA EA ++ + +++K+V R + Sbjct: 37 DLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILN-----------EEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQAREN 155
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBE2C_DROME (Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.336e-20 Identity = 49/124 (39.52%), Postives = 72/124 (58.06%), Query Frame = 1 Query: 166 DETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFKK 537 D NIF+W TI GP +T+Y G + + FP++YP + P VKF T +HPNV G +C+ IL ++W ++ V I+LSI S+L PN+ESP N +AA W D++ ++KK Sbjct: 57 DGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPYAAPVVKFLTSCFHPNVDLQGAICLDIL-------------KDKWSALYDVRTILLSIQSLLGEPNNESPLNAQAAMMWNDQK-EYKK 166
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBC4_CANAL (Ubiquitin-conjugating enzyme E2 4 OS=Candida albicans GN=UBC4 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.984e-20 Identity = 47/138 (34.06%), Postives = 79/138 (57.25%), Query Frame = 1 Query: 121 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFK 534 DL ++P + SAG V + +++ W +I+GPPD+ Y GG F + FP++YP PP + TTKI+HPN+ +G +C+ IL ++W P T+ +++LSI S+L+ N + P E A ++ R ++ Sbjct: 12 DLGRDPPSSCSAGPVGD-DLYHWQASIMGPPDSPYAGGVFFLSIHFPTDYPLKPPKIALTTKIYHPNINSNGNICLDIL-------------KDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAHIYKQDRKKYE 135
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.204e-20 Identity = 49/134 (36.57%), Postives = 75/134 (55.97%), Query Frame = 1 Query: 121 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRR 522 DL ++P SAG + ++F+W TI+GP D+ + GG F + FP +YP PP V F TK++HPN+ +G +C+ IL E+W P TV +++LSI S+L+ PN + P E A ++ R Sbjct: 12 DLQRDPPVSCSAGPTGD-DMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDIL-------------KEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYKTDR 131
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBC5_YEAST (Ubiquitin-conjugating enzyme E2-16 kDa OS=Saccharomyces cerevisiae GN=UBC5 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.876e-20 Identity = 48/131 (36.64%), Postives = 76/131 (58.02%), Query Frame = 1 Query: 121 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWR 513 DL ++P A SAG V + +++ W +I+GP D+ Y GG F + FP++YP PP V FTTKI+HPN+ G +C+ IL ++W P T+ +++LSI S+L+ N + P E A+ ++ Sbjct: 13 DLGRDPPASCSAGPVGD-DLYHWQASIMGPSDSPYAGGVFFLSIHFPTDYPFKPPKVNFTTKIYHPNINSSGNICLDIL-------------KDQWSPALTLSKVLLSICSLLTDANPDDPLVPEIAQIYK 129
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBC31_ARATH (Probable ubiquitin carrier protein E2 31 OS=Arabidopsis thaliana GN=UBC31 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.876e-20 Identity = 48/138 (34.78%), Postives = 74/138 (53.62%), Query Frame = 1 Query: 148 FSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFKKKVSRCVRR 561 FS G + NI+EW+ I GP T YEGG FN + FP++YP PP F T I+HPN+ +G +C++IL ++W P VE+++LSI+ +L PN + P E + +++ R F ++ R Sbjct: 27 FSIGQ-NSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMNIL-------------KDKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQRAREFTAR 150
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBC14_SCHPO (Ubiquitin-conjugating enzyme E2 14 OS=Schizosaccharomyces pombe GN=ubc14 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.876e-20 Identity = 47/139 (33.81%), Postives = 78/139 (56.12%), Query Frame = 1 Query: 121 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFKK 537 DL ++P+ LVD+ N+F W+ T +GP D++Y GG F+ + FP +YP PPT++FTT+I+HPN +G VC++I L + + P + ++ I+ +L PN + P A+++R+ R F K Sbjct: 18 DLREHPIPDIRVNLVDD-NLFHWACTALGPSDSVYAGGKFHFSLKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAI------------LKQQVFKPSIKLRSVLEQILQLLREPNPDDPLVASIAEQYRNDRPSFDK 143
BLAST of CB294007 vs. ExPASy Swiss-Prot
Match: UBC4_YEAST (Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces cerevisiae GN=UBC4 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.977e-19 Identity = 47/138 (34.06%), Postives = 78/138 (56.52%), Query Frame = 1 Query: 121 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTKIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVERIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFK 534 DL ++P SAG V + +++ W +I+GP D+ Y GG F + FP++YP PP + FTTKI+HPN+ +G +C+ IL ++W P T+ +++LSI S+L+ N + P E A ++ R ++ Sbjct: 13 DLERDPPTSCSAGPVGD-DLYHWQASIMGPADSPYAGGVFFLSIHFPTDYPFKPPKISFTTKIYHPNINANGNICLDIL-------------KDQWSPALTLSKVLLSICSLLTDANPDDPLVPEIAHIYKTDRPKYE 136 The following BLAST results are available for this feature:
BLAST of CB294007 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 221
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Sequences
The
following sequences are available for this feature:
EST sequence >CB294007 ID=CB294007; Name=CB294007; organism=Citrus sinensis; type=EST; length=660bpback to top |