CB294008

Overview
NameCB294008
Unique NameCB294008
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CB294008_ssr1 microsatellite CB294008_ssr1:1..10. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1582 contig Csv1_Contig1582:41..777. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 14332_SCHMA (14-3-3 protein homolog 2 (Fragment) OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.541e-66
Identity = 122/192 (63.54%), Postives = 156/192 (81.25%), Query Frame = 2
Query:  161 ELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            ELT EERNL+SV YKNV+GARR+SWR++SSIEQK E  G+E+  +  K+YR+++E EL  IC+++L+++D+ LIP +T+ ES VFY KMKGDYYRYLAE    D+R++  + S +          +++ PTHPIRLGLALNFSVFYYEILN+P+RACHLAKQAFD+AIAELD+LNE+SYKDSTLIMQLLRDN
Sbjct:    4 ELTNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GSERKQQMAKDYREKIEKELKDICHEVLTLLDKFLIPKATTAESKVFYLKMKGDYYRYLAEVATGDERQKVIEESQRAYNDAFDIAKNQMQPTHPIRLGLALNFSVFYYEILNAPDRACHLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 193          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433S_SHEEP (14-3-3 protein sigma OS=Ovis aries GN=SFN PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 4.484e-66
Identity = 125/225 (55.56%), Postives = 159/225 (70.67%), Query Frame = 2
Query:   62 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            ER   +  A+LAEQAERY++M   MK   +   EL+ EERNL+SV YKNV+G +RA+WR+LSSIEQK   + +E+    ++EYR++VE EL  +C+ +L ++D HLI  +   ES VFY KMKGDYYRYLAE    DD+K   D +             E+PPT+PIRLGLALNFSVF+YEI NSPE A  LAK  FDEA+A+L +L+E+SYKDSTLIMQLLRDN
Sbjct:    2 ERASLIQKAKLAEQAERYEDMAAFMKSAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEESSEEKGPEVQEYREKVETELRGVCDTVLGLLDTHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDN 226          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433S_BOVIN (14-3-3 protein sigma OS=Bos taurus GN=SFN PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 4.484e-66
Identity = 125/225 (55.56%), Postives = 159/225 (70.67%), Query Frame = 2
Query:   62 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            ER   +  A+LAEQAERY++M   MK   +   EL+ EERNL+SV YKNV+G +RA+WR+LSSIEQK   + +E+    ++EYR++VE EL  +C+ +L ++D HLI  +   ES VFY KMKGDYYRYLAE    DD+K   D +             E+PPT+PIRLGLALNFSVF+YEI NSPE A  LAK  FDEA+A+L +L+E+SYKDSTLIMQLLRDN
Sbjct:    2 ERASLIQKAKLAEQAERYEDMAAFMKSAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEESSEEKGPEVQEYREKVETELRGVCDTVLGLLDTHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDN 226          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 14332_ECHMU (14-3-3 protein homolog 2 OS=Echinococcus multilocularis PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.928e-62
Identity = 121/226 (53.54%), Postives = 160/226 (70.80%), Query Frame = 2
Query:   59 KEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            K+    V +A+LAEQAERY++M  AMK +A++  EL  EERNL+SV YKNV+GARR+SWRI+SSI +K+          +   Y ++VE+EL KICND+L+++ ++LI      E+ +FYYKM GDYYRYLAE +  +   ++ + + +          +EL  THPIRLGLALNFSVFYYEI N PE+AC LAK AFD AI E+DS+ +E+YKDSTLIMQLLRDN
Sbjct:   14 KDHASLVSIAKLAEQAERYEDMAVAMKTIAEMGNELNNEERNLLSVAYKNVVGARRSSWRIMSSIAKKQ---AGTPLADQTDIYLKKVEEELTKICNDVLALLSKNLITEKIGAEAKIFYYKMMGDYYRYLAEVQEGEQNDKSTEAAEEAYQKATSLAEAELSVTHPIRLGLALNFSVFYYEIKNMPEKACSLAKAAFDAAITEVDSIKDETYKDSTLIMQLLRDN 236          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 14332_ECHGR (14-3-3 protein homolog 2 OS=Echinococcus granulosus PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.928e-62
Identity = 121/226 (53.54%), Postives = 160/226 (70.80%), Query Frame = 2
Query:   59 KEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            K+    V +A+LAEQAERY++M  AMK +A++  EL  EERNL+SV YKNV+GARR+SWRI+SSI +K+          +   Y ++VE+EL KICND+L+++ ++LI      E+ +FYYKM GDYYRYLAE +  +   ++ + + +          +EL  THPIRLGLALNFSVFYYEI N PE+AC LAK AFD AI E+DS+ +E+YKDSTLIMQLLRDN
Sbjct:   14 KDHASLVSIAKLAEQAERYEDMAVAMKTIAEMGNELNNEERNLLSVAYKNVVGARRSSWRIMSSIAKKQ---AGTPLADQTDIYLKKVEEELTKICNDVLALLSKNLITEKIGAEAKIFYYKMMGDYYRYLAEVQEGEQNDKSTEAAEEAYQKATSLAEAELSVTHPIRLGLALNFSVFYYEIKNMPEKACSLAKAAFDAAITEVDSIKDETYKDSTLIMQLLRDN 236          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 14331_SCHMA (14-3-3 protein homolog 1 OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.825e-59
Identity = 120/221 (54.30%), Postives = 157/221 (71.04%), Query Frame = 2
Query:   77 VYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRI-KEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            V++A+LAEQAERYD+M  AMK+  +    L  EERNL+SV YKNV+GARR++WR++   E K     N++  K+I +EYR ++E EL  ICN +L++++++L+P+++  +S VF+ KM+GDYYRYLAE    D R E    SL           + LP THPIRLGLALNFSVF+YEI N   +AC LAK AFD AIAELD L ++SYKDSTLIMQLLRDN
Sbjct:   18 VHIAKLAEQAERYDDMAAAMKRYTEASGNLGNEERNLLSVAYKNVVGARRSAWRVIHGSEMKAV---NDRTKKQIAEEYRIKMEKELNTICNQVLALLEDYLLPNASPDDSKVFFLKMQGDYYRYLAEVATDDARTEVVQKSLDAYTKATTAAEN-LPTTHPIRLGLALNFSVFFYEIQNDAAKACELAKSAFDSAIAELDQLQDDSYKDSTLIMQLLRDN 234          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 14331_ECHMU (14-3-3 protein homolog 1 OS=Echinococcus multilocularis PE=2 SV=3)

HSP 1 Score: 220.705 bits (561), Expect = 6.489e-57
Identity = 118/220 (53.64%), Postives = 151/220 (68.64%), Query Frame = 2
Query:   77 VYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            V  A+LAEQAERYD+M  A K +A++  EL  EERNL+SV YKNV+GARR+SWRI+SSI +K+          +   Y ++VE+EL  ICND+L+ +    I      E+ +FYYKM GDYYRYLAE +  +   ++ + + +          +EL  THPIRLGLALNFSVFYYEI N PE+AC LAK AFD AI E+DS+ +E+YKDSTLIMQLLRDN
Sbjct:   17 VQRAKLAEQAERYDDMAGACKTMAEMGNELNNEERNLLSVAYKNVLGARRSSWRIMSSIAKKQ---AGTPLADQTDIYLKKVEEELIPICNDVLA-LPVLPITEKIGAEAKIFYYKMMGDYYRYLAEVQEGEQNDKSTEAAEEANQKATSLAEAELSVTHPIRLGLALNFSVFYYEIKNMPEKACSLAKAAFDAAITEVDSIKDETYKDSTLIMQLLRDN 232          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 14331_ECHGR (14-3-3 protein homolog 1 OS=Echinococcus granulosus PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.221e-56
Identity = 117/222 (52.70%), Postives = 153/222 (68.92%), Query Frame = 2
Query:   77 VYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAK--GNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            V  A+LAEQAERYD+M  A K +AK+  EL  EE NL+SV YKNV+GARR+SWRI+SSI +K+      ++ ++     Y ++VE+EL +ICND+L+ +    I      E+ +FYYKM GDYYRY AE +  +   ++ + + +          +EL  THPIRLGLALNFSVFYYEI N PE+AC LAK AFD AI E+DS+ +E+YKDSTLIMQLLRDN
Sbjct:   17 VQRAKLAEQAERYDDMAGACKTMAKMRNELNNEEANLLSVAYKNVVGARRSSWRIMSSIAKKQAGTPLAHQHDI-----YLKKVEEELIQICNDVLA-LPVLPITEKIGAEAKIFYYKMMGDYYRYSAEVQEGEQNDKSTEAAEEANQKATSLAEAELSVTHPIRLGLALNFSVFYYEIKNMPEKACSLAKAAFDAAITEVDSIKDETYKDSTLIMQLLRDN 232          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 14338_ORYSJ (Putative 14-3-3-like protein GF14-H OS=Oryza sativa subsp. japonica GN=GF14H PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.651e-55
Identity = 120/226 (53.10%), Postives = 153/226 (67.70%), Query Frame = 2
Query:   59 KEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            KERE  V LA+LAEQAERYD+MVE MK +A++DV+++ EER L SVG+K  IGARRASWRIL S+EQK  A G++  V  I  Y+++VEDEL  +CN++LS+I  H +P + SGE+ VF+YKMKGDYYRYLAEF    ++K A D SL                        A  FS+   EI+NSPERA  +AKQA DEA AE++S   E YKDS L+MQLL++N
Sbjct:    2 KEREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMSAEERLLFSVGFKKTIGARRASWRILESLEQKVTA-GDQPGV-TINGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKMKGDYYRYLAEFSTGTEKKAATDQSLMAYQAWP----------------CAQLFSLL--EIMNSPERASQVAKQALDEATAEINSAGVEGYKDSMLMMQLLKEN 207          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433_ENCCU (14-3-3 protein homolog OS=Encephalitozoon cuniculi GN=ECU03_1010 PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 6.504e-49
Identity = 109/233 (46.78%), Postives = 150/233 (64.38%), Query Frame = 2
Query:   59 KEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVE----LTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIP---SSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            K+ E  +  A L++ AERYD+M + M+    L  E    L V  RNL SV YKN++ +RR+SWR+L S  QK E K +   V  I E  + VE+EL + C+++L +I  +++    +  + E  +F+ KMKGDYYRY AE     +  E + H+ +          + LPPT+PI+LGLALN+SVF+YEILN  E+AC +AK AFDEAI ELD+L+EE Y+DSTLIMQLLRDN
Sbjct:    4 KQYEEALQKANLSDMAERYDDMAKEMRLAVTLAHEDKHILNVMARNLFSVAYKNLVSSRRSSWRMLCSERQKLEGK-DPSVVHVINEKIKVVEEELLRFCDEVLDIITTYILSLEEAQKNIEYNIFFLKMKGDYYRYKAEVVTGPEHSEVSKHAAESYKEATEKAKT-LPPTNPIKLGLALNYSVFHYEILNDSEKACSIAKGAFDEAIKELDTLSEEHYRDSTLIMQLLRDN 234          
The following BLAST results are available for this feature:
BLAST of CB294008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
14332_SCHMA1.541e-6663.5414-3-3 protein homolog 2 (Fragment) OS=Schistosoma... [more]
1433S_SHEEP4.484e-6655.5614-3-3 protein sigma OS=Ovis aries GN=SFN PE=2 SV=... [more]
1433S_BOVIN4.484e-6655.5614-3-3 protein sigma OS=Bos taurus GN=SFN PE=2 SV=... [more]
14332_ECHMU3.928e-6253.5414-3-3 protein homolog 2 OS=Echinococcus multilocu... [more]
14332_ECHGR3.928e-6253.5414-3-3 protein homolog 2 OS=Echinococcus granulosu... [more]
14331_SCHMA1.825e-5954.3014-3-3 protein homolog 1 OS=Schistosoma mansoni PE... [more]
14331_ECHMU6.489e-5753.6414-3-3 protein homolog 1 OS=Echinococcus multilocu... [more]
14331_ECHGR3.221e-5652.7014-3-3 protein homolog 1 OS=Echinococcus granulosu... [more]
14338_ORYSJ4.651e-5553.10Putative 14-3-3-like protein GF14-H OS=Oryza sativ... [more]
1433_ENCCU6.504e-4946.7814-3-3 protein homolog OS=Encephalitozoon cuniculi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06ba07_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06ba07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB294008 ID=CB294008; Name=CB294008; organism=Citrus sinensis; type=EST; length=737bp
GAGAGAGAGAAGGAAGAGAGCTAGCGAGAGAAAGAGTGAGTGACTGAACG
AAATGGAGAAGGAGAGAGAGCATCATGTTTACTTGGCCAGACTTGCTGAG
CAAGCCGAGAGATACGACGAGATGGTTGAAGCCATGAAGAAAGTTGCCAA
GTTGGATGTGGAACTGACTGTGGAGGAGAGGAATCTGGTGTCTGTTGGGT
ACAAGAATGTGATTGGGGCAAGAAGAGCATCATGGAGGATTTTGTCTTCC
ATTGAACAGAAGGAGGAGGCCAAGGGTAATGAACAAAATGTGAAGAGGAT
TAAGGAATATAGGCAGAGGGTTGAAGATGAGCTTGCAAAGATCTGTAATG
ATATATTGTCTGTCATTGATGAACACCTAATCCCATCCTCCACATCTGGA
GAATCAACCGTGTTTTACTATAAGATGAAAGGAGATTATTACCGTTACCT
AGCTGAGTTCAAAGGTGCTGATGATCGTAAGGAAGCTGCAGATCATTCAC
TTAAGGCTTACGAGGCTGCTACAGCTGCAGCAGCCTCAGAGTTACCCCCA
ACTCATCCAATCAGACTTGGCCTGGCTCTTAACTTTTCTGTTTTCTACTA
TGAGATTTTGAACTCACCTGAGAGGGCTTGCCACCTGGCTAAACAAGCAT
TTGATGAGGCGATTGCTGAACTTGATAGCCTTAATGAAGAGTCCTACAAG
GACAGCACCCTTATTATGCAGCTTCTTCGGGATAATC
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