CB294008

Overview
NameCB294008
Unique NameCB294008
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CB294008_ssr1 microsatellite CB294008_ssr1:1..10. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1582 contig Csv1_Contig1582:41..777. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433B_SOYBN (14-3-3-like protein B (Fragment) OS=Glycine max GN=GF14B PE=2 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 5.646e-77
Identity = 144/227 (63.44%), Postives = 180/227 (79.30%), Query Frame = 2
Query:   65 REHHVYLARLAEQAERYDEMVEAMKKVAKLDV---ELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            RE +VYLA ++EQAERY+EMVE M+KV        ELTVEERNL+SV YKNVIG+ RA+WRI+SSIEQKEE + N+ +V  +K YR +VE+EL ++C  ILS++D +L+PS+++ ES VFY KMKGDY+RYLAEFK  D+RK A + ++           ++LPPTHPIRLGLALNFSVFYYEILN  ++AC +AKQAF+EAIAELD+L EESYKDSTLIMQLLRDN
Sbjct:    6 REQYVYLANVSEQAERYEEMVEFMQKVVVGSTPASELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNDDHVSLVKHYRSKVENELTQVCATILSLLDSNLVPSASASESKVFYLKMKGDYHRYLAEFKVGDERKTATEDTMLSYKAAQDIASADLPPTHPIRLGLALNFSVFYYEILNQSDKACAMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDN 232          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433_FUCVE (14-3-3-like protein OS=Fucus vesiculosus PE=2 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 4.046e-75
Identity = 145/225 (64.44%), Postives = 176/225 (78.22%), Query Frame = 2
Query:   65 REHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTL-IMQLLRDN 736
            R+  VY+A+LAEQAER+DEMV+ MK VA+   EL+VEERNL+SV YKNVIG+RRASWR++SSIE K+        +  I++Y+ ++E EL  IC DIL +I+  LIP+STS E  VFYYKMKGDY+RYLAEF+ AD+RK +A  +L            +LPPTHPIRLGLALNFSVFYYEILNSP+RAC LAK AFD+AIAELD+L+EESYKDSTL IMQLLRDN
Sbjct:    4 RDDLVYMAKLAEQAERFDEMVDHMKAVAQQPKELSVEERNLLSVAYKNVIGSRRASWRVISSIEGKDTVS---DQLPLIRDYKSKIETELTDICADILKIIEAELIPNSTSEEGKVFYYKMKGDYHRYLAEFQSADERKTSASDALDAYQLASDHANQDLPPTHPIRLGLALNFSVFYYEILNSPDRACGLAKAAFDDAIAELDTLSEESYKDSTLIIMQLLRDN 225          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433Z_BOMMO (14-3-3 protein zeta OS=Bombyx mori GN=14-3-3zeta PE=2 SV=2)

HSP 1 Score: 281.182 bits (718), Expect = 4.046e-75
Identity = 142/228 (62.28%), Postives = 176/228 (77.19%), Query Frame = 2
Query:   53 MEKEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            M  ++E  V  A+LAEQAERYD+M  AMK+V +  VEL+ EERNL+SV YKNV+GARR+SWR++SSIEQK E  G+E+  +  KEYR +VE EL +IC D+L ++D+HLIP +++ ES VFY KMKGDYYRYLAE    + R    + S K          +++ PTHPIRLGLALNFSVFYYEILNSP++AC LAKQAFD+AIAELD+LNE+SYKDSTLIMQLLRDN
Sbjct:    1 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 226          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 14332_ENTHI (14-3-3 protein 2 OS=Entamoeba histolytica PE=3 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 5.284e-75
Identity = 142/224 (63.39%), Postives = 178/224 (79.46%), Query Frame = 2
Query:   65 REHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            RE  VYL++LAEQ+ERY+EMV+ MK+VA++  EL+VEERNL+SV YKNV+G+RRASWRI+SS+EQKE+AKGN Q V+ IK YR ++E EL++ C+D+L +I E L+ +STS ES VF+ KM+GDYYRY AEF   + RKE AD SL           S L PTHPIRLGLALNFSVFYY+I+N  ++AC LAK+AFDEAI +LD + EESYK+STLIMQLLRDN
Sbjct:    4 REDLVYLSKLAEQSERYEEMVQYMKQVAEMGTELSVEERNLISVAYKNVVGSRRASWRIISSLEQKEQAKGNTQRVELIKTYRAKIEQELSQKCDDVLKIITEFLLKNSTSIESKVFFKKMEGDYYRYYAEFTVDEKRKEVADKSLAAYQEATDTAAS-LVPTHPIRLGLALNFSVFYYQIMNDADKACQLAKEAFDEAIQKLDEVPEESYKESTLIMQLLRDN 226          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 14332_CAEEL (14-3-3-like protein 2 OS=Caenorhabditis elegans GN=ftt-2 PE=1 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.537e-74
Identity = 140/228 (61.40%), Postives = 174/228 (76.32%), Query Frame = 2
Query:   53 MEKEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            M   +E  V  A+LAEQAERYD+M  +MKKV +L  EL+ EERNL+SV YKNV+GARR+SWR++SSIEQK E  G+E+  +  KEYR++VE EL  IC D+L+++D+ LIP + + ES VFY KMKGDYYRYLAE    DDR    + S +           ++ PTHPIRLGLALNFSVF+YEILN+P++AC LAKQAFD+AIAELD+LNE+SYKDSTLIMQLLRDN
Sbjct:    1 MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GSEKKQQMAKEYREKVEKELRDICQDVLNLLDKFLIPKAGAAESKVFYLKMKGDYYRYLAEVASGDDRNSVVEKSQQSYQEAFDIAKDKMQPTHPIRLGLALNFSVFFYEILNAPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 226          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433_NEOCA (14-3-3 protein homolog OS=Neospora caninum PE=2 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 2.622e-74
Identity = 140/236 (59.32%), Postives = 180/236 (76.27%), Query Frame = 2
Query:   50 EMEKEREHHVYLARLAEQAERYDEMVEAMKKVAK--LDV-----ELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            E++  R+ +VY A+LAEQAERYDEM EAMK + +  LD      EL+VEERNL+SV YKN +GARRASWRI+SS+EQKE +K + QN     EYRQ+VE+EL KIC+DIL ++ + LIP ++  ES VFYYKMKGDYYRY++EF G + +K+AAD + +             P THPIRLGLALN+SVF+YEILN P++AC +AK+AFD+AI E D+++E+SYKDSTLIMQLLRDN
Sbjct:    4 EIKNLRDEYVYKAKLAEQAERYDEMAEAMKNLVENCLDEQQPKDELSVEERNLLSVAYKNAVGARRASWRIISSVEQKELSKQHMQNKALAAEYRQKVEEELNKICHDILQLLTDKLIPKTSDSESKVFYYKMKGDYYRYISEFSGEEGKKQAADQAQESYQKATETAEGHSPATHPIRLGLALNYSVFFYEILNLPQQACEMAKRAFDDAITEFDNVSEDSYKDSTLIMQLLRDN 239          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433Z_DROME (14-3-3 protein zeta OS=Drosophila melanogaster GN=14-3-3zeta PE=1 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 2.622e-74
Identity = 140/225 (62.22%), Postives = 173/225 (76.89%), Query Frame = 2
Query:   62 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            ++E  V  A+LAEQ+ERYD+M +AMK V +  VEL+ EERNL+SV YKNV+GARR+SWR++SSIEQK EA   +Q + R  EYR+RVE EL +IC ++L ++D++LIP +++ ES VFY KMKGDYYRYLAE    D R    D S             ++ PTHPIRLGLALNFSVFYYEILNSP++AC LAKQAFD+AIAELD+LNE+SYKDSTLIMQLLRDN
Sbjct:    5 DKEELVQKAKLAEQSERYDDMAQAMKSVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEASARKQQLAR--EYRERVEKELREICYEVLGLLDKYLIPKASNPESKVFYLKMKGDYYRYLAEVATGDARNTVVDDSQTAYQDAFDISKGKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 227          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433B_XENTR (14-3-3 protein beta/alpha OS=Xenopus tropicalis GN=ywhab PE=2 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 2.622e-74
Identity = 139/225 (61.78%), Postives = 173/225 (76.89%), Query Frame = 2
Query:   62 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            ++   V  A+L+EQAERYD+M  +MK V +L  EL+ EERNL+SV YKNV+GARR+SWR++SSIEQK E  GN++  +  +EYR++VE EL  IC D+L ++D++L+P++T  ES VFY KMKGDYYRYL+E    D ++E    S +          SE+ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK AFDEAIAELD+LNEESYKDSTLIMQLLRDN
Sbjct:    2 DKSELVQKAKLSEQAERYDDMAASMKAVTELGAELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GNDKRQQMAREYREKVETELQDICKDVLGLLDKYLVPNATPPESKVFYLKMKGDYYRYLSEVASGDSKQETVTCSQQAYQEAFEISKSEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKSAFDEAIAELDTLNEESYKDSTLIMQLLRDN 224          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433Z_PONAB (14-3-3 protein zeta/delta OS=Pongo abelii GN=YWHAZ PE=2 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 4.473e-74
Identity = 140/225 (62.22%), Postives = 171/225 (76.00%), Query Frame = 2
Query:   62 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            ++   V  A+LAEQAERYD+M   MK V +   EL+ EERNL+SV YKNV+GARR+SWR++SSIEQK E  G E+  +  +EYR+++E EL  ICND+LS++++ LIP+++  ES VFY KMKGDYYRYLAE    DD+K   D S +           E+ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK AFDEAIAELD+L+EESYKDSTLIMQLLRDN
Sbjct:    2 DKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQKTE--GAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDN 224          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433Z_HUMAN (14-3-3 protein zeta/delta OS=Homo sapiens GN=YWHAZ PE=1 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 4.473e-74
Identity = 140/225 (62.22%), Postives = 171/225 (76.00%), Query Frame = 2
Query:   62 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            ++   V  A+LAEQAERYD+M   MK V +   EL+ EERNL+SV YKNV+GARR+SWR++SSIEQK E  G E+  +  +EYR+++E EL  ICND+LS++++ LIP+++  ES VFY KMKGDYYRYLAE    DD+K   D S +           E+ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK AFDEAIAELD+L+EESYKDSTLIMQLLRDN
Sbjct:    2 DKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQKTE--GAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDN 224          
The following BLAST results are available for this feature:
BLAST of CB294008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433B_SOYBN5.646e-7763.4414-3-3-like protein B (Fragment) OS=Glycine max GN... [more]
1433_FUCVE4.046e-7564.4414-3-3-like protein OS=Fucus vesiculosus PE=2 SV=1[more]
1433Z_BOMMO4.046e-7562.2814-3-3 protein zeta OS=Bombyx mori GN=14-3-3zeta P... [more]
14332_ENTHI5.284e-7563.3914-3-3 protein 2 OS=Entamoeba histolytica PE=3 SV=... [more]
14332_CAEEL1.537e-7461.4014-3-3-like protein 2 OS=Caenorhabditis elegans GN... [more]
1433_NEOCA2.622e-7459.3214-3-3 protein homolog OS=Neospora caninum PE=2 SV... [more]
1433Z_DROME2.622e-7462.2214-3-3 protein zeta OS=Drosophila melanogaster GN=... [more]
1433B_XENTR2.622e-7461.7814-3-3 protein beta/alpha OS=Xenopus tropicalis GN... [more]
1433Z_PONAB4.473e-7462.2214-3-3 protein zeta/delta OS=Pongo abelii GN=YWHAZ... [more]
1433Z_HUMAN4.473e-7462.2214-3-3 protein zeta/delta OS=Homo sapiens GN=YWHAZ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06ba07_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06ba07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB294008 ID=CB294008; Name=CB294008; organism=Citrus sinensis; type=EST; length=737bp
GAGAGAGAGAAGGAAGAGAGCTAGCGAGAGAAAGAGTGAGTGACTGAACG
AAATGGAGAAGGAGAGAGAGCATCATGTTTACTTGGCCAGACTTGCTGAG
CAAGCCGAGAGATACGACGAGATGGTTGAAGCCATGAAGAAAGTTGCCAA
GTTGGATGTGGAACTGACTGTGGAGGAGAGGAATCTGGTGTCTGTTGGGT
ACAAGAATGTGATTGGGGCAAGAAGAGCATCATGGAGGATTTTGTCTTCC
ATTGAACAGAAGGAGGAGGCCAAGGGTAATGAACAAAATGTGAAGAGGAT
TAAGGAATATAGGCAGAGGGTTGAAGATGAGCTTGCAAAGATCTGTAATG
ATATATTGTCTGTCATTGATGAACACCTAATCCCATCCTCCACATCTGGA
GAATCAACCGTGTTTTACTATAAGATGAAAGGAGATTATTACCGTTACCT
AGCTGAGTTCAAAGGTGCTGATGATCGTAAGGAAGCTGCAGATCATTCAC
TTAAGGCTTACGAGGCTGCTACAGCTGCAGCAGCCTCAGAGTTACCCCCA
ACTCATCCAATCAGACTTGGCCTGGCTCTTAACTTTTCTGTTTTCTACTA
TGAGATTTTGAACTCACCTGAGAGGGCTTGCCACCTGGCTAAACAAGCAT
TTGATGAGGCGATTGCTGAACTTGATAGCCTTAATGAAGAGTCCTACAAG
GACAGCACCCTTATTATGCAGCTTCTTCGGGATAATC
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