CB294011

Overview
NameCB294011
Unique NameCB294011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CB294011_ssr40 microsatellite CB294011_ssr40:40..51. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1814 contig Csv1_Contig1814:32..750. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_STRPM (Adenylate kinase OS=Streptococcus pyogenes serotype M28 GN=adk PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.903e-22
Identity = 67/209 (32.06%), Postives = 104/209 (49.76%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES--GNDKFLIDGFPRNEENRAAFEAV-------------TKIEPEFVLFFDCSEEEMERRILNRNQG--------------------REDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVF-DAVKAV 710
            +G PG+GKGTQ A IVE FG  H+S GD+ RA + + +E G + ++ I +G++VP EVT  ++++ + E       FL+DG+PR  E   A +A               K++P       C  E +  RI+NR  G                    REDD  ET+ +RL V +    P++++Y   G V  I+  + + +VF D  KA+
Sbjct:    6 IGLPGAGKGTQAAKIVEEFGVAHISTGDMFRAAMANQTEMGRLAKSYIDKGELVPDEVTNGIVKERLAEDDIAEKGFLLDGYPRTIEQAHALDATLEELGLRLDGVINIKVDP------SCLVERLSGRIINRKTGETFHKVFNPPVDYKEEDYYQREDDKPETVKRRLDVNMAQGEPILEHYRKLGLVTDIEGNQEITDVFADVEKAL 208          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_STRPF (Adenylate kinase OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=adk PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.903e-22
Identity = 67/209 (32.06%), Postives = 104/209 (49.76%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES--GNDKFLIDGFPRNEENRAAFEAV-------------TKIEPEFVLFFDCSEEEMERRILNRNQG--------------------REDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVF-DAVKAV 710
            +G PG+GKGTQ A IVE FG  H+S GD+ RA + + +E G + ++ I +G++VP EVT  ++++ + E       FL+DG+PR  E   A +A               K++P       C  E +  RI+NR  G                    REDD  ET+ +RL V +    P++++Y   G V  I+  + + +VF D  KA+
Sbjct:    6 MGLPGAGKGTQAAKIVEEFGVAHISTGDMFRAAMANQTEMGRLAKSYIDKGELVPDEVTNGIVKERLAEDDIAEKGFLLDGYPRTIEQAHALDATLEELGLRLDGVINIKVDP------SCLVERLSGRIINRKTGETFHKVFNPPVDYKEEDYYQREDDKPETVKRRLDVNMAQGEPILEHYRKLGLVTDIEGNQEITDVFADVEKAL 208          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_STRPD (Adenylate kinase OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=adk PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.903e-22
Identity = 67/209 (32.06%), Postives = 104/209 (49.76%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES--GNDKFLIDGFPRNEENRAAFEAV-------------TKIEPEFVLFFDCSEEEMERRILNRNQG--------------------REDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVF-DAVKAV 710
            +G PG+GKGTQ A IVE FG  H+S GD+ RA + + +E G + ++ I +G++VP EVT  ++++ + E       FL+DG+PR  E   A +A               K++P       C  E +  RI+NR  G                    REDD  ET+ +RL V +    P++++Y   G V  I+  + + +VF D  KA+
Sbjct:    6 IGLPGAGKGTQAAKIVEEFGVAHISTGDMFRAAMANQTEMGRLAKSYIDKGELVPDEVTNGIVKERLAEDDIAEKGFLLDGYPRTIEQAHALDATLEELGLRLDGVINIKVDP------SCLVERLSGRIINRKTGETFHKVFNPPVDYKEEDYYQREDDKPETVKRRLDVNMAQGEPILEHYRKLGLVTDIEGNQEITDVFADVEKAL 208          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_STRPC (Adenylate kinase OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=adk PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.903e-22
Identity = 67/209 (32.06%), Postives = 104/209 (49.76%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES--GNDKFLIDGFPRNEENRAAFEAV-------------TKIEPEFVLFFDCSEEEMERRILNRNQG--------------------REDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVF-DAVKAV 710
            +G PG+GKGTQ A IVE FG  H+S GD+ RA + + +E G + ++ I +G++VP EVT  ++++ + E       FL+DG+PR  E   A +A               K++P       C  E +  RI+NR  G                    REDD  ET+ +RL V +    P++++Y   G V  I+  + + +VF D  KA+
Sbjct:    6 IGLPGAGKGTQAAKIVEEFGVAHISTGDMFRAAMANQTEMGRLAKSYIDKGELVPDEVTNGIVKERLAEDDIAEKGFLLDGYPRTIEQAHALDATLEELGLRLDGVINIKVDP------SCLVERLSGRIINRKTGETFHKVFNPPVDYKEEDYYQREDDKPETVKRRLDVNMAQGEPILEHYRKLGLVTDIEGNQEITDVFADVEKAL 208          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_STRPB (Adenylate kinase OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=adk PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.903e-22
Identity = 67/209 (32.06%), Postives = 104/209 (49.76%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES--GNDKFLIDGFPRNEENRAAFEAV-------------TKIEPEFVLFFDCSEEEMERRILNRNQG--------------------REDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVF-DAVKAV 710
            +G PG+GKGTQ A IVE FG  H+S GD+ RA + + +E G + ++ I +G++VP EVT  ++++ + E       FL+DG+PR  E   A +A               K++P       C  E +  RI+NR  G                    REDD  ET+ +RL V +    P++++Y   G V  I+  + + +VF D  KA+
Sbjct:    6 IGLPGAGKGTQAAKIVEEFGVAHISTGDMFRAAMANQTEMGRLAKSYIDKGELVPDEVTNGIVKERLAEDDIAEKGFLLDGYPRTIEQAHALDATLEELGLRLDGVINIKVDP------SCLVERLSGRIINRKTGETFHKVFNPPVDYKEEDYYQREDDKPETVKRRLDVNMAQGEPILEHYRKLGLVTDIEGNQEITDVFADVEKAL 208          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_STRP8 (Adenylate kinase OS=Streptococcus pyogenes serotype M18 GN=adk PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.903e-22
Identity = 67/209 (32.06%), Postives = 104/209 (49.76%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES--GNDKFLIDGFPRNEENRAAFEAV-------------TKIEPEFVLFFDCSEEEMERRILNRNQG--------------------REDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVF-DAVKAV 710
            +G PG+GKGTQ A IVE FG  H+S GD+ RA + + +E G + ++ I +G++VP EVT  ++++ + E       FL+DG+PR  E   A +A               K++P       C  E +  RI+NR  G                    REDD  ET+ +RL V +    P++++Y   G V  I+  + + +VF D  KA+
Sbjct:    6 IGLPGAGKGTQAAKIVEEFGVAHISTGDMFRAAMANQTEMGRLAKSYIDKGELVPDEVTNGIVKERLAEDDIAEKGFLLDGYPRTIEQAHALDATLEELGLRLDGVINIKVDP------SCLVERLSGRIINRKTGETFHKVFNPPVDYKEEDYYQREDDKPETVKRRLDVNMAQGEPILEHYRKLGLVTDIEGNQEITDVFADVEKAL 208          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_STRP3 (Adenylate kinase OS=Streptococcus pyogenes serotype M3 GN=adk PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.903e-22
Identity = 67/209 (32.06%), Postives = 104/209 (49.76%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES--GNDKFLIDGFPRNEENRAAFEAV-------------TKIEPEFVLFFDCSEEEMERRILNRNQG--------------------REDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVF-DAVKAV 710
            +G PG+GKGTQ A IVE FG  H+S GD+ RA + + +E G + ++ I +G++VP EVT  ++++ + E       FL+DG+PR  E   A +A               K++P       C  E +  RI+NR  G                    REDD  ET+ +RL V +    P++++Y   G V  I+  + + +VF D  KA+
Sbjct:    6 MGLPGAGKGTQAAKIVEEFGVAHISTGDMFRAAMANQTEMGRLAKSYIDKGELVPDEVTNGIVKERLAEDDIAEKGFLLDGYPRTIEQAHALDATLEELGLRLDGVINIKVDP------SCLVERLSGRIINRKTGETFHKVFNPPVDYKEEDYYQREDDKPETVKRRLDVNMAQGEPILEHYRKLGLVTDIEGNQEITDVFADVEKAL 208          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_STRP1 (Adenylate kinase OS=Streptococcus pyogenes serotype M1 GN=adk PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.903e-22
Identity = 67/209 (32.06%), Postives = 104/209 (49.76%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES--GNDKFLIDGFPRNEENRAAFEAV-------------TKIEPEFVLFFDCSEEEMERRILNRNQG--------------------REDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVF-DAVKAV 710
            +G PG+GKGTQ A IVE FG  H+S GD+ RA + + +E G + ++ I +G++VP EVT  ++++ + E       FL+DG+PR  E   A +A               K++P       C  E +  RI+NR  G                    REDD  ET+ +RL V +    P++++Y   G V  I+  + + +VF D  KA+
Sbjct:    6 MGLPGAGKGTQAAKIVEEFGIAHISTGDMFRAAMANQTEMGRLAKSYIDKGELVPDEVTNGIVKERLAEDDIAEKGFLLDGYPRTIEQAHALDATLEELGLRLDGVINIKVDP------SCLVERLSGRIINRKTGETFHKVFNPPVDYKEEDYYQREDDKPETVKRRLDVNMAQGEPILEHYRKLGLVTDIEGNQEITDVFADVEKAL 208          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_SHIDS (Adenylate kinase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=adk PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.903e-22
Identity = 69/201 (34.33%), Postives = 101/201 (50.25%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQ-KAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIMKRLKVFLQSSLPVVQYYEAKG-----KVQKIDAAKPVAEV 689
            LG PG+GKGTQ   I+E +G   +S GD+LRA +KSGSE G   ++++  GK+V  E+ I L++ +  +E   + FL+DGFPR      A +    I  ++VL FD  +E +  RI+ R                                R+DD  ET+ KRL  + Q + P++ YY  +      K  K+D  KPVAEV
Sbjct:    6 LGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKGRIAQEDCRNGFLLDGFPRTIPQADAMKE-AGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEV 205          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_PROMA (Adenylate kinase OS=Prochlorococcus marinus GN=adk PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.903e-22
Identity = 59/174 (33.91%), Postives = 103/174 (59.20%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFE-AVTKIEP--EFVLFFDCSEEEMERRILNRNQGREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVFDAVK 704
            LG PG+GKGTQ + I +  G+ HLS GDLLR E+  G++ G   + ++ +G++V  E+ I +++K + +  ++ +L+DGFPRN    +  +  + +I    E VL  +  +E +  R+L R  GR+DDN   I  RLK++   + P+V +Y+ +G ++ I+    V +V   +K
Sbjct:    8 LGPPGAGKGTQASLICKDQGFLHLSTGDLLREEVSGGTDLGKKAELIMNKGELVSDEIVISIVEKRLIKY-SEGWLLDGFPRNLAQASLLQNLLGRISQPIEIVLLIEIDDEILTERMLGR--GRKDDNKAVIKNRLKIYKDQTSPLVDHYKKQGILKSINGCGSVEDVNSRIK 178          
The following BLAST results are available for this feature:
BLAST of CB294011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_STRPM2.903e-2232.06Adenylate kinase OS=Streptococcus pyogenes serotyp... [more]
KAD_STRPF2.903e-2232.06Adenylate kinase OS=Streptococcus pyogenes serotyp... [more]
KAD_STRPD2.903e-2232.06Adenylate kinase OS=Streptococcus pyogenes serotyp... [more]
KAD_STRPC2.903e-2232.06Adenylate kinase OS=Streptococcus pyogenes serotyp... [more]
KAD_STRPB2.903e-2232.06Adenylate kinase OS=Streptococcus pyogenes serotyp... [more]
KAD_STRP82.903e-2232.06Adenylate kinase OS=Streptococcus pyogenes serotyp... [more]
KAD_STRP32.903e-2232.06Adenylate kinase OS=Streptococcus pyogenes serotyp... [more]
KAD_STRP12.903e-2232.06Adenylate kinase OS=Streptococcus pyogenes serotyp... [more]
KAD_SHIDS2.903e-2234.33Adenylate kinase OS=Shigella dysenteriae serotype ... [more]
KAD_PROMA2.903e-2233.91Adenylate kinase OS=Prochlorococcus marinus GN=adk... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06bf01_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06bf01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB294011 ID=CB294011; Name=CB294011; organism=Citrus sinensis; type=EST; length=719bp
TTGGCATCCCTCTGCCTTCTTTCTTTCCCTCCATATTCTTCTCTCTCTCT
CCAAACAAAACAACGCTCGCAATTCGCTAAGATCGGTTATTCAGACTGAG
TTAGTTGGCGCTGATGGGAACTGTGGTTGAAACTCCTGTCAAGGAAGCAG
ATGCTACCGTAACTGTGAAGAAGCCCACTGTTGTTTTTGTTTTGGGTGGA
CCAGGCAGTGGAAAAGGAACCCAGTGCGCAAACATTGTTGAACACTTTGG
ATACACCCATCTCAGTGCTGGTGATCTTCTCAGAGCCGAAATCAAATCTG
GCTCTGAAAATGGAACCATGATTCAGAACATGATTAAAGAGGGAAAAATC
GTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAAGCAATGGAGGAAAG
TGGAAATGATAAATTTCTCATCGATGGTTTTCCCAGAAACGAGGAAAATC
GTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAGAATTCGTTCTGTTT
TTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATTTTGAATAGGAATCA
GGGAAGAGAAGATGATAACGTTGAGACAATTATGAAGCGGCTTAAGGTTT
TCTTACAATCTAGTCTCCCTGTGGTTCAATATTATGAAGCTAAGGGTAAA
GTTCAGAAGATTGATGCTGCAAAGCCTGTTGCAGAGGTTTTTGATGCTGT
TAAAGCTGTTTTTACCCCA
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