CB294011

Overview
NameCB294011
Unique NameCB294011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_STAES (Adenylate kinase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=adk PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.468e-22
Identity = 63/203 (31.03%), Postives = 107/203 (52.71%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRN-EENRAAFEAVTKIEPEF--VLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVFDAV 701
            +G PG+GKGTQ + IV+ F   H+S GD+ R  IK  ++ G   ++ +  G++VP EVT+ ++++ + E    K FL+DGFPR  ++  +  + +++++ E   V+  +  EEE+  R+  R                                REDDN ET+  RL V ++ S P+++YY  KG ++ ID +K + EV + V
Sbjct:    6 MGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKDETDLGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIDQAESLSQIMSELDREIDAVINIEVPEEELMNRLTGRRICEKCGTTYHLVFNPPKVDGICDIDGGKLYQREDDNPETVSNRLSVNVKQSKPILEYYNNKGVLKNIDGSKDIDEVTNDV 208          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_STAEQ (Adenylate kinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=adk PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.468e-22
Identity = 63/203 (31.03%), Postives = 107/203 (52.71%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRN-EENRAAFEAVTKIEPEF--VLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVFDAV 701
            +G PG+GKGTQ + IV+ F   H+S GD+ R  IK  ++ G   ++ +  G++VP EVT+ ++++ + E    K FL+DGFPR  ++  +  + +++++ E   V+  +  EEE+  R+  R                                REDDN ET+  RL V ++ S P+++YY  KG ++ ID +K + EV + V
Sbjct:    6 MGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKDETDLGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIDQAESLSQIMSELDREIDAVINIEVPEEELMNRLTGRRICEKCGTTYHLVFNPPKVDGICDIDGGKLYQREDDNPETVSNRLSVNVKQSKPILEYYNNKGVLKNIDGSKDIDEVTNDV 208          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_STAAW (Adenylate kinase OS=Staphylococcus aureus (strain MW2) GN=adk PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.468e-22
Identity = 65/202 (32.18%), Postives = 102/202 (50.50%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEF------VLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEV 689
            +G PG+GKGTQ + IV+ F   H+S GD+ R  IK  +E G   ++ +  G++VP EVT+ ++++ + E    K FL+DGFPR  E     EA+  I  E       V+  +  EEE+  R+  R                                REDDN ET+  RL V ++ S P++ +Y+ KG ++ ID +K +++V
Sbjct:    6 MGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKEETELGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQA---EALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQREDDNPETVANRLSVNIKQSKPILDFYDQKGVLKNIDGSKDISDV 204          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_STAAS (Adenylate kinase OS=Staphylococcus aureus (strain MSSA476) GN=adk PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.468e-22
Identity = 65/202 (32.18%), Postives = 102/202 (50.50%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEF------VLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEV 689
            +G PG+GKGTQ + IV+ F   H+S GD+ R  IK  +E G   ++ +  G++VP EVT+ ++++ + E    K FL+DGFPR  E     EA+  I  E       V+  +  EEE+  R+  R                                REDDN ET+  RL V ++ S P++ +Y+ KG ++ ID +K +++V
Sbjct:    6 MGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKEETELGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQA---EALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQREDDNPETVANRLSVNIKQSKPILDFYDQKGVLKNIDGSKDISDV 204          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_STAAR (Adenylate kinase OS=Staphylococcus aureus (strain MRSA252) GN=adk PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.468e-22
Identity = 65/202 (32.18%), Postives = 102/202 (50.50%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEF------VLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEV 689
            +G PG+GKGTQ + IV+ F   H+S GD+ R  IK  +E G   ++ +  G++VP EVT+ ++++ + E    K FL+DGFPR  E     EA+  I  E       V+  +  EEE+  R+  R                                REDDN ET+  RL V ++ S P++ +Y+ KG ++ ID +K +++V
Sbjct:    6 MGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKEETELGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQA---EALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQREDDNPETVANRLSVNIKQSKPILDFYDQKGVLKNIDGSKDISDV 204          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_STAAN (Adenylate kinase OS=Staphylococcus aureus (strain N315) GN=adk PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.468e-22
Identity = 65/202 (32.18%), Postives = 102/202 (50.50%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEF------VLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEV 689
            +G PG+GKGTQ + IV+ F   H+S GD+ R  IK  +E G   ++ +  G++VP EVT+ ++++ + E    K FL+DGFPR  E     EA+  I  E       V+  +  EEE+  R+  R                                REDDN ET+  RL V ++ S P++ +Y+ KG ++ ID +K +++V
Sbjct:    6 MGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKEETELGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQA---EALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQREDDNPETVANRLSVNIKQSKPILDFYDQKGVLKNIDGSKDISDV 204          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_STAAM (Adenylate kinase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=adk PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.468e-22
Identity = 65/202 (32.18%), Postives = 102/202 (50.50%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEF------VLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEV 689
            +G PG+GKGTQ + IV+ F   H+S GD+ R  IK  +E G   ++ +  G++VP EVT+ ++++ + E    K FL+DGFPR  E     EA+  I  E       V+  +  EEE+  R+  R                                REDDN ET+  RL V ++ S P++ +Y+ KG ++ ID +K +++V
Sbjct:    6 MGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKEETELGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQA---EALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQREDDNPETVANRLSVNIKQSKPILDFYDQKGVLKNIDGSKDISDV 204          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_STAAC (Adenylate kinase OS=Staphylococcus aureus (strain COL) GN=adk PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.468e-22
Identity = 65/202 (32.18%), Postives = 102/202 (50.50%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEF------VLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEV 689
            +G PG+GKGTQ + IV+ F   H+S GD+ R  IK  +E G   ++ +  G++VP EVT+ ++++ + E    K FL+DGFPR  E     EA+  I  E       V+  +  EEE+  R+  R                                REDDN ET+  RL V ++ S P++ +Y+ KG ++ ID +K +++V
Sbjct:    6 MGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKEETELGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQA---EALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQREDDNPETVANRLSVNIKQSKPILDFYDQKGVLKNIDGSKDISDV 204          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_LEUMM (Adenylate kinase OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=adk PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.468e-22
Identity = 59/177 (33.33%), Postives = 95/177 (53.67%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFV---LFFDCSEEEMERRILNRNQGREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVFDAVKAV 710
            LG PG+GKGTQ   IV+ +   H+S GD+ RA +   +E G   +  +  G +VP E+T  ++   + +   +  F++DG+PRNE      +       + V   L+F+ ++  +  R+L R  GR DD  E I  RL V   ++LP+V YY+  G +  ID  + +A+V+  VK V
Sbjct:    8 LGLPGAGKGTQADFIVKDYSIVHISTGDIFRANLAENTELGQKARQFMDAGDLVPDEITNAMVADRLNQQDVETGFMLDGYPRNEAQAVFLDKYLSDNGKSVSATLYFEVADTLLRERLLGR--GRADDTPEVIDNRLAVNKAANLPLVDYYQKAGVLHTIDGGRELADVYHDVKEV 182          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_CORK4 (Adenylate kinase OS=Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=adk PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.468e-22
Identity = 64/171 (37.43%), Postives = 98/171 (57.31%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQ-KAMEESGNDKFLIDGFPRNEENRAAFEAV-----TKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIMKRLKVFLQSSLPVVQYYE-------AKGKVQKID 665
            LG PG+GKGTQ A + +  G  H+S GDL R  I + +E G   ++ I  GK+VP+ VT+ +++ +  ++   D FL+DGFPR  E     + +     TK++   VL FD SE+ +  R+L R  GR DD  E I  RLKV+   + P+++YY+       A+G V+ I+
Sbjct:    6 LGPPGAGKGTQAAILSDKLGVPHVSTGDLFRENIGNNTELGQEAKSYIDAGKLVPTSVTVNMVKDRLSQDDAADGFLLDGFPRTVEQGDELKNILDGLGTKLDA--VLQFDVSEDVVVERMLAR--GRADDTEEVIRTRLKVYRDETAPLLEYYKDSIIRIVAEGSVEDIN 172          
The following BLAST results are available for this feature:
BLAST of CB294011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_STAES6.468e-2231.03Adenylate kinase OS=Staphylococcus epidermidis (st... [more]
KAD_STAEQ6.468e-2231.03Adenylate kinase OS=Staphylococcus epidermidis (st... [more]
KAD_STAAW6.468e-2232.18Adenylate kinase OS=Staphylococcus aureus (strain ... [more]
KAD_STAAS6.468e-2232.18Adenylate kinase OS=Staphylococcus aureus (strain ... [more]
KAD_STAAR6.468e-2232.18Adenylate kinase OS=Staphylococcus aureus (strain ... [more]
KAD_STAAN6.468e-2232.18Adenylate kinase OS=Staphylococcus aureus (strain ... [more]
KAD_STAAM6.468e-2232.18Adenylate kinase OS=Staphylococcus aureus (strain ... [more]
KAD_STAAC6.468e-2232.18Adenylate kinase OS=Staphylococcus aureus (strain ... [more]
KAD_LEUMM6.468e-2233.33Adenylate kinase OS=Leuconostoc mesenteroides subs... [more]
KAD_CORK46.468e-2237.43Adenylate kinase OS=Corynebacterium kroppenstedtii... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06bf01_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06bf01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB294011 ID=CB294011; Name=CB294011; organism=Citrus sinensis; type=EST; length=719bp
TTGGCATCCCTCTGCCTTCTTTCTTTCCCTCCATATTCTTCTCTCTCTCT
CCAAACAAAACAACGCTCGCAATTCGCTAAGATCGGTTATTCAGACTGAG
TTAGTTGGCGCTGATGGGAACTGTGGTTGAAACTCCTGTCAAGGAAGCAG
ATGCTACCGTAACTGTGAAGAAGCCCACTGTTGTTTTTGTTTTGGGTGGA
CCAGGCAGTGGAAAAGGAACCCAGTGCGCAAACATTGTTGAACACTTTGG
ATACACCCATCTCAGTGCTGGTGATCTTCTCAGAGCCGAAATCAAATCTG
GCTCTGAAAATGGAACCATGATTCAGAACATGATTAAAGAGGGAAAAATC
GTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAAGCAATGGAGGAAAG
TGGAAATGATAAATTTCTCATCGATGGTTTTCCCAGAAACGAGGAAAATC
GTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAGAATTCGTTCTGTTT
TTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATTTTGAATAGGAATCA
GGGAAGAGAAGATGATAACGTTGAGACAATTATGAAGCGGCTTAAGGTTT
TCTTACAATCTAGTCTCCCTGTGGTTCAATATTATGAAGCTAAGGGTAAA
GTTCAGAAGATTGATGCTGCAAAGCCTGTTGCAGAGGTTTTTGATGCTGT
TAAAGCTGTTTTTACCCCA
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