CB294011

Overview
NameCB294011
Unique NameCB294011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD2_DROPS (Adenylate kinase 2, mitochondrial OS=Drosophila pseudoobscura pseudoobscura GN=Adk2 PE=3 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 6.468e-22
Identity = 64/207 (30.92%), Postives = 104/207 (50.24%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENRAAFEAV---TKIEPEFVLFFDCSEEEMERRILNR-----------------------------NQGREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVFDAVKAVF 713
            LG PGSGKGTQ   + E +   HLS GD+LRAEI SGS+ GT ++ ++  GK+V  E+ + ++   +++    + FL+DGFPR        +++    K   + V+ F   +  + RRI  R                                R DDN E + KRL+ + + + P+V YY  +G   K+DAA+  ++VF  ++++F
Sbjct:   24 LGPPGSGKGTQAPLLKEKYCVCHLSTGDMLRAEISSGSKLGTELKKVMDAGKLVSDELVVDMIDSNLDKPECKNGFLLDGFPRTVVQAEKLDSLLDKRKANLDAVIEFAIDDSLLVRRITGRLIHQASGRSYHEEFAPPKVTMKDDITGEPLMRRSDDNAEALKKRLESYHKQTRPLVDYYGLRGLHYKVDAARKSSDVFSTIESIF 230          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_THEM4 (Adenylate kinase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=adk PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.447e-22
Identity = 61/203 (30.05%), Postives = 104/203 (51.23%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKI---EPEFVLFFDCSEEEMERRILNR----NQG-------------------------REDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVFDAV 701
            LG PG+GKGT    + E  G  H+S GD+ R EI + SE G  +++++K G++VP ++T  ++++ + +    K F++DG+PR      A + + K    E +F ++F+ SE+ + +RI NR    N G                         REDD  E + +R KV++ ++ PV++YY    K+  +D +  V  V   V
Sbjct:    6 LGPPGAGKGTYAKELKEILGIPHISTGDMFREEISAKSELGRKVEDILKRGELVPDDLTNVIVKERLSKPDCKKGFILDGYPRTVAQAKALDEILKKLGRELKFAIYFEVSEDVVVKRISNRRICKNCGKIYNLITLPPKINGKCDVCGGELYQREDDREEVVRRRYKVYMDNTYPVIEYYRKSNKLFTVDGSMDVDSVIKEV 208          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_PROM0 (Adenylate kinase OS=Prochlorococcus marinus (strain MIT 9301) GN=adk PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.447e-22
Identity = 56/174 (32.18%), Postives = 105/174 (60.34%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRN-EENRAAFEAVTKIEP--EFVLFFDCSEEEMERRILNRNQGREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVFDAVK 704
            LG PG+GKGTQ   I +   Y HLS G+LLR EI+  +  G  +++++  G++V  E+ +K++++ + +  N  +++DG+PRN  +  +  E + +I    E V + D  EE + +R+L R  GR+DD  ETI  R+ ++ +++ P++QY++    ++ IDA + +  +   +K
Sbjct:    8 LGAPGAGKGTQAELISQSNSYLHLSTGELLRKEIEMNTALGIQVKDIMNRGELVSDELVLKIVRQNLVKD-NKGWILDGYPRNLSQANSLNEVLNEINQPLELVFYLDIPEEVLIKRLLLR--GRKDDTEETIRTRVDIYKKTTEPLIQYFKDLSLIEYIDADRDLKTISSDIK 178          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_OENOB (Adenylate kinase OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=adk PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.447e-22
Identity = 59/177 (33.33%), Postives = 100/177 (56.50%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES---GNDKFLIDGFPRNEENRAAFEA-VTKIEPEF--VLFFDCSEEEMERRILNRNQGREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVFDAVK 704
            LG PG GKGT    +VE F   H+S GD+ R+ + + +E G   ++ +  G +VP E+T  ++ + + E+       F++DG+PRN     + E+ +  I+ +   V++ D SE+ +  R+L R  GREDD  E +  R+ V  + ++P+V+YY  KG +  IDA   V+ V+  +K
Sbjct:    8 LGLPGVGKGTNADIMVEDFKLPHISTGDIFRSAMANHTELGDKAKSFMDAGNLVPDEITNGIVNERLNEADVKDAGGFILDGYPRNTSQADSLESFLRSIQQKLNAVIYLDASEKTVTNRMLGR--GREDDTPEVVAHRIDVAKKETMPLVEYYRNKGSLYTIDANGEVSVVYPKIK 182          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_CORGL (Adenylate kinase OS=Corynebacterium glutamicum GN=adk PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 8.447e-22
Identity = 65/170 (38.24%), Postives = 97/170 (57.06%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES-GNDKFLIDGFPRNEENR---AAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIMKRLKVFLQSSLPVVQYY-------EAKGKVQKIDA 668
            LG PG+GKGTQ A + E  G  H+S GDL RA I  G+  G   +  I  GK+VP++VT +++   + ES   + FL+DGFPR  E     A   +      + V+ +  SE+ +  R+L+R  GR DDN ETI  RL V+   + P++ +Y       EA+G+V++I+A
Sbjct:    6 LGPPGAGKGTQAAILSEKLGIPHISTGDLFRANIGEGTPLGIEAKQYIDAGKLVPTDVTARMVASRLAESDAAEGFLLDGFPRTVEQADILANLLSEAGQTLDGVVNYQVSEDVVVERMLSR--GRADDNEETIRTRLGVYRDETAPLIDHYGDKIINIEAEGEVEEINA 173          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_CORGB (Adenylate kinase OS=Corynebacterium glutamicum (strain R) GN=adk PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.447e-22
Identity = 65/170 (38.24%), Postives = 97/170 (57.06%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES-GNDKFLIDGFPRNEENR---AAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIMKRLKVFLQSSLPVVQYY-------EAKGKVQKIDA 668
            LG PG+GKGTQ A + E  G  H+S GDL RA I  G+  G   +  I  GK+VP++VT +++   + ES   + FL+DGFPR  E     A   +      + V+ +  SE+ +  R+L+R  GR DDN ETI  RL V+   + P++ +Y       EA+G+V++I+A
Sbjct:    6 LGPPGAGKGTQAAILSEKLGIPHISTGDLFRANIGEGTPLGIEAKQYIDAGKLVPTDVTARMVASRLAESDAAEGFLLDGFPRTVEQADILANLLSEAGQTLDGVVNYQVSEDVVVERMLSR--GRADDNEETIRTRLGVYRDETAPLIDHYGDKIINIEAEGEVEEINA 173          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD2_DROWI (Adenylate kinase 2, mitochondrial OS=Drosophila willistoni GN=Adk2 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.447e-22
Identity = 66/207 (31.88%), Postives = 104/207 (50.24%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENRAAFEAV---TKIEPEFVLFFDCSEEEMERRILNR--NQG---------------------------REDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVFDAVKAVF 713
            LG PGSGKGTQ   + E F   HLS GD+LRAEI SGS+ G  ++ ++ EGK+V  E+ + ++   +++    + FL+DGFPR        + +    K   + V+ F   +  + RRI  R  +Q                            R DDN E + KRL+ + + + P+V YY  +G   K+DAA+  ++VF  + ++F
Sbjct:   24 LGPPGSGKGTQAPLLKEKFCVCHLSTGDMLRAEISSGSKLGAELKKVMDEGKLVSDELVVNMIDSNLDKPECKNGFLLDGFPRTVVQAQKLDTLLDKRKTNLDAVVEFSIDDNLLVRRITGRLIHQASGRSYHEEFAPPKQPMKDDITGEPLIRRSDDNAEALKKRLESYHKQTKPLVDYYGFRGLHFKVDAARKSSDVFSKIDSIF 230          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD2_DROER (Adenylate kinase 2, mitochondrial OS=Drosophila erecta GN=Adk2 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.447e-22
Identity = 67/207 (32.37%), Postives = 103/207 (49.76%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENRAAFEAV---TKIEPEFVLFFDCSEEEMERRILNR--NQG---------------------------REDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVFDAVKAVF 713
            LG PGSGKGTQ   + E F   HLS GD+LRAEI SGS+ G  ++ ++  GK+V  E+ + ++   +++    + FL+DGFPR        + +    K   + V+ F   +  + RRI  R  +Q                            R DDN E + KRL+ + + + P+V YY  +G   K+DAAK  ++VF A+  +F
Sbjct:   24 LGPPGSGKGTQAPLLKEKFCVCHLSTGDMLRAEISSGSKLGAELKKVMDAGKLVSDELVVDMIDSNLDKPECKNGFLLDGFPRTVVQAEKLDTLLDKRKTNLDAVIEFAIDDNLLVRRITGRLIHQASGRSYHEEFAPPKKSMTDDVTGEPLIRRSDDNAEALKKRLEAYHKQTRPLVDYYGLRGLHFKVDAAKKSSDVFSAIDNIF 230          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_PROM5 (Adenylate kinase OS=Prochlorococcus marinus (strain MIT 9515) GN=adk PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.103e-21
Identity = 57/174 (32.76%), Postives = 106/174 (60.92%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRN-EENRAAFEAVTKIEP--EFVLFFDCSEEEMERRILNRNQGREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVFDAVK 704
            LG PG+GKGTQ A + E   Y HLS G+LLR EI   +  G  +++++ +G++V  ++ ++++ K + +  N  +++DG+PRN  +  +  E +  I    E V + D  +E + +R+L R  GR+DDN ETI  RLK++ +++ P+++YY+    ++ I+A   +  + + +K
Sbjct:    8 LGPPGAGKGTQAAYLSEANSYLHLSTGELLRKEIDLDTYLGKQVKDIMNKGELVSDQLVLEIVNKNLSKD-NKGWILDGYPRNLSQVNSLNEVLMNINQPLEIVFYLDVPDEVLIKRLLLR--GRKDDNEETIKTRLKIYKETTEPLIEYYKNLSLLEYINADGDLKTISNDIK 178          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_COREF (Adenylate kinase OS=Corynebacterium efficiens GN=adk PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.103e-21
Identity = 65/170 (38.24%), Postives = 98/170 (57.65%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES-GNDKFLIDGFPRN-EENRAAFEAVTKI--EPEFVLFFDCSEEEMERRILNRNQGREDDNVETIMKRLKVFLQSSLPVVQYY-------EAKGKVQKIDA 668
            LG PG+GKGTQ A + E  G  H+S GDL RA I  G+  G   +  I  GK+VP++VT +++Q  + E+   + FL+DGFPR  E+     + + K     + V+ +  SE+ +  R+L+R  GR DDN ETI  RL V+   + P++ +Y       EA+G V+ I+A
Sbjct:    6 LGPPGAGKGTQAAILSEKLGIPHISTGDLFRANIGEGTPLGIEAKQYIDAGKLVPTDVTARMVQSRLAEADAAEGFLLDGFPRTVEQADILADLLDKAGNPLDGVINYQVSEDVVVERMLSR--GRADDNEETIRTRLGVYRDETAPLISHYGDKIINIEAEGSVEDINA 173          
The following BLAST results are available for this feature:
BLAST of CB294011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD2_DROPS6.468e-2230.92Adenylate kinase 2, mitochondrial OS=Drosophila ps... [more]
KAD_THEM48.447e-2230.05Adenylate kinase OS=Thermosipho melanesiensis (str... [more]
KAD_PROM08.447e-2232.18Adenylate kinase OS=Prochlorococcus marinus (strai... [more]
KAD_OENOB8.447e-2233.33Adenylate kinase OS=Oenococcus oeni (strain BAA-33... [more]
KAD_CORGL8.447e-2238.24Adenylate kinase OS=Corynebacterium glutamicum GN=... [more]
KAD_CORGB8.447e-2238.24Adenylate kinase OS=Corynebacterium glutamicum (st... [more]
KAD2_DROWI8.447e-2231.88Adenylate kinase 2, mitochondrial OS=Drosophila wi... [more]
KAD2_DROER8.447e-2232.37Adenylate kinase 2, mitochondrial OS=Drosophila er... [more]
KAD_PROM51.103e-2132.76Adenylate kinase OS=Prochlorococcus marinus (strai... [more]
KAD_COREF1.103e-2138.24Adenylate kinase OS=Corynebacterium efficiens GN=a... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS01_06bf01_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06bf01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB294011 ID=CB294011; Name=CB294011; organism=Citrus sinensis; type=EST; length=719bp
TTGGCATCCCTCTGCCTTCTTTCTTTCCCTCCATATTCTTCTCTCTCTCT
CCAAACAAAACAACGCTCGCAATTCGCTAAGATCGGTTATTCAGACTGAG
TTAGTTGGCGCTGATGGGAACTGTGGTTGAAACTCCTGTCAAGGAAGCAG
ATGCTACCGTAACTGTGAAGAAGCCCACTGTTGTTTTTGTTTTGGGTGGA
CCAGGCAGTGGAAAAGGAACCCAGTGCGCAAACATTGTTGAACACTTTGG
ATACACCCATCTCAGTGCTGGTGATCTTCTCAGAGCCGAAATCAAATCTG
GCTCTGAAAATGGAACCATGATTCAGAACATGATTAAAGAGGGAAAAATC
GTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAAGCAATGGAGGAAAG
TGGAAATGATAAATTTCTCATCGATGGTTTTCCCAGAAACGAGGAAAATC
GTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAGAATTCGTTCTGTTT
TTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATTTTGAATAGGAATCA
GGGAAGAGAAGATGATAACGTTGAGACAATTATGAAGCGGCTTAAGGTTT
TCTTACAATCTAGTCTCCCTGTGGTTCAATATTATGAAGCTAAGGGTAAA
GTTCAGAAGATTGATGCTGCAAAGCCTGTTGCAGAGGTTTTTGATGCTGT
TAAAGCTGTTTTTACCCCA
back to top