CB294011

Overview
NameCB294011
Unique NameCB294011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_HALSA (Adenylate kinase OS=Halobacterium salinarium GN=adk PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.400e-18
Identity = 59/205 (28.78%), Postives = 103/205 (50.24%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRA----EIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR--------------NQ---------------GREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVFDAVKA 707
            LG PG+GKGTQ   +V+ FG  H++ GD LRA    +I             +  G++VP  V  ++++ A++++  D +++DG+PRNE      +++T +  + VL+ D  E+E+  R+  R              NQ                REDD  ET  +R+ V+ +++ PVV+Y+  +G + ++D  +   EV+  V A
Sbjct:    9 LGAPGAGKGTQSRRLVDEFGVEHVTTGDALRANKTKDITHLDVEYDTPGAYMDAGELVPDAVVNEIVKTALDDA--DGYVLDGYPRNESQTEYLDSITDL--DVVLYLDVDEDELVGRLTGRRVCEDCGATFHVSFNQPETEGVCDACGGSLYQREDDTEETARERITVYEENTAPVVEYFREQGVLAEVDGERTPDEVWTDVAA 209          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_HALS3 (Adenylate kinase OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=adk PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.400e-18
Identity = 59/205 (28.78%), Postives = 103/205 (50.24%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRA----EIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR--------------NQ---------------GREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVFDAVKA 707
            LG PG+GKGTQ   +V+ FG  H++ GD LRA    +I             +  G++VP  V  ++++ A++++  D +++DG+PRNE      +++T +  + VL+ D  E+E+  R+  R              NQ                REDD  ET  +R+ V+ +++ PVV+Y+  +G + ++D  +   EV+  V A
Sbjct:    9 LGAPGAGKGTQSRRLVDEFGVEHVTTGDALRANKTKDITHLDVEYDTPGAYMDAGELVPDAVVNEIVKTALDDA--DGYVLDGYPRNESQTEYLDSITDL--DVVLYLDVDEDELVGRLTGRRVCEDCGATFHVSFNQPETEGVCDACGGSLYQREDDTEETARERITVYEENTAPVVEYFREQGVLAEVDGERTPDEVWTDVAA 209          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_DEIRA (Adenylate kinase OS=Deinococcus radiodurans GN=adk PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.400e-18
Identity = 52/181 (28.73%), Postives = 87/181 (48.07%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRN-----------EENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVFDAV 701
            LG PG+GKGTQ A + +      LS GD+LR  +  G+  G     +++ G++VP E+ I L++  + +    + + DGFPR            EE  A   AV  +E    +  D   +   + +      R DDN ET  KR +V+ + + P++ YY  +G +  +D      EV++ +
Sbjct:   12 LGPPGAGKGTQAARLAQEHQLVQLSTGDILRDHVARGTALGQQAGPLMEAGQLVPDELLIALIRDRLADMEPVRVIFDGFPRTQAQAEALDLLLEELGAPVSAVPLLEVPDQVLIDRIVDRGRQAVAEGRAPRADDNEETARKRQQVYREQTQPLIDYYARRGHLYTVDGLGTPDEVYERI 192          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_MARMM (Adenylate kinase OS=Maricaulis maris (strain MCS10) GN=adk PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.665e-18
Identity = 52/177 (29.38%), Postives = 94/177 (53.11%), Query Frame = 3
Query:  195 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES-GNDKFLIDGFPRNEENRAAFEAV---TKIEPEFVLFFDCSEEEMERRILNR--NQGREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVFDAVKA 707
            G PG GKGTQ   +V   G+  LS GD+LR    +G+E G  +  ++  G +V   + I+L+++ + E+      + DGFPR      A + +      + + V+    ++EE+ +R++ R   +GR DD  + I KRL+V+   + P++ ++  +GKV+ +D    + EV   + A
Sbjct:    7 GPPGCGKGTQSKRLVAERGWVQLSTGDMLRHARAAGTELGRRVAAIMDGGNLVSDAIVIELIEERLPEAKAAGGAIFDGFPRTVAQAQALDQLLLDRGTQVDSVIELKVNDEELVQRLVKRAEEEGRPDDTEDVIRKRLEVYYGQTAPLIPFFAQQGKVKAVDGMGSMDEVAAGIAA 183          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_HELPS (Adenylate kinase OS=Helicobacter pylori (strain Shi470) GN=adk PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.665e-18
Identity = 54/172 (31.40%), Postives = 88/172 (51.16%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFG--YTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVL----FFDCSEEEMERRILNRNQGREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEV 689
            +G PGSGK T    I ++      H S GDLLRAE    +E G +I+    +G++VP E+ ++ +  A++ S     LIDG+PR+ E   A +     + E VL      + SE   + R+L R++G  DDN      R++VFL     +  +Y+ K   + I+  + + E+
Sbjct:    8 IGAPGSGKTTDAELIAKNNSEKIAHFSTGDLLRAESAKKTERGLLIEKFTSQGELVPLEIVVETILSAIKSSDKGIILIDGYPRSVEQMQALDKELSAQNEVVLKSVIEVEVSENTAKERVLGRSRG-ADDNEMVFHNRMRVFLDPLGEIQNFYKNKKVYKAINGERSIEEI 178          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_CLOBM (Adenylate kinase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=adk PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.665e-18
Identity = 59/206 (28.64%), Postives = 96/206 (46.60%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRN------------------QG-----------REDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVFDAVKAV 710
            LG PG+GKGTQ   I E F   H+S GD+ RA IK  +  G   +  +  G++VP EVTI +++  + +   D  FL+DGFPR      A +   K    E +  L     EE +  R+  R                   +G           R+DD   T+ +RL+V+ + + P++ YY+  G + +++  + + EVF  +  +
Sbjct:    6 LGPPGAGKGTQAKLISEKFSIPHISTGDIFRANIKEKTPLGIEAKRYMDNGQLVPDEVTIGIVKDRLTKDDCDNGFLLDGFPRTVAQAEALDEFLKGINKELDVALLIKVPEEFILERMTGRRVCTSCGASYHIRFNPPKIEGKCDICDNELIQRKDDTEATVKERLEVYSKQTYPLINYYKDNGIISEVNGTESIDEVFGNISNI 211          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_BORGA (Adenylate kinase OS=Borrelia garinii GN=adk PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.665e-18
Identity = 59/197 (29.95%), Postives = 96/197 (48.73%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQ-KAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEF-VLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEV 689
            LG PGSGKGT    I   F Y H+S GDL R  I + +  G  I+ ++++G++VP ++TIK+++ K      ND F++DGFPR   N    EA+ K  P   ++ F  +EE + +R+  R                                REDD  E +  RLK +   + P++++Y    ++  +DA+  + E+
Sbjct:    6 LGPPGSGKGTISKIISNEFKYHHISTGDLFRENILNSTTLGKEIKKIVEKGELVPDQITIKIVKDKIKAIKKNDNFILDGFPR---NICQAEALDKFLPNVKIINFLINEELVIKRLSGRRICKSCNNIFNIYTLATKKNGICDVCKGDLYQREDDKEECLKTRLKEYKLQTKPLIEFYSKCSRLNNVDASVEIDEI 199          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_ZYMMO (Adenylate kinase OS=Zymomonas mobilis GN=adk PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.262e-17
Identity = 59/202 (29.21%), Postives = 95/202 (47.03%), Query Frame = 3
Query:  195 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLI-DGFPRNEENRAAFEAVTKIEPEFVLFFDC------SEEEMERRILNRN------------------------------QGREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEV 689
            G PG+GKGTQ   +V  FG   LS GD+LR  +K G+E G +   ++K GK++P ++ I++L + +++      +I DGFPR    +   EA+ K+  E     DC       E  + +RI+ R                               + R DDN E +  RL  + + + P++  YEA+G V  +D   P+ +V
Sbjct:    7 GPPGAGKGTQAHRLVHDFGMVQLSTGDILRQAVKEGTEVGKIAGELMKAGKLIPDDLMIRILGERLDKPDTKNGVIFDGFPR---TKPQVEALDKLLAERHSKLDCVIEIKVDENALVKRIVGRYVCAQCGAGYHDEFKRPHKEGVCDICGSTEFKRRPDDNEEAVRARLVEYHEKTAPILPVYEARGIVAYVDGMLPMGDV 205          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_THEON (Adenylate kinase OS=Thermococcus onnurineus (strain NA1) GN=adk PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.262e-17
Identity = 57/204 (27.94%), Postives = 99/204 (48.53%), Query Frame = 3
Query:  195 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAV-----TKIEPEFVLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVFDAVK 704
            G PGSGK T    I E +G T++S+GD++RAEI+ GSE G  ++  + +G+++P  V   L+   +    N+ F+IDG+PR  E   A E        +I+    +F   S+EE   RI  R                                REDD  E + KR  +++++  P++++Y+ +G   ++D    + EV++ ++
Sbjct:    7 GPPGSGKSTHSRTITERYGLTYISSGDMIRAEIEKGSELGKELKKYLAKGELIPDIVVNTLVISRLRRDRNN-FIIDGYPRTAEQVLALENYLYDHGIRIDVAMEIFI--SKEESVERISGRRICPKCGAVYHLRYRPPKVPGKCDLCGSQLIQREDDRSEIVAKRYDLYVKNMEPIIKFYKKQGIYVRVDGHGSINEVWERIR 207          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_MICLU (Adenylate kinase OS=Micrococcus luteus GN=adk PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.262e-17
Identity = 56/182 (30.77%), Postives = 95/182 (52.20%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPE---FVLFFDCSEEEMERRILNRN--QGREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVFD-AVKAVFT 716
            +G PGSGKGTQ   I +  G   +S GD+ R  +KS +  G   +  I  G  VP EVT +++  +  +      FL+DG+PR +    A +A+     +    V+  +  +EE+  R+L R   +GR DD  E I  RL ++ + +  V+Q Y  +G V ++D    + +V +  ++AV++
Sbjct:    7 MGPPGSGKGTQATRIADKLGIVPISTGDIFRHNVKSMTPLGVEAKRYIDNGDFVPDEVTNRMVADRIAQADAEHGFLLDGYPRTKGQVEALDAMLAEAGQSLSAVVELEVPDEELVERLLKRAEIEGRADDTQEVIEHRLDLYHRETESVIQEYVERGIVARVDGTGQIDDVTERLLQAVYS 188          
The following BLAST results are available for this feature:
BLAST of CB294011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_HALSA7.400e-1828.78Adenylate kinase OS=Halobacterium salinarium GN=ad... [more]
KAD_HALS37.400e-1828.78Adenylate kinase OS=Halobacterium salinarum (strai... [more]
KAD_DEIRA7.400e-1828.73Adenylate kinase OS=Deinococcus radiodurans GN=adk... [more]
KAD_MARMM9.665e-1829.38Adenylate kinase OS=Maricaulis maris (strain MCS10... [more]
KAD_HELPS9.665e-1831.40Adenylate kinase OS=Helicobacter pylori (strain Sh... [more]
KAD_CLOBM9.665e-1828.64Adenylate kinase OS=Clostridium botulinum (strain ... [more]
KAD_BORGA9.665e-1829.95Adenylate kinase OS=Borrelia garinii GN=adk PE=3 S... [more]
KAD_ZYMMO1.262e-1729.21Adenylate kinase OS=Zymomonas mobilis GN=adk PE=3 ... [more]
KAD_THEON1.262e-1727.94Adenylate kinase OS=Thermococcus onnurineus (strai... [more]
KAD_MICLU1.262e-1730.77Adenylate kinase OS=Micrococcus luteus GN=adk PE=3... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06bf01_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06bf01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB294011 ID=CB294011; Name=CB294011; organism=Citrus sinensis; type=EST; length=719bp
TTGGCATCCCTCTGCCTTCTTTCTTTCCCTCCATATTCTTCTCTCTCTCT
CCAAACAAAACAACGCTCGCAATTCGCTAAGATCGGTTATTCAGACTGAG
TTAGTTGGCGCTGATGGGAACTGTGGTTGAAACTCCTGTCAAGGAAGCAG
ATGCTACCGTAACTGTGAAGAAGCCCACTGTTGTTTTTGTTTTGGGTGGA
CCAGGCAGTGGAAAAGGAACCCAGTGCGCAAACATTGTTGAACACTTTGG
ATACACCCATCTCAGTGCTGGTGATCTTCTCAGAGCCGAAATCAAATCTG
GCTCTGAAAATGGAACCATGATTCAGAACATGATTAAAGAGGGAAAAATC
GTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAAGCAATGGAGGAAAG
TGGAAATGATAAATTTCTCATCGATGGTTTTCCCAGAAACGAGGAAAATC
GTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAGAATTCGTTCTGTTT
TTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATTTTGAATAGGAATCA
GGGAAGAGAAGATGATAACGTTGAGACAATTATGAAGCGGCTTAAGGTTT
TCTTACAATCTAGTCTCCCTGTGGTTCAATATTATGAAGCTAAGGGTAAA
GTTCAGAAGATTGATGCTGCAAAGCCTGTTGCAGAGGTTTTTGATGCTGT
TAAAGCTGTTTTTACCCCA
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