CB294011

Overview
NameCB294011
Unique NameCB294011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_METFK (Adenylate kinase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=adk PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.069e-16
Identity = 54/178 (30.34%), Postives = 89/178 (50.00%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQ-----------------------------GREDDNVETIMKRLKVFLQSSLPVVQYY 635
            LG PG+GKGTQ   I E F    +S GD+LRA +K+G++ G   +  +  G +VP +V I L+++ ++++     FL DGFPR      A +    ++ ++V+  D  +EE+ +R+  R                                R+DD  ET+ KRL+V+ + + P+V YY
Sbjct:    6 LGAPGAGKGTQATFIKEAFDIPQISTGDMLRAAVKAGTQLGLEAKRYMDSGGLVPDDVIIGLVKERIKDADCQQGFLFDGFPRTIPQAEAMKQ-AGVDIDYVVEIDVPDEEIIKRMSGRRTHLPSGRTYHVVFNPPKVAGKDDVTGEDLVQRDDDKEETVAKRLEVYHRQTKPLVDYY 182          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_CLOPS (Adenylate kinase OS=Clostridium perfringens (strain SM101 / Type A) GN=adk PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.069e-16
Identity = 53/203 (26.11%), Postives = 96/203 (47.29%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEPEFV---LFFDCSEEEMERRILNR------------------NQG-----------REDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVFDAV 701
            LG PG+GKGTQ  +I   +   H+S GD+ R  I   +  G   ++ +  G++VP EVTI +++  +++    + +L+DGFPR      A +       E +   L  +  +E +  R+  R                  N G           R+DD  ET+ +RL V+   + P++ +Y+ K ++  +D  + + EVF+++
Sbjct:    6 LGPPGAGKGTQAKSISNRYSIPHISTGDIFRKNISENTPLGIEAKSYMDNGQLVPDEVTINMVKDRLQQDDCKNGYLLDGFPRTVHQAEALDNFLTEREESIDTALLIEVPKEFILERMTGRRVCPSCGASYHIKFNPPTNDGKCDLCGSDVIQRKDDTEETVKERLDVYENQTQPLIDFYKNKKQLSVVDGTQAINEVFESI 208          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_CLOPE (Adenylate kinase OS=Clostridium perfringens GN=adk PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.069e-16
Identity = 53/203 (26.11%), Postives = 96/203 (47.29%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEPEFV---LFFDCSEEEMERRILNR------------------NQG-----------REDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVFDAV 701
            LG PG+GKGTQ  +I   +   H+S GD+ R  I   +  G   ++ +  G++VP EVTI +++  +++    + +L+DGFPR      A +       E +   L  +  +E +  R+  R                  N G           R+DD  ET+ +RL V+   + P++ +Y+ K ++  +D  + + EVF+++
Sbjct:    8 LGPPGAGKGTQAKSISNRYSIPHISTGDIFRKNISENTPLGIEAKSYMDNGQLVPDEVTINMVKDRLQQDDCKNGYLLDGFPRTVHQAEALDNFLTEREESIDTALLIEVPKEFILERMTGRRVCPSCGASYHIKFNPPTNDGKCDLCGSDVIQRKDDTEETVKERLDVYENQTQPLIDFYKNKKQLSVVDGTQAINEVFESI 210          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_CLOP1 (Adenylate kinase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=adk PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.069e-16
Identity = 53/203 (26.11%), Postives = 96/203 (47.29%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEPEFV---LFFDCSEEEMERRILNR------------------NQG-----------REDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVFDAV 701
            LG PG+GKGTQ  +I   +   H+S GD+ R  I   +  G   ++ +  G++VP EVTI +++  +++    + +L+DGFPR      A +       E +   L  +  +E +  R+  R                  N G           R+DD  ET+ +RL V+   + P++ +Y+ K ++  +D  + + EVF+++
Sbjct:    6 LGPPGAGKGTQAKSISNRYSIPHISTGDIFRKNISENTPLGIEAKSYMDNGQLVPDEVTINMVKDRLQQDDCKNGYLLDGFPRTVHQAEALDNFLTEREESIDTALLIEVPKEFILERMTGRRVCPSCGASYHIKFNPPTNDGKCDLCGSDVIQRKDDTEETVKERLDVYENQTQPLIDFYKNKKQLSVVDGTQAINEVFESI 208          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_CLOCE (Adenylate kinase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=adk PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.069e-16
Identity = 58/201 (28.86%), Postives = 95/201 (47.26%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGN----DKFLIDGFPRNEENRAAFEAV---TKIEPEFVLFFDCSEEEMERRILNR----NQG-------------------------REDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAE 686
            LG PG+GKGTQ   I E     H+S GD+ RA IK  +  G   +  + +G++VP E+T+++++   +  GN    + F++DGFPR        + V     I  +  L  D  +E++ +R+  R    N G                         R DD  ET++ RL+ + + + P++ YYE  GK++  + A  V E
Sbjct:    6 LGAPGAGKGTQAKIISEKLNIPHVSTGDIFRANIKGNTPLGQKAKEYMDKGELVPDELTVEIVK---DRLGNVDCVNGFILDGFPRTIPQAEYLDKVLVQMNINLDVALLIDVKDEDIIKRMSGRRVCTNCGATYNVVFNPTKVEGICDVCNSPVIQRADDAAETVLNRLETYHKQTQPLINYYEKAGKLKVAEGAGEVDE 203          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_TERTT (Adenylate kinase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=adk PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.396e-16
Identity = 61/209 (29.19%), Postives = 103/209 (49.28%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTK--IEPEFVLFFDCSEEEMERRILNR------------------NQG-----------REDDNVETIMKRLKVFLQSSLPVVQYYEAKG-------KVQKIDAAKPVAEVFDAV 701
            LG PG+GKGTQ   I+E F    +S GD+LRA +K+GS  G  +++++  G++V  ++ I L+++ + +    + FL DGFPR        EA+T+  +E E V+     +EE+  R+  R                   +G           R+DD  +T+  RL ++   + P+V+YY+ +        K  +I    P+AE+ D V
Sbjct:    6 LGAPGAGKGTQAKFIMEAFEIPQISTGDMLRAAVKAGSPLGVKVKDIMASGQLVSDDIIIDLVKERISKPDCANGFLFDGFPRTIPQA---EALTESGVEIEHVMEIHVDDEEIVARLSGRRVHEASGRIYHVTHNPPKTEGVDDITGEPLVQRDDDQEDTVRNRLSIYHDQTEPLVEYYQKQEAENPGTVKFTRIAGVGPLAEIKDKV 211          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_SPHWW (Adenylate kinase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=adk PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.396e-16
Identity = 55/207 (26.57%), Postives = 100/207 (48.31%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENRAAFEAVTKIEP---EFVLFFDCSEEEMERRILNR----NQG--------------------------REDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVFDAVKAV 710
            LG PG+GKGTQ + +V   G   LS GD+LRA +K+G+  G   + +++ G++V  E+   L+ + ++  + ++  + DG+PR E    + + +        + V+  +  E+ +  RI  R    N G                          R DDN ET+  R+  +   + P++  YEA+G V+++D    +A+V  A+ A+
Sbjct:    6 LGPPGAGKGTQASKLVADRGMVQLSTGDMLRAAVKAGTPIGLKAKAVMEAGELVSDEIVSGLIGEKLDSMAASEGAIFDGYPRTEAQAHSLDEILASRGRVLDHVIELEVDEDALVERITGRYTCANCGEGYHDRFKQPKVAGVCDVCGSAEFKRRPDDNEETVRTRMAEYRAKTAPILPVYEARGLVRRVDGMADMADVSAAIAAI 212          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_DECAR (Adenylate kinase OS=Dechloromonas aromatica (strain RCB) GN=adk PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.396e-16
Identity = 59/209 (28.23%), Postives = 95/209 (45.45%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQ-KAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQ-----------------------------GREDDNVETIMKRLKVFLQSSLPVVQYY-----EAKGKVQKIDAAKPVAEVFDAVKAVF 713
            LG PG+GKGTQ   I + FG   +S GD+LRA++K+G+  G   +  +  G +VP  V I +++ +  ++   + +L DGFPR      A +    +  EFVL  D  + ++  R+  R                                R+DD  ET+ KRL+++   + P+V +Y     E   K  K+     V  V +  K+VF
Sbjct:    6 LGAPGAGKGTQATFISKQFGIPQISTGDMLRAQVKAGTALGLEAKKHMDAGGLVPDAVIIGMVKDRLTQDDCKNGYLFDGFPRTIPQAQAMKD-AGVPIEFVLEIDVPDSDIVERMAGRRAHLASGRTYHVKFNPPKVEGIDDVTGEPLVQRDDDKEETVKKRLEIYHSQTKPLVDFYGKWAAEGDAKAPKVRKVAGVGSVDNITKSVF 213          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_BRUSU (Adenylate kinase OS=Brucella suis GN=adk PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.396e-16
Identity = 52/188 (27.66%), Postives = 90/188 (47.87%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAA-----------FEAVTKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVFDAVKAVFTP 719
            LG PG+GKGTQ   + +  G   LS GD+LRA +   SE G   + ++  G++V  E+  +++ + ++     + F++DG+PR      A            +AV +++ +        E  +   I    Q R DDN E   KRL  + + + P+  YY   G+++ I+   PV EV   ++ +  P
Sbjct:    6 LGPPGAGKGTQAGLLTKKHGIPQLSTGDMLRAAVAQQSEIGKRAKAVMDAGQLVSDEIVNQIVSERIDAPDCANGFILDGYPRTVPQAQALSQMLSGKGLKLDAVIELKVDENALVKRMESRVAETIAKGGQVRSDDNPEAFRKRLVEYREKTAPLSSYYAGTGELRVINGMAPVEEVTAEIERILVP 193          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_BRUSI (Adenylate kinase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=adk PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.396e-16
Identity = 52/188 (27.66%), Postives = 90/188 (47.87%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAA-----------FEAVTKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVFDAVKAVFTP 719
            LG PG+GKGTQ   + +  G   LS GD+LRA +   SE G   + ++  G++V  E+  +++ + ++     + F++DG+PR      A            +AV +++ +        E  +   I    Q R DDN E   KRL  + + + P+  YY   G+++ I+   PV EV   ++ +  P
Sbjct:    6 LGPPGAGKGTQAGLLTKKHGIPQLSTGDMLRAAVAQQSEIGKRAKAVMDAGQLVSDEIVNQIVSERIDAPDCANGFILDGYPRTVPQAQALSQMLSGKGLKLDAVIELKVDENALVKRMESRVAETIAKGGQVRSDDNPEAFRKRLVEYREKTAPLSSYYAGTGELRVINGMAPVEEVAAEIERILVP 193          
The following BLAST results are available for this feature:
BLAST of CB294011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_METFK1.069e-1630.34Adenylate kinase OS=Methylobacillus flagellatus (s... [more]
KAD_CLOPS1.069e-1626.11Adenylate kinase OS=Clostridium perfringens (strai... [more]
KAD_CLOPE1.069e-1626.11Adenylate kinase OS=Clostridium perfringens GN=adk... [more]
KAD_CLOP11.069e-1626.11Adenylate kinase OS=Clostridium perfringens (strai... [more]
KAD_CLOCE1.069e-1628.86Adenylate kinase OS=Clostridium cellulolyticum (st... [more]
KAD_TERTT1.396e-1629.19Adenylate kinase OS=Teredinibacter turnerae (strai... [more]
KAD_SPHWW1.396e-1626.57Adenylate kinase OS=Sphingomonas wittichii (strain... [more]
KAD_DECAR1.396e-1628.23Adenylate kinase OS=Dechloromonas aromatica (strai... [more]
KAD_BRUSU1.396e-1627.66Adenylate kinase OS=Brucella suis GN=adk PE=3 SV=1[more]
KAD_BRUSI1.396e-1627.66Adenylate kinase OS=Brucella suis (strain ATCC 234... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06bf01_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06bf01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB294011 ID=CB294011; Name=CB294011; organism=Citrus sinensis; type=EST; length=719bp
TTGGCATCCCTCTGCCTTCTTTCTTTCCCTCCATATTCTTCTCTCTCTCT
CCAAACAAAACAACGCTCGCAATTCGCTAAGATCGGTTATTCAGACTGAG
TTAGTTGGCGCTGATGGGAACTGTGGTTGAAACTCCTGTCAAGGAAGCAG
ATGCTACCGTAACTGTGAAGAAGCCCACTGTTGTTTTTGTTTTGGGTGGA
CCAGGCAGTGGAAAAGGAACCCAGTGCGCAAACATTGTTGAACACTTTGG
ATACACCCATCTCAGTGCTGGTGATCTTCTCAGAGCCGAAATCAAATCTG
GCTCTGAAAATGGAACCATGATTCAGAACATGATTAAAGAGGGAAAAATC
GTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAAGCAATGGAGGAAAG
TGGAAATGATAAATTTCTCATCGATGGTTTTCCCAGAAACGAGGAAAATC
GTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAGAATTCGTTCTGTTT
TTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATTTTGAATAGGAATCA
GGGAAGAGAAGATGATAACGTTGAGACAATTATGAAGCGGCTTAAGGTTT
TCTTACAATCTAGTCTCCCTGTGGTTCAATATTATGAAGCTAAGGGTAAA
GTTCAGAAGATTGATGCTGCAAAGCCTGTTGCAGAGGTTTTTGATGCTGT
TAAAGCTGTTTTTACCCCA
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