CB294014

Overview
NameCB294014
Unique NameCB294014
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB294014 vs. ExPASy Swiss-Prot
Match: INT4_ARATH (Inositol transporter 4 OS=Arabidopsis thaliana GN=INT4 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.265e-18
Identity = 59/184 (32.07%), Postives = 91/184 (49.46%), Query Frame = 3
Query:  243 YASGAAILASMTSILLGYDIGVMSGAALYIKDDLKVSDTKIEILMGILNIY---SLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFGAGIGVGYALMIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLGWRMMLGIGAIPSVLLAVGVLAM 785
            Y    A+ A +  +L GYD GV+SGA L+IK+D    D K  +   I+++    +++G+   G  +D  GRR +I+                     ++ GR   G GVG A M +P+Y +E SPA  RG L S   + I GG    Y+ N  F   P    WR MLG+  +P+++  V +L++
Sbjct:   26 YIMRLALSAGIGGLLFGYDTGVISGALLFIKEDFDEVDKKTWLQSTIVSMAVAGAIVGAAVGGWINDKFGRRMSILIADVLFLIGAIVMAFAPAPWVIIVGRIFVGFGVGMASMTSPLYISEASPARIRGALVSTNGLLITGGQFFSYLINLAFVHTP--GTWRWMLGVAGVPAIVQFVLMLSL 207          
BLAST of CB294014 vs. ExPASy Swiss-Prot
Match: MSSP2_ARATH (Monosaccharide-sensing protein 2 OS=Arabidopsis thaliana GN=MSSP2 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.958e-18
Identity = 56/173 (32.37%), Postives = 91/173 (52.60%), Query Frame = 3
Query:  258 AILASMTSILLGYDIGVMSGAALYIKDDLKV-SDTKIEILMGILNIYSLIGSL----AAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFGAGIGVGYALMIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLGWRMMLGIGAIPSVL 761
            AI A++ ++L G+D   ++GA LYIK +  + S+  +E   G++   SLIG+      +G  +DW+GRR  ++                 N   L+ GR   G GVG  + + P+Y +E +P   RG L + P+   +GG+ L Y   +G S +P    WR+MLG+  IPS++
Sbjct:    8 AIAAAVGNLLQGWDNATIAGAVLYIKKEFNLESNPSVE---GLIVAMSLIGATLITTCSGGVADWLGRRPMLILSSILYFVGSLVMLWSPNVYVLLLGRLLDGFGVGLVVTLVPIYISETAPPEIRGLLNTLPQFTGSGGMFLSYCMVFGMSLMP-SPSWRLMLGVLFIPSLV 176          
BLAST of CB294014 vs. ExPASy Swiss-Prot
Match: GTR12_MOUSE (Solute carrier family 2, facilitated glucose transporter member 12 OS=Mus musculus GN=Slc2a12 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.590e-18
Identity = 53/173 (30.64%), Postives = 90/173 (52.02%), Query Frame = 3
Query:  258 AILASMTSILLGYDIGVMSGAALYIKDDLKVSDTKIEILMGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFGAGIGVGYALMIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLGWRMMLGIGAIPSVLLAVGV 776
            ++ A+++ +L+GY++G++SGA L I+  L ++  + E+++  L I + + SL  G   D  GRR  I+                 +Y  L+ GR   G+ +  + +   VY AE++P   RG L S  E+ I  GIL  Y+SNY F+   +  GW+ M G+     VL A+ +
Sbjct:   48 SVTAAISGLLVGYELGLISGALLQIRTLLALTCHEQEMVVSSLLIGAFLASLTGGVLIDRYGRRLAIILSSCLLGLGSLVLIMSLSYTLLIMGRVAIGVSISLSSIATCVYIAEIAPQHRRGLLVSLNELMIVTGILFAYISNYAFAN--ISNGWKYMFGLVIPLGVLQAIAM 218          
BLAST of CB294014 vs. ExPASy Swiss-Prot
Match: PLST4_ARATH (Plastidic glucose transporter 4 OS=Arabidopsis thaliana GN=At5g16150 PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.124e-17
Identity = 56/173 (32.37%), Postives = 88/173 (50.87%), Query Frame = 3
Query:  264 LASMTSILLGYDIGVMSGAALYIKDDLKVSDTKI--EILMGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFGAGIGVGYALMIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLGWRMMLGIGAIPSVLLAVGV 776
            +A + +IL GY +GV++GA  Y+  DL +++  +    ++  L   + +GS   G  +D  GR  T                   +   ++ GR  AGIG+G +  I P+Y +E+SP   RG L S  ++FI  GIL   ++    +  P  L WR M G+  IPSVLLA+G+
Sbjct:  111 VACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGALADKFGRTRTFQLDAIPLAIGAFLCATAQSVQTMIVGRLLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICIGILAALIAGLPLAANP--LWWRTMFGVAVIPSVLLAIGM 281          
BLAST of CB294014 vs. ExPASy Swiss-Prot
Match: MSSP3_ARATH (Monosaccharide-sensing protein 3 OS=Arabidopsis thaliana GN=MSSP3 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.579e-17
Identity = 55/172 (31.98%), Postives = 91/172 (52.91%), Query Frame = 3
Query:  258 AILASMTSILLGYDIGVMSGAALYIKDDLKVS-DTKIEILMGILNIYSLIGSLA----AGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFGAGIGVGYALMIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLGWRMMLGIGAIPSV 758
            A+ A++ ++L G+D   ++GA +YIK +  +  + KIE   G++   SLIG+      +G  SD +GRR  ++                 N   L+  R   G G+G A+ + P+Y +E +P+  RG L +FP+   +GG+ L Y   +G S L     WR+MLG+ +IPS+
Sbjct:    8 ALAAAIGNMLQGWDNATIAGAVIYIKKEFHLEKEPKIE---GLIVAMSLIGATLITTFSGPVSDKVGRRSMLILSSVLYFLSSIVMFWSPNVYVLLFARLLDGFGIGLAVTLVPIYISETAPSEIRGLLNTFPQFCGSGGMFLSYCLVFGMS-LQESPSWRLMLGVLSIPSI 175          
BLAST of CB294014 vs. ExPASy Swiss-Prot
Match: GALP_ECOLI (Galactose-proton symporter OS=Escherichia coli (strain K12) GN=galP PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.516e-17
Identity = 52/171 (30.41%), Postives = 90/171 (52.63%), Query Frame = 3
Query:  264 LASMTSILLGYDIGVMSGAALYIKDDLKVSDTKIEILMGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFGAGIGVGYALMIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLGWRMMLGIGAIPSVLLAVGV 776
            LA++  +L G DIGV++GA  +I D+ +++    E ++  +   + +G++ +G  S  +GR+ +++                 N   L+  R   G+ VG A   AP+Y +E++P   RG + S  ++ I  GIL  Y+S+  FS       WR MLG+  IP++LL +GV
Sbjct:   21 LAALAGLLFGLDIGVIAGALPFIADEFQITSHTQEWVVSSMMFGAAVGAVGSGWLSFKLGRKKSLMIGAILFVAGSLFSAAAPNVEVLILSRVLLGLAVGVASYTAPLYLSEIAPEKIRGSMISMYQLMITIGILGAYLSDTAFSYTG---AWRWMLGVIIIPAILLLIGV 188          
BLAST of CB294014 vs. ExPASy Swiss-Prot
Match: GALP_ECOL6 (Galactose-proton symporter OS=Escherichia coli O6 GN=galP PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.516e-17
Identity = 52/171 (30.41%), Postives = 90/171 (52.63%), Query Frame = 3
Query:  264 LASMTSILLGYDIGVMSGAALYIKDDLKVSDTKIEILMGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFGAGIGVGYALMIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLGWRMMLGIGAIPSVLLAVGV 776
            LA++  +L G DIGV++GA  +I D+ +++    E ++  +   + +G++ +G  S  +GR+ +++                 N   L+  R   G+ VG A   AP+Y +E++P   RG + S  ++ I  GIL  Y+S+  FS       WR MLG+  IP++LL +GV
Sbjct:   21 LAALAGLLFGLDIGVIAGALPFIADEFQITSHTQEWVVSSMMFGAAVGAVGSGWLSFKLGRKKSLMIGAILFVAGSLFSAAAPNVEVLILSRVLLGLAVGVASYTAPLYLSEIAPEKIRGSMISMYQLMITIGILGAYLSDTAFSYTG---AWRWMLGVIIIPAILLLIGV 188          
BLAST of CB294014 vs. ExPASy Swiss-Prot
Match: ARAE_ECOLI (Arabinose-proton symporter OS=Escherichia coli (strain K12) GN=araE PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.623e-16
Identity = 56/183 (30.60%), Postives = 97/183 (53.01%), Query Frame = 3
Query:  231 KRNLYASGAAILASMTSILLGYDIGVMSGAALYIKDDLKVSDTKIEILMGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFGAGIGVGYALMIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLGWRMMLGIGAIPSVLLAVGVL 779
            + N++ S AA +A +   L G DIGV++GA  +I D   ++    E ++  + + + IG+L  G  S  +GR+Y+++                T+   L+  R   GI VG A   AP+Y +E++  + RG + S  ++ +  GI+L ++S+  FS       WR MLG+ A+P+VLL + V+
Sbjct:   20 RMNMFVSVAAAVAGL---LFGLDIGVIAGALPFITDHFVLTSRLQEWVVSSMMLGAAIGALFNGWLSFRLGRKYSLMAGAILFVLGSIGSAFATSVEMLIAARVVLGIAVGIASYTAPLYLSEMASENVRGKMISMYQLMVTLGIVLAFLSDTAFSYSG---NWRAMLGVLALPAVLLIILVV 196          
BLAST of CB294014 vs. ExPASy Swiss-Prot
Match: ARAE_ECO57 (Arabinose-proton symporter OS=Escherichia coli O157:H7 GN=araE PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.623e-16
Identity = 56/183 (30.60%), Postives = 97/183 (53.01%), Query Frame = 3
Query:  231 KRNLYASGAAILASMTSILLGYDIGVMSGAALYIKDDLKVSDTKIEILMGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFGAGIGVGYALMIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLGWRMMLGIGAIPSVLLAVGVL 779
            + N++ S AA +A +   L G DIGV++GA  +I D   ++    E ++  + + + IG+L  G  S  +GR+Y+++                T+   L+  R   GI VG A   AP+Y +E++  + RG + S  ++ +  GI+L ++S+  FS       WR MLG+ A+P+VLL + V+
Sbjct:   20 RMNMFVSVAAAVAGL---LFGLDIGVIAGALPFITDHFVLTSRLQEWVVSSMMLGAAIGALFNGWLSFRLGRKYSLMAGAILFVLGSIGSAFATSVEMLIAARVVLGIAVGIASYTAPLYLSEMASENVRGKMISMYQLMVTLGIVLAFLSDTAFSYSG---NWRAMLGVLALPAVLLIILVV 196          
BLAST of CB294014 vs. ExPASy Swiss-Prot
Match: ARAE_KLEOX (Arabinose-proton symporter OS=Klebsiella oxytoca GN=araE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.723e-16
Identity = 51/174 (29.31%), Postives = 93/174 (53.45%), Query Frame = 3
Query:  258 AILASMTSILLGYDIGVMSGAALYIKDDLKVSDTKIEILMGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFGAGIGVGYALMIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLGWRMMLGIGAIPSVLLAVGVL 779
            +I A++  +L G DIGV++GA  +I D   +S    E ++  + + + IG+L  G  S  +GR+Y+++                T+   L+  R   G+ VG A   AP+Y +E++  + RG + S  ++ +  GI++ ++S+  FS       WR MLG+ A+P+V+L + V+
Sbjct:   26 SIAAAVAGLLFGLDIGVIAGALPFITDHFVLSSRLQEWVVSSMMLGAAIGALFNGWLSFRLGRKYSLMVGAVLFVAGSVGSAFATSVEMLLVARIVLGVAVGIASYTAPLYLSEMASENVRGKMISMYQLMVTLGIVMAFLSDTAFSYSG---NWRAMLGVLALPAVVLIILVI 196          
The following BLAST results are available for this feature:
BLAST of CB294014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
INT4_ARATH2.265e-1832.07Inositol transporter 4 OS=Arabidopsis thaliana GN=... [more]
MSSP2_ARATH2.958e-1832.37Monosaccharide-sensing protein 2 OS=Arabidopsis th... [more]
GTR12_MOUSE6.590e-1830.64Solute carrier family 2, facilitated glucose trans... [more]
PLST4_ARATH1.124e-1732.37Plastidic glucose transporter 4 OS=Arabidopsis tha... [more]
MSSP3_ARATH5.579e-1731.98Monosaccharide-sensing protein 3 OS=Arabidopsis th... [more]
GALP_ECOLI9.516e-1730.41Galactose-proton symporter OS=Escherichia coli (st... [more]
GALP_ECOL69.516e-1730.41Galactose-proton symporter OS=Escherichia coli O6 ... [more]
ARAE_ECOLI1.623e-1630.60Arabinose-proton symporter OS=Escherichia coli (st... [more]
ARAE_ECO571.623e-1630.60Arabinose-proton symporter OS=Escherichia coli O15... [more]
ARAE_KLEOX4.723e-1629.31Arabinose-proton symporter OS=Klebsiella oxytoca G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06cg05_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06cg05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB294014 ID=CB294014; Name=CB294014; organism=Citrus sinensis; type=EST; length=786bp
GCACACACAAGGCTTCTTGTTTTTGTAGTAGTTTCATGGCAGCTTGAGTT
TCTATCTCTTCTTCCAAACCCTAGCTTACATAATTAAACACTCGCAGTCT
CTCTCTCTCTCGCTCTCTAGCTAGCTAGCTTAGCAACAACATGGCTGCAG
GCTTGGGAACCGAGAGCAACAACAATACTGACCCTCAAAACCAAAAAACT
CTTGCGGATTTTGATCCCCAAAAGAAACCAAAAAGAAATCTGTATGCCTC
CGGCGCTGCCATTTTGGCTTCCATGACTTCAATCTTACTAGGTTATGACA
TTGGAGTAATGAGTGGAGCTGCACTCTACATCAAAGACGACTTGAAAGTC
AGTGACACAAAAATCGAGATCTTAATGGGAATCTTGAATATTTACTCACT
CATCGGCTCACTGGCTGCCGGCAGAACCTCCGACTGGATTGGCCGCCGGT
ACACTATCGTGTTAGCCGGGGCCATCTTCTTCGCCGGAGCGCTGCTCATG
GGGTTCGCCACAAACTACGCTTTCCTCATGGGGGGTCGCTTCGGCGCCGG
TATCGGCGTCGGATACGCTCTCATGATCGCTCCCGTTTACACAGCTGAAC
TTTCTCCGGCTTCTACTCGAGGCTTTCTCACCTCATTTCCTGAGGTTTTC
ATTAACGGCGGGATATTACTTGGCTACGTCTCGAACTACGGATTCTCCAA
ACTACCCCTCCACTTAGGCTGGCGCATGATGCTCGGAATCGGCGCCATTC
CGTCGGTGCTTCTCGCCGTCGGCGTGTTAGCCATGC
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