CB294014

Overview
NameCB294014
Unique NameCB294014
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB294014 vs. ExPASy Swiss-Prot
Match: GTR12_DANRE (Solute carrier family 2, facilitated glucose transporter member 12 OS=Danio rerio GN=slc2a12 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 8.907e-15
Identity = 52/174 (29.89%), Postives = 93/174 (53.45%), Query Frame = 3
Query:  264 LASMTSILLGYDIGVMSGAALYIKDDLKVSDTKIEILMGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFGAGIGVGYALMIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLGWRMMLGIGAIPSVLLAVGVLAM 785
            +A ++ +L+GY++ ++SGA L ++D L +S  + E ++G L + + + SL  G   D  GRR+TI+                 ++  L+ GR   G+ V  +   + +Y AE++PA+ RG      E+ +  G+LLG+  ++ F+ +P   GWR   G GA+   LL  GV+ +
Sbjct:   50 VACLSGLLMGYEMSLISGALLQLRDVLTLSCPEQEQVVGSLLLGAFLLSLGGGTILDHYGRRFTIILTALLCVLGTLLSVCVVSFWALVVGRMLVGMSVALSGTASCLYAAEVAPAAWRGRCVCVYELMVVLGMLLGFGLSWAFAGVP--DGWRFTFG-GALLPALLQAGVMPL 220          
BLAST of CB294014 vs. ExPASy Swiss-Prot
Match: STP5_ARATH (Sugar transport protein 5 OS=Arabidopsis thaliana GN=STP5 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.163e-14
Identity = 57/195 (29.23%), Postives = 86/195 (44.10%), Query Frame = 3
Query:  255 AAILASMTSILLGYDIGVMSGAALYIKDDL---------KVSDTKIEI-----------LMGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFGAGIGVGYALMIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLGWRMMLGIGAIPSVLLAVGVL 779
            + I+A+   ++ GYDIG+ SG    +K  L         K S+ K  +               L +  L+ SL A R +   GRR T++                 N A L+ GR   G GVG+    APVY +E++P   RG        FI+ G++   + NYG        GWR+ LG+ A+P+ ++ VG L
Sbjct:   27 SCIVAASCGLIFGYDIGI-SGGVTTMKPFLEKFFPSVLKKASEAKTNVYCVYDSQLLTAFTSSLYVAGLVASLVASRLTAAYGRRTTMILGGFTFLFGALINGLAANIAMLISGRILLGFGVGFTNQAAPVYLSEVAPPRWRGAFNIGFSCFISMGVVAANLINYGTDS--HRNGWRISLGLAAVPAAIMTVGCL 218          
BLAST of CB294014 vs. ExPASy Swiss-Prot
Match: GTR10_HUMAN (Solute carrier family 2, facilitated glucose transporter member 10 OS=Homo sapiens GN=SLC2A10 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.163e-14
Identity = 54/174 (31.03%), Postives = 83/174 (47.70%), Query Frame = 3
Query:  258 AILASMTSILLGYDIGVMSGAALYIKDDLKVSDTKIEILMGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFGAGIGVGYALMIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLGWRMMLGIGAIPSVLLAVGVL 779
            A ++ +  +  GY++ V+SGA L ++ D  +S  + E L+G L + +L+ SL  G   D  GR+  I+                 + A+L+ GR   G  +  + M   +Y +EL     RG L S  E  I  GILL Y  NY  +  P   GWR M G    P+VL ++ +L
Sbjct:   12 ASVSLLGGLTFGYELAVISGALLPLQLDFGLSCLEQEFLVGSLLLGALLASLVGGFLIDCYGRKQAILGSNLVLLAGSLTLGLAGSLAWLVLGRAVVGFAISLSSMACCIYVSELVGPRQRGVLVSLYEAGITVGILLSYALNYALAGTP--WGWRHMFGWATAPAVLQSLSLL 183          
BLAST of CB294014 vs. ExPASy Swiss-Prot
Match: ITR2_YEAST (Myo-inositol transporter 2 OS=Saccharomyces cerevisiae GN=ITR2 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.519e-14
Identity = 50/172 (29.07%), Postives = 86/172 (50.00%), Query Frame = 3
Query:  264 LASMTSILLGYDIGVMSGAALYIKDDLKVSDTKI------EILMGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFGAGIGVGYALMIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLGWRMMLGIGAIPSVL 761
            +AS++  + GYD G +S A + I  DL   D K+      E++    ++ +LI S+ AG  +D  GRR  ++                  +  +  GR   G GVG   +I+P++ +E++P   RG LT    +++ GG L+ Y    G +   +  GWR+++G+  IP+VL
Sbjct:  115 VASISGFMFGYDTGYISSALISINRDL---DNKVLTYGEKELITAATSLGALITSVGAGTAADVFGRRPCLMFSNLMFLIGAILQITAHKFWQMAAGRLIMGFGVGIGSLISPLFISEIAPKMIRGRLTVINSLWLTGGQLIAYGCGAGLNH--VKNGWRILVGLSLIPTVL 281          
BLAST of CB294014 vs. ExPASy Swiss-Prot
Match: IOLT_BACSU (Major myo-inositol transporter iolT OS=Bacillus subtilis GN=iolT PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.984e-14
Identity = 54/179 (30.17%), Postives = 88/179 (49.16%), Query Frame = 3
Query:  261 ILASMTSILLGYDIGVMSGAALYI--KDDLKVSDTKIEILMGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFGAGIGVGYALMIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSN--YGFSKLPLHLGWRMMLGIGAIPSVLLAVGVLAM 785
            ++++   +L GYD GV++GA  Y+   D L ++     ++   L   + +G++  GR SD+ GRR  I+                 N   ++  RF  GI VG A +  P Y AE+SP  +RG + +  E+ I  G LL +V N   G +       WR ML I ++P++ L  G++ M
Sbjct:   16 LVSTFGGLLFGYDTGVLNGALPYMGEPDQLNLNAFTEGLVTSSLLFGAALGAVFGGRMSDFNGRRKNILFLAVIFFISTIGCTFAPNVTVMIISRFVLGIAVGGASVTVPAYLAEMSPVESRGRMVTQNELMIVSGQLLAFVFNAILGTTMGDNSHVWRFMLVIASLPALFLFFGMIRM 194          
BLAST of CB294014 vs. ExPASy Swiss-Prot
Match: GTR10_MOUSE (Solute carrier family 2, facilitated glucose transporter member 10 OS=Mus musculus GN=Slc2a10 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.591e-14
Identity = 55/187 (29.41%), Postives = 89/187 (47.59%), Query Frame = 3
Query:  225 KPKRNLYASGAAILASMTSILLGYDIGVMSGAALYIKDDLKVSDTKIEILMGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFGAGIGVGYALMIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLGWRMMLGIGAIPSVLLAVGVLAM 785
            +P   L  +  ++L  +T    GY++ V+SGA L ++ +  +S  + E+L+G L + +L+ SL  G   D  GRR  I+                ++  +L+ GR   G  +  + M   +Y +EL     RG L S  EV I  GIL  Y  NY  +  P   GWR M G  A P++L ++ +  +
Sbjct:    4 RPAVLLLCASVSLLGGLT---FGYELAVISGALLPLQLNFGLSCLEQELLVGSLLLGALLASLVGGFLIDCYGRRRAILGSNAVLLAGSLILGLASSLPWLLLGRLSVGFAISLSSMACCIYVSELVGPRQRGVLVSLYEVGITVGILFSYGLNYVLAGSP--WGWRHMFGWAAAPALLQSLSLFLL 185          
BLAST of CB294014 vs. ExPASy Swiss-Prot
Match: ERDL4_ARATH (Sugar transporter ERD6-like 4 OS=Arabidopsis thaliana GN=At1g19450 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.540e-14
Identity = 44/172 (25.58%), Postives = 87/172 (50.58%), Query Frame = 3
Query:  261 ILASMTSILLGYDIGVMSGAALYIKDDLKVSDTKIEILMGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFGAGIGVGYALMIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLGWRMMLGIGAIPSVLLAVGV 776
            ++ ++  I  G+  G  S     I  DL ++ ++  +   + N+ +++G++A+G+ ++++GR+ +++                 + +FL  GR   G GVG      PVY AE++P + RG L S  ++ +  GI+L Y+       L L + WR++  +G +P  LL  G+
Sbjct:   54 LIVALGPIQFGFTCGYSSPTQAAITKDLGLTVSEYSVFGSLSNVGAMVGAIASGQIAEYVGRKGSLMIAAIPNIIGWLSISFAKDTSFLYMGRLLEGFGVGIISYTVPVYIAEIAPQTMRGALGSVNQLSVTIGIMLAYL-------LGLFVPWRILAVLGVLPCTLLIPGL 218          
BLAST of CB294014 vs. ExPASy Swiss-Prot
Match: STP6_ARATH (Sugar transport protein 6 OS=Arabidopsis thaliana GN=STP6 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.847e-14
Identity = 53/207 (25.60%), Postives = 91/207 (43.96%), Query Frame = 3
Query:  216 PQKKPKRNLYASGAAILASMTSILLGYDIGVMSGAAL---YIKDDL----------------KVSDTKIEILMGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFGAGIGVGYALMIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLGWRMMLGIGAIPSVLLAVGVL 779
            P  + K  +Y     ++A++  ++ GYDIG+  G +    ++K+                  K  +  +++    L + +L+ S  A  T   +GRR T+                  N   L+ GR   G GVG+     P++ +E++PA  RG L    ++ +  GIL+  + NY F+      GWR+ LG   IP+V+L  G L
Sbjct:   11 PAFEAKMTVYVFICVMIAAVGGLIFGYDIGISGGVSAMDDFLKEFFPAVWERKKHVHENNYCKYDNQFLQLFTSSLYLAALVASFVASATCSKLGRRPTMQFASIFFLIGVGLTAGAVNLVMLIIGRLFLGFGVGFGNQAVPLFLSEIAPAQLRGGLNIVFQLMVTIGILIANIVNY-FTATVHPYGWRIALGGAGIPAVILLFGSL 216          
BLAST of CB294014 vs. ExPASy Swiss-Prot
Match: ERDL6_ARATH (Sugar transporter ERD6-like 6 OS=Arabidopsis thaliana GN=At1g75220 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.847e-14
Identity = 45/172 (26.16%), Postives = 87/172 (50.58%), Query Frame = 3
Query:  261 ILASMTSILLGYDIGVMSGAALYIKDDLKVSDTKIEILMGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFGAGIGVGYALMIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLGWRMMLGIGAIPSVLLAVGV 776
            ++ ++  I  G+  G  S     I  DL ++ ++  +   + N+ +++G++A+G+ +++IGR+ +++                 + +FL  GR   G GVG      PVY AE++P + RG L S  ++ +  GI+L Y+       L L + WR++  +G +P  LL  G+
Sbjct:   53 LIVALGPIQFGFTCGYSSPTQAAITKDLGLTVSEYSVFGSLSNVGAMVGAIASGQIAEYIGRKGSLMIAAIPNIIGWLCISFAKDTSFLYMGRLLEGFGVGIISYTVPVYIAEIAPQNMRGGLGSVNQLSVTIGIMLAYL-------LGLFVPWRILAVLGILPCTLLIPGL 217          
BLAST of CB294014 vs. ExPASy Swiss-Prot
Match: YNCC_BACSU (Putative metabolite transport protein yncC OS=Bacillus subtilis GN=yncC PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.286e-13
Identity = 54/177 (30.51%), Postives = 84/177 (47.46%), Query Frame = 3
Query:  261 ILASMTSILLGYDIGVMSGAALYIK--DDLKVSDTKIEILMGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFGAGIGVGYALMIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLG--WRMMLGIGAIPSVLLAVGVL 779
            I A+   +L GYD GV++GA  ++   D L ++     ++  IL + +  G+L  GR +D  GRR  I+                 N   +   RF  G+ VG A  + P + AE++P   RG + +  E+ I GG  L YV N        + G  WR ML I A+P+++L   +L
Sbjct:   16 ISATFGGLLFGYDTGVINGALPFMARPDQLDLTPVTEGLVTSILLLGAAFGALLCGRLADRYGRRKMILNLSFLFFLASLGTALAPNVFIMAVFRFLLGLAVGGASAMVPAFLAEMAPHEKRGRMVTQNELMIVGGQFLAYVFNAILGVTMANTGHVWRYMLVICAVPAIMLFASML 192          
The following BLAST results are available for this feature:
BLAST of CB294014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
GTR12_DANRE8.907e-1529.89Solute carrier family 2, facilitated glucose trans... [more]
STP5_ARATH1.163e-1429.23Sugar transport protein 5 OS=Arabidopsis thaliana ... [more]
GTR10_HUMAN1.163e-1431.03Solute carrier family 2, facilitated glucose trans... [more]
ITR2_YEAST1.519e-1429.07Myo-inositol transporter 2 OS=Saccharomyces cerevi... [more]
IOLT_BACSU1.984e-1430.17Major myo-inositol transporter iolT OS=Bacillus su... [more]
GTR10_MOUSE2.591e-1429.41Solute carrier family 2, facilitated glucose trans... [more]
ERDL4_ARATH7.540e-1425.58Sugar transporter ERD6-like 4 OS=Arabidopsis thali... [more]
STP6_ARATH9.847e-1425.60Sugar transport protein 6 OS=Arabidopsis thaliana ... [more]
ERDL6_ARATH9.847e-1426.16Sugar transporter ERD6-like 6 OS=Arabidopsis thali... [more]
YNCC_BACSU1.286e-1330.51Putative metabolite transport protein yncC OS=Baci... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06cg05_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06cg05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB294014 ID=CB294014; Name=CB294014; organism=Citrus sinensis; type=EST; length=786bp
GCACACACAAGGCTTCTTGTTTTTGTAGTAGTTTCATGGCAGCTTGAGTT
TCTATCTCTTCTTCCAAACCCTAGCTTACATAATTAAACACTCGCAGTCT
CTCTCTCTCTCGCTCTCTAGCTAGCTAGCTTAGCAACAACATGGCTGCAG
GCTTGGGAACCGAGAGCAACAACAATACTGACCCTCAAAACCAAAAAACT
CTTGCGGATTTTGATCCCCAAAAGAAACCAAAAAGAAATCTGTATGCCTC
CGGCGCTGCCATTTTGGCTTCCATGACTTCAATCTTACTAGGTTATGACA
TTGGAGTAATGAGTGGAGCTGCACTCTACATCAAAGACGACTTGAAAGTC
AGTGACACAAAAATCGAGATCTTAATGGGAATCTTGAATATTTACTCACT
CATCGGCTCACTGGCTGCCGGCAGAACCTCCGACTGGATTGGCCGCCGGT
ACACTATCGTGTTAGCCGGGGCCATCTTCTTCGCCGGAGCGCTGCTCATG
GGGTTCGCCACAAACTACGCTTTCCTCATGGGGGGTCGCTTCGGCGCCGG
TATCGGCGTCGGATACGCTCTCATGATCGCTCCCGTTTACACAGCTGAAC
TTTCTCCGGCTTCTACTCGAGGCTTTCTCACCTCATTTCCTGAGGTTTTC
ATTAACGGCGGGATATTACTTGGCTACGTCTCGAACTACGGATTCTCCAA
ACTACCCCTCCACTTAGGCTGGCGCATGATGCTCGGAATCGGCGCCATTC
CGTCGGTGCTTCTCGCCGTCGGCGTGTTAGCCATGC
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