CB294018
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB294018 vs. ExPASy Swiss-Prot
Match: CYCM_RICPR (Cytochrome c homolog OS=Rickettsia prowazekii GN=cycM PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.490e-16 Identity = 41/98 (41.84%), Postives = 58/98 (59.18%), Query Frame = 2 Query: 113 NAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLK 406 NA G +I K KC CH+++K +K GP+L + GR + Y YS A + W+++ L+ +L P Y PGTKM F G+ KPQD AD+I +LK Sbjct: 73 NANHGREIAK-KCLMCHSLDKDGPNKLGPHLWNIVGRPKASITDYKYSFAISKLGGVWDDENLFAFLHKPSSYAPGTKMSFAGISKPQDIADVILFLK 169
BLAST of CB294018 vs. ExPASy Swiss-Prot
Match: CY552_PARDE (Cytochrome c-552 OS=Paracoccus denitrificans GN=cycM PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.490e-16 Identity = 48/110 (43.64%), Postives = 65/110 (59.09%), Query Frame = 2 Query: 77 TIMASFDEAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLK 406 T++AS D A AGEK+F KC CH ++ G GP+LNG+ GR G++YS K +W + L ++L NPK + GTKM F GL K +DRA+LIAYL+ Sbjct: 73 TVLASADPA------AGEKVFG-KCKACHKLDGNDG--VGPHLNGVVGRTVAGVDGFNYSDPMKAHGGDWTPEALQEFLTNPKAVVKGTKMAFAGLPKIEDRANLIAYLE 173
BLAST of CB294018 vs. ExPASy Swiss-Prot
Match: CYCM_RICCN (Cytochrome c homolog OS=Rickettsia conorii GN=cycM PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.559e-16 Identity = 47/121 (38.84%), Postives = 67/121 (55.37%), Query Frame = 2 Query: 68 QNTTIMASFDEAP--------PGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLK 406 QNTT + ++AP NA G +I K KC CH+++K +K GP+L + GR + Y YS A + W++ +L+ +L P Y PGTKM F G+ KPQD AD+I +LK Sbjct: 53 QNTTAL---EQAPVNIPELMKTANADNGREIAK-KCLMCHSLDKDGPNKLGPHLWDVTGRPKASIADYKYSPALSKLGGVWDDDSLFAFLHKPSSYAPGTKMSFAGISKPQDIADVILFLK 169
BLAST of CB294018 vs. ExPASy Swiss-Prot
Match: CYC22_RHOMO (Cytochrome c2 iso-2 OS=Rhodospirillum molischianum PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.954e-16 Identity = 41/88 (46.59%), Postives = 55/88 (62.50%), Query Frame = 2 Query: 143 TKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLK 406 T C CH+VE G + GP+L G++GR++GT G+ +S + + W+E TL YL +PK IPG KMVF GLK P D +I YLK Sbjct: 8 TLCKACHSVEAGK-NGVGPSLAGVYGRKAGTISGFKFSDPHIKSGLTWDEPTLTKYLADPKTVIPGNKMVFAGLKNPDDVKAVIEYLK 94
BLAST of CB294018 vs. ExPASy Swiss-Prot
Match: CYCM_RICFE (Cytochrome c homolog OS=Rickettsia felis GN=cycM PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.326e-15 Identity = 47/121 (38.84%), Postives = 67/121 (55.37%), Query Frame = 2 Query: 68 QNTTIMASFDEAP--------PGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLK 406 QNTT + ++AP NA G +I K KC CH+++K +K GP+L + GR + Y YS A + W++ +L+ +L P Y PGTKM F G+ KPQD AD+I +LK Sbjct: 53 QNTT---ASEQAPVNIPELMKTANADNGREIAK-KCLVCHSLDKDGPNKLGPHLWDVAGRPKASIADYKYSPALSKLGGVWDDDSLFAFLHKPSSYAPGTKMSFAGISKPQDIADVILFLK 169
BLAST of CB294018 vs. ExPASy Swiss-Prot
Match: CY550_THINO (Cytochrome c-550 (Fragment) OS=Thiobacillus novellus PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.326e-15 Identity = 44/94 (46.81%), Postives = 53/94 (56.38%), Query Frame = 2 Query: 146 KCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVN---WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 418 KC CH V +GA +K GP LNG+ GR+ G+ G++YS K W + L YL NPK Y+PG KMVF GL K DL AYLK A Sbjct: 10 KCMACHAVGEGAKNKVGPELNGIIGRKMGSIEGFNYSDTLKEHNAKGDVWTAEILSQYLANPKGYMPGVKMVFAGLPKEIRADDLEAYLKTFNA 103
BLAST of CB294018 vs. ExPASy Swiss-Prot
Match: CYC2_RHOPH (Cytochrome c2 OS=Rhodospirillum photometricum PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.859e-15 Identity = 48/109 (44.04%), Postives = 61/109 (55.96%), Query Frame = 2 Query: 110 GNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAV---NWEEKTLYDYLLNPKKYI--------PGTKMVFPGLKKPQDRADLIAYL 403 G+A GEKI K KC CH + KG K GP L G+FGR +GT GYSYS M W++ L YLL+PK Y+ +KM+F L+K D A++IAYL Sbjct: 2 GDAAVGEKIAKAKCTACHDLNKGGPIKVGPPLFGVFGRTTGTFAGYSYSPGYTVMGQKGHTWDDNALKAYLLDPKGYVQAKSGDPKANSKMIF-RLEKDDDVANVIAYL 109
BLAST of CB294018 vs. ExPASy Swiss-Prot
Match: CYCM_BRAJA (Cytochrome c homolog OS=Bradyrhizobium japonicum GN=cycM PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.040e-15 Identity = 40/87 (45.98%), Postives = 52/87 (59.77%), Query Frame = 2 Query: 146 KCAQCHTVEKGAGHKQGPNLNGLFGRQSGT-TPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYL 403 KC CHT EKG ++ GPNL G+ G G G+++SAA K W L ++ NPK +IPGT M F G+ K +RAD+IAYL Sbjct: 83 KCGACHTFEKGGPNRVGPNLYGVVGEARGEGRNGFNFSAAMKGKGGTWTFDDLNKFIANPKGFIPGTAMGFAGIPKDSERADVIAYL 169
BLAST of CB294018 vs. ExPASy Swiss-Prot
Match: CYC21_RHOFU (Cytochrome c2 iso-1 OS=Rhodospirillum fulvum PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.572e-14 Identity = 41/89 (46.07%), Postives = 55/89 (61.80%), Query Frame = 2 Query: 146 KCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKM--VFPGLKKPQDRADLIAYLK 406 +C CH++E G + GP+L+G +GR+ G P Y YSAA+ + +E L +YL NPK IPG KM F GLKKP+D +I YLK Sbjct: 9 QCKACHSIEAGK-NGVGPSLSGAYGRKVGLAPNYKYSAAHLASGMTIDEAMLTNYLANPKATIPGNKMGASFGGLKKPEDVKAVIEYLK 96
BLAST of CB294018 vs. ExPASy Swiss-Prot
Match: CYC21_RHOMO (Cytochrome c2 iso-1 OS=Rhodospirillum molischianum PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.612e-13 Identity = 39/89 (43.82%), Postives = 54/89 (60.67%), Query Frame = 2 Query: 146 KCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKM--VFPGLKKPQDRADLIAYLK 406 +C CH+++ G + GP+L+G +GR+ G P Y YS A+ + ++ L YL NPK+ IPG KM F GLK P D A +IAYLK Sbjct: 10 QCKACHSIDAGK-NGVGPSLSGAYGRKVGLAPNYKYSPAHLASGMTIDDAMLTKYLANPKETIPGNKMGAAFGGLKNPADVAAVIAYLK 97 The following BLAST results are available for this feature:
BLAST of CB294018 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
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Sequences
The
following sequences are available for this feature:
EST sequence >CB294018 ID=CB294018; Name=CB294018; organism=Citrus sinensis; type=EST; length=663bpback to top |