CB294021

Overview
NameCB294021
Unique NameCB294021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length324
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 3.520e-16
Identity = 42/106 (39.62%), Postives = 61/106 (57.55%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIGKCNP-IGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            W +TEL R+P ++ K++ E+   +G     I E D+ ++ YL+ V  ETFRLHP  PLLLP    +D +  G+  P    + +N + IGRD +    P  FIPERF
Sbjct:  312 WTLTELSRHPRVMKKLQEEIRAMLGPNKERITEEDLEKVEYLKLVMVETFRLHPPAPLLLPRLTMSDIKIQGYNIPKNTMIQINTYAIGRDPKYWKQPGEFIPERF 417          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 4.597e-16
Identity = 43/105 (40.95%), Postives = 60/105 (57.14%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            WAM  LL++P +L K++ EL   IGK   + ESDI++L YL A+ KET RL+P  P   P +   D    G+    G +++ N W I RD  +  +P  F PERF
Sbjct:  351 WAMCLLLKHPHVLEKLKEELNTYIGKERCVNESDINKLVYLHAIIKETLRLYPPAPFSSPREFTEDCTIGGYHIKKGTRLMPNLWKIHRDPSVWPDPLEFKPERF 455          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.597e-16
Identity = 39/106 (36.79%), Postives = 64/106 (60.38%), Query Frame = -2
Query:    6 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 323
            +W M EL R+P ++ KV+ E+ + +G    +   D+  L Y++ V KET+RLH   P+L+P +A  + +  G+    G ++ VN W IGR+ ++  +P  FIPERF
Sbjct:  317 DWTMAELSRHPRVMKKVQAEIREHVGDKGIVTYDDLEALVYMKMVIKETWRLHAPSPILIPREAMTNFKIKGYDIYPGTRIHVNAWAIGRNPDVWKDPDEFIPERF 422          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 6.005e-16
Identity = 44/105 (41.90%), Postives = 60/105 (57.14%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            WA + +L NP +L K++ EL+  +GK   I ESD+S+L YLQAV KET RL+P  PL  P +   D    G+    G +++ N   I  D  +  NP  F PERF
Sbjct:  329 WATSLILNNPSVLEKLKAELDIQVGKERYICESDLSKLTYLQAVVKETLRLYPPAPLSRPREFEEDCTIGGYTVKKGTRLITNLSKIHTDHNVWSNPLEFKPERF 433          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C7D94_MENGR (Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D94 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.842e-16
Identity = 41/105 (39.05%), Postives = 66/105 (62.86%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            WA++EL+RNP  ++KV+ E+ + +     +  S++  L Y+++V KET RLHP  P L+P ++  + E  GF  P   ++L+N W IGRD    ++P +F PERF
Sbjct:  307 WALSELMRNPAKMAKVQAEVREALKGKTSVDLSEMQELKYMRSVVKETLRLHPPFP-LIPRQSREECEINGFYIPARTRILINAWSIGRDPLYWEDPDTFRPERF 410          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.842e-16
Identity = 42/106 (39.62%), Postives = 60/106 (56.60%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIG-KCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            W MTEL R+P ++ K++ E+   +G     I E D+ ++ YL+ V +E FRLHP  PLLLP    +D    G+  P    + +N + IGRD +    P  FIPERF
Sbjct:  310 WTMTELSRHPRVMRKLQEEIRAALGPNKEKITEEDLEKVEYLKMVIEEAFRLHPPAPLLLPRLTMSDINIQGYSIPKNTMIQINTYTIGRDPKNWTKPDEFIPERF 415          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: THAD_ARATH (Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=CYP705A5 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.024e-15
Identity = 40/106 (37.74%), Postives = 63/106 (59.43%), Query Frame = -2
Query:    6 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 323
            +W M E+++NP I  ++R E++  +GK   + E+D+  LPYLQA+ KE  RLHP  P++   K   + +  GF  P   ++ VN + I RD +  ++P  F PERF
Sbjct:  322 QWTMAEIIKNPKICERLREEIDSVVGKTRLVQETDLPNLPYLQAIVKEGLRLHPPGPVVRTFKETCEIK--GFYIPEKTRLFVNVYAIMRDPDFWEDPEEFKPERF 425          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71AM_ARATH (Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=CYP71A22 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.024e-15
Identity = 42/106 (39.62%), Postives = 62/106 (58.49%), Query Frame = -2
Query:    9 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGEL-RDNPYSFIPER 323
            EWAMTELL  P+ L++++ E+       + + E DI  + YL+AV KET RLHP +PL++P ++  D     +  P G QV++N W IGR+      +   F PER
Sbjct:  302 EWAMTELLHRPECLNRLQEEVRTICKGNSSVSEDDIKDMNYLKAVIKETMRLHPPLPLMVPHESTQDVRLGDYHIPAGTQVMINAWAIGREAATWGPDAEKFRPER 407          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C79F2_ARATH (Hexahomomethionine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79F2 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 1.338e-15
Identity = 41/105 (39.05%), Postives = 65/105 (61.90%), Query Frame = -2
Query:    9 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPER 323
            EW + E+L+NP+IL K   EL++ +GK   + ESDI  L YL+A  +ETFR+HP+   + P  A  D+   G+  P G+ + V   G+GR+ ++  +P ++ PER
Sbjct:  338 EWTLGEMLKNPEILRKALKELDEVVGKDRLVQESDIRNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLAYEPER 442          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.338e-15
Identity = 37/105 (35.24%), Postives = 62/105 (59.05%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            W M EL+RNP++++K + E+   +         D+  L Y+++V KET R+HP +P L+P     + E  G+  PN A++++N W +GR+    + P +F PERF
Sbjct:  312 WVMAELMRNPEVMAKAQAEVRAALKGKTDWDVDDVQELKYMKSVVKETMRMHPPIP-LIPRSCREECEVNGYTIPNKARIMINVWSMGRNPLYWEKPETFWPERF 415          
The following BLAST results are available for this feature:
BLAST of CB294021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
C71BZ_ARATH3.520e-1639.62Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
C82A1_PEA4.597e-1640.95Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G... [more]
C71B6_ARATH4.597e-1636.79Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C82A2_SOYBN6.005e-1641.90Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]
C7D94_MENGR7.842e-1639.05Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D... [more]
C71B5_ARATH7.842e-1639.62Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]
THAD_ARATH1.024e-1537.74Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=C... [more]
C71AM_ARATH1.024e-1539.62Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=C... [more]
C79F2_ARATH1.338e-1539.05Hexahomomethionine N-hydroxylase OS=Arabidopsis th... [more]
C71DD_MENPI1.338e-1535.24Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS01_01aa05_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01aa05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB294021 ID=CB294021; Name=CB294021; organism=Citrus sinensis; type=EST; length=324bp
CCCCAAAACCTCTCTGGAATAAAAGAGTATGGGTTGTCCCTTAATTCACC
ATCCCTTCCTATACCCCATGGGTTGACTAAAACTTGGGCCCCATTTGGCC
CCTTGAACCCGGCACCTTCTGAATCTGCTGGGGCTTTACCGGGAAGTAAA
AGAGGAACTGCCGGGTGCAACCGGAAGGTTTCTTTGAATACTGCTTGTAA
ATAAGGCAAGCGGCTGATGTCTGATTCCCCAATTGGATTGCATTTCCCAA
TCGGTTGTTCCAACTCTAATCGGACTTTTGATAAAATATCTGGGTTGCGA
AGTAGTTCTGTCATTGCCCATTCC
back to top