CB294021

Overview
NameCB294021
Unique NameCB294021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length324
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.338e-15
Identity = 43/105 (40.95%), Postives = 57/105 (54.29%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            WAM E+++NP  + KV+ E+ +   K      S    L YL++V  ET RLHP  PLLLP +     E  G+  P  ++V+VN W IGRD  L      F PERF
Sbjct:  309 WAMAEMIKNPRTMEKVQTEVRRVFDKEGRPNGSGTENLKYLKSVVSETLRLHPPAPLLLPRECGQACEINGYHIPAKSRVIVNAWAIGRDPRLWTEAERFYPERF 413          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C78A1_MAIZE (Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.747e-15
Identity = 45/108 (41.67%), Postives = 63/108 (58.33%), Query Frame = -2
Query:    6 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGK-APADSEGA-GFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 323
            EW M EL+R+P + ++VR E++  +G      ++D++R+PYLQAV KET R HP  PLL   + A AD     G   P G   +VN W I  D  +  +P +F PERF
Sbjct:  355 EWCMAELVRHPAVQARVRAEVDAAVGAGGCPTDADVARMPYLQAVVKETLRAHPPGPLLSWARLATADVPLCNGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERF 462          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 2.282e-15
Identity = 40/107 (37.38%), Postives = 63/107 (58.88%), Query Frame = -2
Query:    6 EWAMTELLRNPDILSKVRLELEQPIGKCNPIG-ESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 323
            EW M+EL+RNP++++KV+ E+ +     +P   E  I  L Y++ V KET RL+P +PLL+P       +  G++   G +V++N W + R  E  D+   F PERF
Sbjct:  338 EWVMSELMRNPEVMAKVQAEVRRVFDNKSPQDHEGLIDNLRYMKMVIKETMRLNPVLPLLMPHLCRETCDIGGYEVVEGTRVVINSWAMARSPEYWDDAEEFKPERF 444          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.282e-15
Identity = 41/107 (38.32%), Postives = 59/107 (55.14%), Query Frame = -2
Query:    6 EWAMTELLRNPDILSKVRLELEQPI-GKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 323
            EW M+EL+R P+ ++K + E+   + GK     E  + +L Y + V KE  RLHP +PLLLP       +  GF+   G +V+VN W + R  E   +P  F PERF
Sbjct:  316 EWIMSELMRKPEAMAKAQAEVRGALDGKSPEDHEGQMDKLSYTRMVVKEGLRLHPVLPLLLPRSCQETCDVGGFEVTKGTKVIVNAWALARSPERWHDPEEFRPERF 422          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 2.282e-15
Identity = 42/108 (38.89%), Postives = 61/108 (56.48%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIGKCNP--IGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRD-GELRDNPYSFIPERF 320
            W MT L++ P +L K + E+ + + +     + E D+  LPY +A+ KET R+ P +PLL+P     D++ AG+  P G  V VN W + RD  E   NP  F PERF
Sbjct:  311 WGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERF 418          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.282e-15
Identity = 42/106 (39.62%), Postives = 62/106 (58.49%), Query Frame = -2
Query:    6 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 323
            EWAM+E+++NP +  K + EL Q       I E+D+  L YL++V KET RLHP    L+P +    +   G++ P   +V++N W IGRD +   +   FIPERF
Sbjct:  316 EWAMSEMMKNPKVKEKAQAELRQIFKGKEIIRETDLEELSYLKSVIKETLRLHPP-SQLIPRECIISTNIDGYEIPIKTKVMINTWAIGRDPQYWSDADRFIPERF 420          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C78A3_SOYBN (Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.892e-15
Identity = 41/107 (38.32%), Postives = 59/107 (55.14%), Query Frame = -2
Query:    6 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPA-DSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 323
            EW +  +  +P + SKV+ EL+  +GK   + E D++ + YL AV KE  RLHP  PLL   +    D+   G+  P G   +VN W I RD  +  +P  F+PERF
Sbjct:  333 EWILARMALHPHVQSKVQEELDAVVGKARAVAEDDVAVMTYLPAVVKEVLRLHPPGPLLSWARLSINDTTIDGYHVPAGTTAMVNTWAICRDPHVWKDPLEFMPERF 439          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.892e-15
Identity = 42/107 (39.25%), Postives = 62/107 (57.94%), Query Frame = -2
Query:    9 EWAMTELLRNPDILSKVRLELEQPIGKCNP-IGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGEL-RDNPYSFIPER 323
            EW MTEL+RNP+++ K++ E+   I      I E D+  + YL+AV KE FR+HP +PL+LP     D +  G+    G +V++N W I RD  +   +   F PER
Sbjct:  308 EWIMTELIRNPNVMKKLQDEIRSTIRPHGSYIKEKDVENMKYLKAVIKEVFRVHPPLPLILPRLLSEDVKVKGYNIAAGTEVIINAWAIQRDPAIWGPDAEEFKPER 414          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.083e-15
Identity = 44/108 (40.74%), Postives = 65/108 (60.19%), Query Frame = -2
Query:    6 EWAMTELLRNPDILSKVRLELEQ--PIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 323
            E+AMTEL+R P ++ K++ E+ +  P G+   + E ++  +  L+AV KET RLHP VPLLLP  +    E AG+  P   +V+VN W +GR     +    F+PERF
Sbjct:  347 EFAMTELIRKPHLMKKLQEEVRRNVPAGQ-EMVTEDNLPGMTDLKAVIKETLRLHPPVPLLLPHYSLDACEVAGYTIPANTRVVVNAWALGRHSGYWERENEFVPERF 453          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.083e-15
Identity = 38/91 (41.76%), Postives = 55/91 (60.44%), Query Frame = -2
Query:   51 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRD 323
            EWAMTELLR+P  L +++ E+       + + E +I  + YL+AV KE  RLHP +PL++P ++  D        P G QVL+N W IGR+
Sbjct:  301 EWAMTELLRHPKCLKRLQEEVRTICKDKSSVSEEEIQNMSYLKAVIKEALRLHPPLPLMVPHESTQDVRLGDHHIPAGTQVLINAWAIGRE 391          
The following BLAST results are available for this feature:
BLAST of CB294021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
C71D9_SOYBN1.338e-1540.95Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]
C78A1_MAIZE1.747e-1541.67Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 S... [more]
C99A2_ORYSJ2.282e-1537.38Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]
C99A1_SORBI2.282e-1538.32Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C83A1_ARATH2.282e-1538.89Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C71D8_SOYBN2.282e-1539.62Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C78A3_SOYBN3.892e-1538.32Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=... [more]
C71AC_ARATH3.892e-1539.25Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]
C71C4_MAIZE5.083e-1540.74Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C71AQ_ARATH5.083e-1541.76Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01aa05_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01aa05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB294021 ID=CB294021; Name=CB294021; organism=Citrus sinensis; type=EST; length=324bp
CCCCAAAACCTCTCTGGAATAAAAGAGTATGGGTTGTCCCTTAATTCACC
ATCCCTTCCTATACCCCATGGGTTGACTAAAACTTGGGCCCCATTTGGCC
CCTTGAACCCGGCACCTTCTGAATCTGCTGGGGCTTTACCGGGAAGTAAA
AGAGGAACTGCCGGGTGCAACCGGAAGGTTTCTTTGAATACTGCTTGTAA
ATAAGGCAAGCGGCTGATGTCTGATTCCCCAATTGGATTGCATTTCCCAA
TCGGTTGTTCCAACTCTAATCGGACTTTTGATAAAATATCTGGGTTGCGA
AGTAGTTCTGTCATTGCCCATTCC
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