CB294021

Overview
NameCB294021
Unique NameCB294021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length324
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 6.639e-15
Identity = 39/91 (42.86%), Postives = 54/91 (59.34%), Query Frame = -2
Query:   51 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRD 323
            EWAMTEL+RNP ++ K++ E+     +   + E +  ++ YLQAV KE  RL P  PLL+P     D +  G+  P G QV+VN W I RD
Sbjct:  310 EWAMTELMRNPKVMKKLQEEIRSSSPQDLFVTEKEAEKMNYLQAVIKEALRLRPPAPLLVPRVLSEDVKLKGYNIPAGTQVIVNAWAIQRD 400          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: CP1A1_CANFA (Cytochrome P450 1A1 OS=Canis familiaris GN=CYP1A1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.670e-15
Identity = 41/105 (39.05%), Postives = 57/105 (54.29%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            W++  L+ NP++  K++ EL+  IG+      SD  +LPY++A   ETFR    VP  +P     D+  +GF  P G  V VN W I  D +L  NP  F PERF
Sbjct:  332 WSLLYLVTNPNVQKKIQKELDTVIGRARQPRLSDRPQLPYMEAFILETFRHASFVPFTIPHSTTRDTSLSGFYIPKGRCVFVNQWQINHDQKLWGNPSEFQPERF 436          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: CP1A1_MACMU (Cytochrome P450 1A1 OS=Macaca mulatta GN=CYP1A1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.132e-14
Identity = 42/105 (40.00%), Postives = 56/105 (53.33%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            W++  L+ NP +  K++ EL+  IG+      SD S LPY++A   ETFR    VP  +P     D+   GF  P G  V VN W I  D +L  NP  F+PERF
Sbjct:  328 WSLMYLVTNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERF 432          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: CP1A1_MACFA (Cytochrome P450 1A1 OS=Macaca fascicularis GN=CYP1A1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.132e-14
Identity = 42/105 (40.00%), Postives = 56/105 (53.33%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            W++  L+ NP +  K++ EL+  IG+      SD S LPY++A   ETFR    VP  +P     D+   GF  P G  V VN W I  D +L  NP  F+PERF
Sbjct:  328 WSLMYLVTNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERF 432          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: CP1A1_HUMAN (Cytochrome P450 1A1 OS=Homo sapiens GN=CYP1A1 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.132e-14
Identity = 42/105 (40.00%), Postives = 56/105 (53.33%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            W++  L+ NP +  K++ EL+  IG+      SD S LPY++A   ETFR    VP  +P     D+   GF  P G  V VN W I  D +L  NP  F+PERF
Sbjct:  328 WSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERF 432          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.479e-14
Identity = 43/106 (40.57%), Postives = 60/106 (56.60%), Query Frame = -2
Query:    9 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGEL-RDNPYSFIPER 323
            +WAMTELLR+P+ L  ++ E+         + E DI  + YL+AV KET RLHP +PLL P ++  D     +  P G QV++N W IGR+      +   F PER
Sbjct:  302 DWAMTELLRHPECLRTLQEEVRTICKGNLSVSEEDIQNMSYLKAVIKETTRLHPPLPLLAPHESIQDVILGDYHIPAGTQVMINAWAIGREAATWGPDAEKFRPER 407          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71A9_SOYBN (Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.479e-14
Identity = 40/105 (38.10%), Postives = 60/105 (57.14%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            W M+EL+RNP  + + + E+   +     + E D+S+L Y+++V KE  RLHP  PLL+P +   +    GF+ P   +VLVN   I  D    +NP  F+PERF
Sbjct:  312 WIMSELIRNPKAMKRAQEEVRDLVTGKEMVEEIDLSKLLYIKSVVKEVLRLHPPAPLLVPREITENCTIKGFEIPAKTRVLVNAKSIAMDPCCWENPNEFLPERF 416          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.932e-14
Identity = 43/106 (40.57%), Postives = 59/106 (55.66%), Query Frame = -2
Query:    9 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGEL-RDNPYSFIPER 323
            EW MTELLR+P  L K++ E+       + + E DI  + YL+AV KE  RLHP VPL++P ++  D        P G QV+VN W +GR+      +   F PER
Sbjct:  299 EWEMTELLRHPTCLKKLQEEVRTICKGKSSVSEDDIQGMEYLKAVVKEALRLHPPVPLMVPHQSTQDVRLRDNHIPAGTQVIVNLWAVGREAATWGPDANEFRPER 404          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 1.932e-14
Identity = 42/107 (39.25%), Postives = 61/107 (57.01%), Query Frame = -2
Query:    9 EWAMTELLRNPDILSKVRLELEQPIGKCNP-IGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGEL-RDNPYSFIPER 323
            EW MTEL+RNP+ + K++ E+   I      I E ++  + YL+AV KE FR+HP +PL+LP     D +  G+    G +VL+N W I RD  +   +   F PER
Sbjct:  308 EWIMTELIRNPECMKKLQNEIRSTIRPHGSYIKEKEVENMRYLKAVIKEVFRVHPPLPLILPRLLTEDVKVKGYDIAAGTEVLINAWSIHRDPAIWGPDAEEFKPER 414          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.523e-14
Identity = 37/91 (40.66%), Postives = 56/91 (61.54%), Query Frame = -2
Query:   51 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRD 323
            EWAMTELLR+P  L++++ E+       + + E DI  + YL+AV KE  RLHP  P++ P ++  D +   +  P G QV++N W IGR+
Sbjct:  301 EWAMTELLRHPKSLNRLQEEVRTICKGKSRVSEDDIQGMKYLKAVIKEALRLHPPFPMMAPHESTEDVKLRDYHIPAGTQVMMNAWAIGRE 391          
The following BLAST results are available for this feature:
BLAST of CB294021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
C71AK_ARATH6.639e-1542.86Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
CP1A1_CANFA8.670e-1539.05Cytochrome P450 1A1 OS=Canis familiaris GN=CYP1A1 ... [more]
CP1A1_MACMU1.132e-1440.00Cytochrome P450 1A1 OS=Macaca mulatta GN=CYP1A1 PE... [more]
CP1A1_MACFA1.132e-1440.00Cytochrome P450 1A1 OS=Macaca fascicularis GN=CYP1... [more]
CP1A1_HUMAN1.132e-1440.00Cytochrome P450 1A1 OS=Homo sapiens GN=CYP1A1 PE=1... [more]
C71AL_ARATH1.479e-1440.57Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]
C71A9_SOYBN1.479e-1438.10Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=... [more]
C71AN_ARATH1.932e-1440.57Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C71AI_ARATH1.932e-1439.25Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C71AP_ARATH2.523e-1440.66Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01aa05_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01aa05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB294021 ID=CB294021; Name=CB294021; organism=Citrus sinensis; type=EST; length=324bp
CCCCAAAACCTCTCTGGAATAAAAGAGTATGGGTTGTCCCTTAATTCACC
ATCCCTTCCTATACCCCATGGGTTGACTAAAACTTGGGCCCCATTTGGCC
CCTTGAACCCGGCACCTTCTGAATCTGCTGGGGCTTTACCGGGAAGTAAA
AGAGGAACTGCCGGGTGCAACCGGAAGGTTTCTTTGAATACTGCTTGTAA
ATAAGGCAAGCGGCTGATGTCTGATTCCCCAATTGGATTGCATTTCCCAA
TCGGTTGTTCCAACTCTAATCGGACTTTTGATAAAATATCTGGGTTGCGA
AGTAGTTCTGTCATTGCCCATTCC
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