CB294021

Overview
NameCB294021
Unique NameCB294021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length324
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 9.586e-14
Identity = 39/106 (36.79%), Postives = 61/106 (57.55%), Query Frame = -2
Query:    9 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGEL-RDNPYSFIPER 323
            EWAMTELL + + L +++ E+       + + E D+  + YL+AV KET RLHP +PL++P ++  D +   +  P G  V++N W IGR+      +   F PER
Sbjct:  303 EWAMTELLCHHECLDRLQEEVRMVCKDKSGVSEDDLQDMKYLKAVIKETLRLHPPLPLMVPHESTHDVKLRDYHIPAGTHVMINAWAIGREAATWGPDAEEFRPER 408          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.635e-13
Identity = 38/92 (41.30%), Postives = 55/92 (59.78%), Query Frame = -2
Query:   51 EWAMTELLRNPDILSKVRLELEQPIGKCNP-IGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRD 323
            EW MTEL+R+P+ + K++ E+     K    I E D+  + YL+AV KE  RLHP +PLL+P +   D +  G+    G QV++N W I RD
Sbjct:  309 EWIMTELIRHPECMKKLQDEIRAKATKLILYISEEDVEDMKYLKAVVKEVLRLHPPLPLLVPRELSEDIKLKGYDIAAGTQVIINAWAIQRD 400          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: CP1A1_RAT (Cytochrome P450 1A1 OS=Rattus norvegicus GN=Cyp1a1 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.136e-13
Identity = 42/105 (40.00%), Postives = 55/105 (52.38%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            W++  L+ NP I  K++ EL+  IG+      SD  +LPYL+A   ETFR    VP  +P     D+   GF  P G  V VN W +  D EL  +P  F PERF
Sbjct:  332 WSLMYLVTNPRIQRKIQEELDTVIGRDRQPRLSDRPQLPYLEAFILETFRHSSFVPFTIPHSTIRDTSLNGFYIPKGHCVFVNQWQVNHDQELWGDPNEFRPERF 436          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: CP17A_PANTR (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Pan troglodytes GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.136e-13
Identity = 38/106 (35.85%), Postives = 56/106 (52.83%), Query Frame = -2
Query:    6 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 323
            +W +  LL NP +  K+  E++Q +G       SD +RL  L+A  +E  RL P  P+L+P KA  DS    F    G QV++N W +  + +    P  F+PERF
Sbjct:  312 KWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTQVIINLWALHHNEKEWHQPDQFMPERF 417          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.136e-13
Identity = 40/107 (37.38%), Postives = 59/107 (55.14%), Query Frame = -2
Query:    6 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKG-PNGAQVLVNPWGIGRDGELRDNPYSFIPERF 323
            +W M ++LR P  +  ++ E+       + I E D+  + YL+AV KE+ RLHP   LL+P ++  D +  G+   P   Q L+N W IGRD    +NP  F PERF
Sbjct:  318 DWTMADVLRQPRAMKTLQNEVRGLAQGKSEITEDDLKNMQYLRAVIKESLRLHPPNSLLVPRESMEDVKLLGYYHIPARTQALINVWAIGRDPLSWENPEEFCPERF 424          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: CP1A2_BALAC (Cytochrome P450 1A2 OS=Balaenoptera acutorostrata GN=CYP1A2 PE=2 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 2.789e-13
Identity = 40/105 (38.10%), Postives = 56/105 (53.33%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            W++  L+ NP+I  K++ EL+  IG+      SD S+LPYL+A   ETFR    VP  +P     D+   GF  P    V +N W +  D +L  +P  F PERF
Sbjct:  328 WSLLYLVTNPEIQRKIQQELDTVIGRARRPRLSDRSQLPYLEAFILETFRHSSFVPFTIPHSTIRDTTLNGFYIPKELCVFINQWQVNHDPKLWGDPSEFRPERF 432          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: CP17A_MOUSE (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mus musculus GN=Cyp17a1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.789e-13
Identity = 36/105 (34.29%), Postives = 55/105 (52.38%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            W +  L+ NP++  K++ E++Q +G       +D + L  L+A  +E  R+ P  PLL+P KA  DS    F  P    V++N W +  D    D P  F+PERF
Sbjct:  312 WILAFLVHNPEVKRKIQKEIDQYVGFSRTPSFNDRTHLLMLEATIREVLRIRPVAPLLIPHKANIDSSIGEFAIPKDTHVIINLWALHHDKNEWDQPDRFMPERF 416          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: CP1A1_SHEEP (Cytochrome P450 1A1 OS=Ovis aries GN=CYP1A1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.643e-13
Identity = 40/105 (38.10%), Postives = 56/105 (53.33%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            W++  L+ +P +  K++ EL+  IG+      SD  +LPYL+A   ETFR    VP  +P     D+   GF  P G  V VN W I  D +L ++P  F PERF
Sbjct:  335 WSLLYLVTSPRVQKKIQEELDTVIGRARWPQLSDRPQLPYLEAFILETFRHSSFVPFTIPHSTTRDTNLNGFYIPKGXCVFVNQWQINHDQKLWEDPSEFRPERF 439          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: CP1A1_MESAU (Cytochrome P450 1A1 OS=Mesocricetus auratus GN=CYP1A1 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 3.643e-13
Identity = 40/105 (38.10%), Postives = 55/105 (52.38%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            W++  L+ NP +  K++ EL+  IG+       D S+LPYL+A   ETFR    +P  +P     D+   GF  P G  V VN W I  + EL  +P  F PERF
Sbjct:  332 WSLMYLVTNPGVQRKIQEELDTVIGRSRRPRLCDRSQLPYLEAFILETFRHSSFLPFTIPHSTTRDTSLCGFYIPKGHCVFVNQWQINHNQELWGDPNKFRPERF 436          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: CP17A_ORYLA (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Oryzias latipes GN=cyp17a1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.643e-13
Identity = 36/106 (33.96%), Postives = 59/106 (55.66%), Query Frame = -2
Query:    6 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 323
            +WA+T L+  P++  +++ EL++ +G   P   SD   LP+L+A  +E  R+ P  PLL+P  A +D+    F    G +V++N W +  D +   NP  F P RF
Sbjct:  321 KWAITYLIHYPEVQKQIQEELDRKVGVDRPPQLSDRGSLPFLEATIREVLRIRPVAPLLIPHVALSDTSLGDFTVRKGTRVVINLWSLHHDEKEWTNPDLFNPGRF 426          
The following BLAST results are available for this feature:
BLAST of CB294021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
C71AO_ARATH9.586e-1436.79Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
C71AE_ARATH1.635e-1341.30Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]
CP1A1_RAT2.136e-1340.00Cytochrome P450 1A1 OS=Rattus norvegicus GN=Cyp1a1... [more]
CP17A_PANTR2.136e-1335.85Steroid 17-alpha-hydroxylase/17,20 lyase OS=Pan tr... [more]
C71A4_SOLME2.136e-1337.38Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
CP1A2_BALAC2.789e-1338.10Cytochrome P450 1A2 OS=Balaenoptera acutorostrata ... [more]
CP17A_MOUSE2.789e-1334.29Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mus mu... [more]
CP1A1_SHEEP3.643e-1338.10Cytochrome P450 1A1 OS=Ovis aries GN=CYP1A1 PE=2 S... [more]
CP1A1_MESAU3.643e-1338.10Cytochrome P450 1A1 OS=Mesocricetus auratus GN=CYP... [more]
CP17A_ORYLA3.643e-1333.96Steroid 17-alpha-hydroxylase/17,20 lyase OS=Oryzia... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01aa05_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01aa05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB294021 ID=CB294021; Name=CB294021; organism=Citrus sinensis; type=EST; length=324bp
CCCCAAAACCTCTCTGGAATAAAAGAGTATGGGTTGTCCCTTAATTCACC
ATCCCTTCCTATACCCCATGGGTTGACTAAAACTTGGGCCCCATTTGGCC
CCTTGAACCCGGCACCTTCTGAATCTGCTGGGGCTTTACCGGGAAGTAAA
AGAGGAACTGCCGGGTGCAACCGGAAGGTTTCTTTGAATACTGCTTGTAA
ATAAGGCAAGCGGCTGATGTCTGATTCCCCAATTGGATTGCATTTCCCAA
TCGGTTGTTCCAACTCTAATCGGACTTTTGATAAAATATCTGGGTTGCGA
AGTAGTTCTGTCATTGCCCATTCC
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