CB294021

Overview
NameCB294021
Unique NameCB294021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length324
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71BV_ARATH (Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.880e-18
Identity = 45/105 (42.86%), Postives = 63/105 (60.00%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            WAM EL +NP ++ KV+ E+   I     I   D  +L YL+ V KET+RLHP  PLL+P +A ++ E  G+  P   ++ VN W IGRD +   +P  F+PERF
Sbjct:  312 WAMAELAKNPRVMKKVQSEIRSQIKNKERISFDDTDKLEYLKMVIKETWRLHPTTPLLIPREAMSEFEINGYTIPVKTRLHVNVWAIGRDPDTWKDPEVFLPERF 416          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.880e-18
Identity = 46/106 (43.40%), Postives = 67/106 (63.21%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIG-KCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            WAMTEL+RNP ++ KV+ E+   +G K   I E D+++L Y + + KE FRLHPA PLLLP +  +  +  G+  P   Q+++N + I RD +L  NP  F P+RF
Sbjct:  311 WAMTELIRNPRVMKKVQDEIRTTLGDKKERITEEDLNQLHYFKLMVKEIFRLHPAAPLLLPRETLSHVKIQGYDIPAKTQIMINAYAIARDPKLWTNPDEFNPDRF 416          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.880e-18
Identity = 44/106 (41.51%), Postives = 65/106 (61.32%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIG-KCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            WAMTEL R+P ++ K++ E+ + +G     I E D+ ++ YL+ V +ETFRLHP  PLLLP +  +D +  G+  P    + +N + IGRD    +NP  F PERF
Sbjct:  312 WAMTELARHPRVMKKLQQEIREILGDNKEKITEQDLEKVHYLKLVIEETFRLHPPAPLLLPRETMSDLKIQGYNIPKNTMIEINTYSIGRDPNCWENPNDFNPERF 417          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71BC_ARATH (Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=CYP71B12 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.880e-18
Identity = 46/105 (43.81%), Postives = 64/105 (60.95%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            W MT L+ NP +L K + E+ + I   + I E DI RL YL+ V KETFR++P VPLL+P +A  D +  G+  P    + VN W I R+  +  +P +FIPERF
Sbjct:  308 WVMTYLISNPRVLKKAQAEVREVIKHKDDIIEEDIERLQYLKMVIKETFRINPLVPLLIPREASKDVKIGGYNIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERF 412          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 3.761e-18
Identity = 45/106 (42.45%), Postives = 63/106 (59.43%), Query Frame = -2
Query:    6 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 323
            EW+M+ LL +P++L KV+ EL+  +G+   + ESD+ +L YL+ V  ET RL+   PLLLP     +    G+K P    VL+N W I RD EL     +F PERF
Sbjct:  312 EWSMSNLLNHPEVLKKVKDELDTHVGQDRLVDESDLPKLTYLKNVINETLRLYTPAPLLLPHSTSDECNIGGYKVPQDTIVLINAWAIHRDPELWTEATTFKPERF 417          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.761e-18
Identity = 46/106 (43.40%), Postives = 63/106 (59.43%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIGKCNP-IGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            W MTEL R+P ++ K++ E+   +G     I E D+ ++ YL  V KE+FRLHP  PLLLP +  +D E  G+  P  A V +N + IGRD +   NP  F PERF
Sbjct:  312 WTMTELTRHPRVMKKLQEEIRATLGPNKERITEEDLEKVEYLNLVIKESFRLHPPAPLLLPRETMSDIEIQGYHIPKNAHVKINTYAIGRDPKRWTNPEEFNPERF 417          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.912e-18
Identity = 47/108 (43.52%), Postives = 65/108 (60.19%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIGKCNP---IGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            WAM EL+RNP ++ KV+ E+   IGK N    I   +I+ L YL  V KET RLHP  PLL+P +  ++ +  G+      ++ VN W IGRD E+  +P  F+PERF
Sbjct:  312 WAMAELIRNPRVMKKVQSEIRAQIGKNNKTRIISLDEINHLSYLNMVIKETCRLHPVAPLLVPREVISEFKINGYTIQPKTRLHVNVWAIGRDPEIWKDPEEFLPERF 419          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71B9_ARATH (Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CYP71B9 PE=2 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 4.912e-18
Identity = 47/105 (44.76%), Postives = 63/105 (60.00%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            WAM EL+RNP ++ KV+ E+   +   + I   DI  LPYL+ V KET+RLHP VPLLLP +  ++ E  G+K      + VN W IGRD +   +   F PERF
Sbjct:  312 WAMAELIRNPRVMKKVQSEIRNQMINKSVITLDDIDHLPYLKMVIKETWRLHPPVPLLLPREVMSEFEINGYKIQPKTLLYVNVWAIGRDPDSWKDADMFYPERF 416          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.415e-18
Identity = 45/106 (42.45%), Postives = 66/106 (62.26%), Query Frame = -2
Query:    6 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 323
            EW + EL+ +PDI  K+R E+++ +G  + I E D  +LPYLQAV KET RL  A+PLL+P     D++ AG+  P  +++LVN W +  +     +P  F PERF
Sbjct:  316 EWGIAELVNHPDIQKKLRAEIDRVLGPDHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLNDAKLAGYDIPAESKILVNAWWLANNPAHWKDPQVFRPERF 421          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71BF_ARATH (Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=CYP71B15 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.415e-18
Identity = 46/106 (43.40%), Postives = 66/106 (62.26%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIG-KCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            W MTEL+RNP ++ KV+ E+   +G K   I E D+++L Y + V KET RLHP  PLLLP +  +  +  G+  P   Q+LVN + +GRD +L +N   F P+RF
Sbjct:  311 WGMTELIRNPRVMKKVQDEIRTTLGDKKERIKEEDLNQLHYFKLVVKETLRLHPTTPLLLPRQTMSHIKIQGYDVPAKTQILVNVYAMGRDPKLWENADEFNPDRF 416          
The following BLAST results are available for this feature:
BLAST of CB294021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
C71BV_ARATH2.880e-1842.86Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=C... [more]
C71BS_ARATH2.880e-1843.40Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C71BM_ARATH2.880e-1841.51Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]
C71BC_ARATH2.880e-1843.81Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=C... [more]
C81E1_GLYEC3.761e-1842.45Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata ... [more]
C71BU_ARATH3.761e-1843.40Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]
C71BA_ARATH4.912e-1843.52Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]
C71B9_ARATH4.912e-1844.76Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CY... [more]
TCMO_RUTGR6.415e-1842.45Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
C71BF_ARATH6.415e-1843.40Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=C... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS01_01aa05_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01aa05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB294021 ID=CB294021; Name=CB294021; organism=Citrus sinensis; type=EST; length=324bp
CCCCAAAACCTCTCTGGAATAAAAGAGTATGGGTTGTCCCTTAATTCACC
ATCCCTTCCTATACCCCATGGGTTGACTAAAACTTGGGCCCCATTTGGCC
CCTTGAACCCGGCACCTTCTGAATCTGCTGGGGCTTTACCGGGAAGTAAA
AGAGGAACTGCCGGGTGCAACCGGAAGGTTTCTTTGAATACTGCTTGTAA
ATAAGGCAAGCGGCTGATGTCTGATTCCCCAATTGGATTGCATTTCCCAA
TCGGTTGTTCCAACTCTAATCGGACTTTTGATAAAATATCTGGGTTGCGA
AGTAGTTCTGTCATTGCCCATTCC
back to top