CB294021

Overview
NameCB294021
Unique NameCB294021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length324
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.379e-18
Identity = 47/106 (44.34%), Postives = 67/106 (63.21%), Query Frame = -2
Query:    6 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 323
            EWA+TELLR+P+ L +V+ EL + +G    + ESDI +L YL+   KET R+HP +PLLL   A  D+   GF  P  ++V++N + IGRD     +P +F P RF
Sbjct:  329 EWALTELLRSPEDLKRVQQELAEVVGLDRRVEESDIEKLTYLKCTLKETLRMHPPIPLLLHETA-EDTSIDGFFIPKKSRVMINAFAIGRDPTSWTDPDTFRPSRF 433          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71BQ_ARATH (Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=CYP71B26 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.379e-18
Identity = 45/105 (42.86%), Postives = 60/105 (57.14%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            WAM EL +NP ++ KV+ E+   I     I   D  +L YL+ V KET+RLHP  PLLLP     + E  G+  P   ++ VN W IGRD +   +P  F+PERF
Sbjct:  312 WAMAELAKNPRVMKKVQAEIRNQIKNKERISFDDTDKLEYLKMVIKETWRLHPPTPLLLPRDVITEFEINGYTIPAKTRLHVNVWAIGRDPDTWKDPEMFLPERF 416          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.379e-18
Identity = 45/106 (42.45%), Postives = 63/106 (59.43%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIGKCNP-IGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            W MTEL R+P ++ K+R E+   +G     I E D+ ++ YL+ V KETFRLHP  P LLP +  +D E  G+  P  A + ++ + IGRD +   NP  F PERF
Sbjct:  314 WTMTELTRHPRVMKKLREEIRATLGPNKERITEEDLEKVEYLKLVIKETFRLHPPGPFLLPRQVMSDIEIQGYHIPKNAHIKISTYAIGRDPKCWTNPEEFNPERF 419          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: TCMO_ARATH (Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana GN=CYP73A5 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.094e-17
Identity = 45/107 (42.06%), Postives = 66/107 (61.68%), Query Frame = -2
Query:    3 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERFW 323
            EW + EL+ +P+I SK+R EL+  +G    + E D+ +LPYLQAV KET RL  A+PLL+P     D++ AG+  P  +++LVN W +  +      P  F PERF+
Sbjct:  316 EWGIAELVNHPEIQSKLRNELDTVLGPGVQVTEPDLHKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLAGYDIPAESKILVNAWWLANNPNSWKKPEEFRPERFF 422          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.429e-17
Identity = 45/106 (42.45%), Postives = 64/106 (60.38%), Query Frame = -2
Query:    6 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 323
            EW + EL+ +P+I +K+R EL+  +G    I E D+  LPYLQAV KET RL  A+PLL+P     D++  GF  P  +++LVN W +  + +    P  F PERF
Sbjct:  316 EWGIAELVNHPEIQAKLRHELDTKLGPGVQITEPDVQNLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPDQWKKPEEFRPERF 421          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.429e-17
Identity = 45/106 (42.45%), Postives = 62/106 (58.49%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRD-GELRDNPYSFIPERF 320
            WAMT L++ P+ + K + E+   IG    + E DI  LPYL+AV KE+ RL P +P+LL  +  AD++  G+  P    + VN W + RD     DNP  FIPERF
Sbjct:  310 WAMTYLIKYPEAMKKAQDEVRSVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERF 415          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.429e-17
Identity = 46/106 (43.40%), Postives = 66/106 (62.26%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIG-KCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            WAM EL+RNP ++ KV+ E+   +G K   I E D+S++ Y + V KE FRLHPA PLLLP +  +  +  G+  P   Q+++N + I RD +L  NP  F P+RF
Sbjct:  317 WAMAELIRNPRVMKKVQDEIRTTLGDKKQRITEQDLSQVHYFKLVVKEIFRLHPAAPLLLPRETMSHVKIQGYDIPVKTQMMINIYSIARDPKLWTNPDEFNPDRF 422          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 1.429e-17
Identity = 43/106 (40.57%), Postives = 65/106 (61.32%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIG-KCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            WAMTEL+RNP ++ K +  +   +G K   I E D+ ++ YL  + KETFRLHPA+P ++P +  +  +  G+  P   Q+ +N W IGRD +  ++P  F PERF
Sbjct:  315 WAMTELIRNPRVMKKAQESIRTTLGLKKERITEEDLGKVEYLNHILKETFRLHPALPFVVPRETMSHIKIQGYDIPPKTQIQLNVWTIGRDPKRWNDPEEFNPERF 420          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.867e-17
Identity = 44/107 (41.12%), Postives = 66/107 (61.68%), Query Frame = -2
Query:    3 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERFW 323
            EW + EL+ +P+I  KVR E+++ +G  + + E DI +LPYLQAV KET RL  A+PLL+P     D++  G+  P  +++LVN W +  +      P  F PERF+
Sbjct:  316 EWGIAELVNHPEIQQKVRDEIDRVLGVGHQVTEPDIQKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPAHWKKPEEFRPERFF 422          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 1.867e-17
Identity = 43/106 (40.57%), Postives = 66/106 (62.26%), Query Frame = -2
Query:    6 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 323
            EW + EL+ + +I +K+R E+++ +G  + + E D+ +LPYLQAV KET RL  A+PLL+P     D++  GF  P  +++LVN W +  +  L   P  F PERF
Sbjct:  316 EWGIAELVNHQEIQNKLREEMDKVLGPGHQVTEPDLEKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPALWKKPEEFRPERF 421          
The following BLAST results are available for this feature:
BLAST of CB294021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
C84A1_ARATH8.379e-1844.34Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C71BQ_ARATH8.379e-1842.86Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=C... [more]
C71B8_ARATH8.379e-1842.45Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]
TCMO_ARATH1.094e-1742.06Trans-cinnamate 4-monooxygenase OS=Arabidopsis tha... [more]
TCMO_HELTU1.429e-1742.45Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
C83B1_ARATH1.429e-1742.45Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C71B7_ARATH1.429e-1743.40Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]
C71B2_ARATH1.429e-1740.57Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]
TCMO_PHAAU1.867e-1741.12Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]
TCMO_PEA1.867e-1740.57Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01aa05_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01aa05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB294021 ID=CB294021; Name=CB294021; organism=Citrus sinensis; type=EST; length=324bp
CCCCAAAACCTCTCTGGAATAAAAGAGTATGGGTTGTCCCTTAATTCACC
ATCCCTTCCTATACCCCATGGGTTGACTAAAACTTGGGCCCCATTTGGCC
CCTTGAACCCGGCACCTTCTGAATCTGCTGGGGCTTTACCGGGAAGTAAA
AGAGGAACTGCCGGGTGCAACCGGAAGGTTTCTTTGAATACTGCTTGTAA
ATAAGGCAAGCGGCTGATGTCTGATTCCCCAATTGGATTGCATTTCCCAA
TCGGTTGTTCCAACTCTAATCGGACTTTTGATAAAATATCTGGGTTGCGA
AGTAGTTCTGTCATTGCCCATTCC
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