CB294021

Overview
NameCB294021
Unique NameCB294021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length324
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.158e-17
Identity = 42/105 (40.00%), Postives = 63/105 (60.00%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            WAM E+L+NP +L+K + E+ +         E+D+  L YL+ V KET RLH  +PLL+P +   ++E  G+  P   +V+VN W +GRD +  D+   F PERF
Sbjct:  314 WAMVEMLKNPRVLAKAQAEVREAFRNKVTFDENDVEDLKYLKLVIKETMRLHAPIPLLVPRECRKETEINGYTIPVKTKVMVNVWALGRDPKYWDDVECFKPERF 418          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.431e-17
Identity = 45/106 (42.45%), Postives = 65/106 (61.32%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIG-KCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            WA+TEL+RN  ++ KV+ E+   +G K   I E D++ L Y + V KE FRLHPAVP LLP +  +  +  G+  P   Q+++N + I RD +L  NP  F P+RF
Sbjct:  311 WAITELVRNRKVMKKVQEEIRTTLGDKKERITEQDLTNLHYFKLVVKEIFRLHPAVPFLLPRETLSHVKIQGYDIPAKTQIMINVYAIARDPKLWTNPDEFNPDRF 416          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.093e-17
Identity = 45/106 (42.45%), Postives = 63/106 (59.43%), Query Frame = -2
Query:    6 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 323
            EW + EL+ +P+I  K+R EL+  +G  + I E D  +LPYL AV KET RL  A+PLL+P     D++  GF  P  +++LVN W +  +     NP  F PERF
Sbjct:  316 EWGIAELVNHPEIQKKLRHELDTLLGPGHQITEPDTYKLPYLNAVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPAHWKNPEEFRPERF 421          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.093e-17
Identity = 45/106 (42.45%), Postives = 63/106 (59.43%), Query Frame = -2
Query:    6 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 323
            EW + EL+ +P+I  K+R EL+  +G  + I E D  +LPYL AV KET RL  A+PLL+P     D++  GF  P  +++LVN W +  +     NP  F PERF
Sbjct:  316 EWGIAELVNHPEIQKKLRHELDTLLGPGHQITEPDTYKLPYLNAVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPAHWKNPEEFRPERF 421          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: TCMO_CICAR (Trans-cinnamate 4-monooxygenase OS=Cicer arietinum GN=CYP73A19 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 7.093e-17
Identity = 43/106 (40.57%), Postives = 65/106 (61.32%), Query Frame = -2
Query:    6 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 323
            EW + EL+ +  I +KVR E+++ +G  + + E D+ +LPYLQAV KET RL  A+PLL+P     D++ +GF  P  +++LVN W +  +      P  F PERF
Sbjct:  315 EWGIAELVNHQKIQNKVREEIDRVLGPGHQVTEPDLQKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLSGFDIPAESKILVNAWWLANNPAQWKKPEEFRPERF 420          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.093e-17
Identity = 46/106 (43.40%), Postives = 62/106 (58.49%), Query Frame = -2
Query:    6 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 323
            EW + EL+ +P+I  K+R ELE  +G    I E D  +LPYLQAV KET RL  A+PL LP     D++  G+  P  +++LVN W +  + E    P  F PERF
Sbjct:  316 EWGIAELVNHPEIQKKLRDELETVLGPGVQITEPDTYKLPYLQAVIKETLRLRMAIPLFLPHMNLHDAKLGGYDIPAESKILVNAWFLANNPEHWKKPEEFRPERF 421          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C78A4_PINRA (Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.093e-17
Identity = 43/108 (39.81%), Postives = 61/108 (56.48%), Query Frame = -2
Query:    6 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPAD--SEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 323
            EW M EL+ +P+   K + EL+  +G    + +SDI +LPY+QAV KE  R+HP  PLL   +   +  + G G   P G   +VN W I  D  + ++PY F PERF
Sbjct:  356 EWTMAELVLHPEAQKKAQAELDAVVGHDRSVKDSDIPKLPYIQAVVKEALRMHPPGPLLSWARLSTEDVNMGDGMCVPAGTTAMVNMWSITHDPNIWESPYEFRPERF 463          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71BE_ARATH (Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=CYP71B14 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.093e-17
Identity = 42/105 (40.00%), Postives = 62/105 (59.05%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            W MT L++NP ++ K + E+ + I   + I E DI RL YL+ V KET R++P VPLL+P +A    +  G+  P    + VN W + R+  +  +P  FIPERF
Sbjct:  308 WVMTHLIKNPRVMKKAQAEVREVIKNKDDITEEDIERLEYLKMVIKETLRINPLVPLLIPREASKYIKIGGYDIPKKTWIYVNIWAVQRNPNVWKDPEVFIPERF 412          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.093e-17
Identity = 43/105 (40.95%), Postives = 62/105 (59.05%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            W MT L++NP ++ K + E+ + I   + I E DI  L YL+ V KET R++P VPLL P +A  D +  G+  P    + VN W I R+  +  +P +FIPERF
Sbjct:  308 WVMTHLIKNPRVMKKAQAEVREVIKNKDNITEEDIEGLEYLKMVVKETLRINPLVPLLTPREASKDVKIGGYNIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERF 412          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: TCMO_MEDSA (Trans-cinnamate 4-monooxygenase OS=Medicago sativa GN=CYP73A3 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.210e-16
Identity = 44/106 (41.51%), Postives = 64/106 (60.38%), Query Frame = -2
Query:    6 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 323
            EW + EL+ + DI +KVR E+++ +G  + + E D+ +LPYLQAV KET RL  A+PLL+P     D +  GF  P  +++LVN W +  +      P  F PERF
Sbjct:  317 EWGIAELVNHQDIQNKVREEMDRVLGPGHQVTEPDLHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDPKLNGFDIPAESKILVNAWWLPNNPAHWKKPEEFRPERF 422          
The following BLAST results are available for this feature:
BLAST of CB294021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
C71D6_SOLCH4.158e-1740.00Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C71BT_ARATH5.431e-1742.45Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
TCMO_POPTM7.093e-1742.45Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
TCMO_POPKI7.093e-1742.45Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
TCMO_CICAR7.093e-1740.57Trans-cinnamate 4-monooxygenase OS=Cicer arietinum... [more]
TCMO_CATRO7.093e-1743.40Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]
C78A4_PINRA7.093e-1739.81Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 P... [more]
C71BE_ARATH7.093e-1740.00Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=C... [more]
C71BD_ARATH7.093e-1740.95Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]
TCMO_MEDSA1.210e-1641.51Trans-cinnamate 4-monooxygenase OS=Medicago sativa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01aa05_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01aa05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB294021 ID=CB294021; Name=CB294021; organism=Citrus sinensis; type=EST; length=324bp
CCCCAAAACCTCTCTGGAATAAAAGAGTATGGGTTGTCCCTTAATTCACC
ATCCCTTCCTATACCCCATGGGTTGACTAAAACTTGGGCCCCATTTGGCC
CCTTGAACCCGGCACCTTCTGAATCTGCTGGGGCTTTACCGGGAAGTAAA
AGAGGAACTGCCGGGTGCAACCGGAAGGTTTCTTTGAATACTGCTTGTAA
ATAAGGCAAGCGGCTGATGTCTGATTCCCCAATTGGATTGCATTTCCCAA
TCGGTTGTTCCAACTCTAATCGGACTTTTGATAAAATATCTGGGTTGCGA
AGTAGTTCTGTCATTGCCCATTCC
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