CB294024

Overview
NameCB294024
Unique NameCB294024
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.100e-18
Identity = 55/205 (26.83%), Postives = 98/205 (47.80%), Query Frame = -2
Query:  134 DAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQ--SKIDTAEKGG 742
            D+Q K  I  + +   + +   A  ET+  +  W +AEL+ +P +  K + E+   L     +   D  +L Y+++V+KET+R+   IP L+P     + ++ GY +P +++I++N W +  NP  W+K                +  G+DF ++PFG GRR CP              +L+ +F+     G   S +D +E  G
Sbjct:  276 DSQIKVPITTNAIKAFIFDTFSAGTETSSTTTLWVMAELMRNPAVMAKAQAEVRAALKGKTSVDVDDVQELKYMKSVVKETMRMHPPIP-LIPRSCREECEVNGYKIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSR--DFMGSDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPSDMDMSEAEG 477          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: C71DF_MENPI (Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D15 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.100e-18
Identity = 56/205 (27.32%), Postives = 96/205 (46.83%), Query Frame = -2
Query:  134 DAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQ--SKIDTAEKGG 742
            D Q K  I  +++   + +   A  ET+  +  W +AEL+ +P +  K + E+   L         D  +L Y+++V+KET+R+   IP L+P     +  + GY +P +++I++N W +  NP  W+K                +  GNDF ++PFG GRR CP              +L+ +F+     G   S +D +E  G
Sbjct:  277 DTQIKVPITTNSIKAFIFDTFSAGTETSSTTTLWVLAELMRNPAVMAKAQAEVRAALKEKTNWDVDDVQELKYMKSVVKETMRMHPPIP-LIPRSCREECVVNGYTIPNKARIMINVWSMGRNPLYWEKPDTFWPERFDQVSK--DFMGNDFEFVPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPSDMDMSEAEG 478          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP1A1_RABIT (Cytochrome P450 1A1 OS=Oryctolagus cuniculus GN=CYP1A1 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.437e-18
Identity = 55/193 (28.50%), Postives = 86/193 (44.56%), Query Frame = -2
Query:  167 LDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPG 745
            LD     +++++  + IV ++  A  +T   +I W +  LV  P IQ+K++ ELD V+G   +    D  +LPYL+AVI ET R    +P  +PH    D  LGG+ +P    + VN W   ++P  W                 V+    + + L FG+G+R C                L+Q  E    PG
Sbjct:  298 LDENANVQVSDEKTVGIVLDLFGAGFDTVTTAISWSLMYLVTKPRIQRKIQEELDAVVGRARRPRFSDRPQLPYLEAVIMETFRHTSFLPFTIPHSTTRDTSLGGFYIPKGRCVFVNQWQNNHDPELWGDPEAFRPERFLTPSGAVDKALTE-KVLLFGLGKRKCIGETIGRLEVFLFLATLLQQVEFSVSPG 489          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP1A1_MESAU (Cytochrome P450 1A1 OS=Mesocricetus auratus GN=CYP1A1 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.437e-18
Identity = 58/204 (28.43%), Postives = 92/204 (45.10%), Query Frame = -2
Query:  152 DHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQW---KKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKID 754
            D  LD     ++++D V+ I+ ++  A  +T   +I W +  LV +P +Q+K++ ELDTV+G   +    D  +LPYL+A I ET R    +P  +PH    D  L G+ +P    + VN W + +N   W    K              KV +     +   FG+G+R C                L+Q  E    PG+ K+D
Sbjct:  295 DKSLDENANVQLSDDRVINIIVDLFGAGFDTVTTAISWSLMYLVTNPGVQRKIQEELDTVIGRSRRPRLCDRSQLPYLEAFILETFRHSSFLPFTIPHSTTRDTSLCGFYIPKGHCVFVNQWQINHNQELWGDPNKFRPERFLTSSGTLDKVLSG----KVTLFGLGKRKCIGETIGRLEVFLFLAILLQQIEFTVSPGE-KVD 493          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP17A_PAPCY (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Papio cynocephalus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.437e-18
Identity = 54/187 (28.88%), Postives = 96/187 (51.34%), Query Frame = -2
Query:  164 INEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFEL-LPPPGQ 721
            ++++++L  + +I  A +ETT   ++W +A L+++P+++KKL  E+D  +G     T  D ++L  L+A I+E LR+R   P+L+PH    D+ +G + V   + +++N W L +N  +W +             +  +       YLPFG G RSC                L+Q F+L +P  GQ
Sbjct:  287 LSDNHILTTIGDIFGAGVETTTSVVKWIVAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRIRPVAPMLIPHKANVDSSIGEFAVDKGTHVIINLWALHHNEKEWHQ-PDQFMPERFLNPAGTQLISPSLSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQ 472          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP17A_MACMU (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Macaca mulatta GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.437e-18
Identity = 54/187 (28.88%), Postives = 96/187 (51.34%), Query Frame = -2
Query:  164 INEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFEL-LPPPGQ 721
            ++++++L  + +I  A +ETT   ++W +A L+++P+++KKL  E+D  +G     T  D ++L  L+A I+E LR+R   P+L+PH    D+ +G + V   + +++N W L +N  +W +             +  +       YLPFG G RSC                L+Q F+L +P  GQ
Sbjct:  287 LSDNHILTTIGDIFGAGVETTTSVVKWIVAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRIRPVAPMLIPHKANVDSSIGEFAVDKGTHVIINLWALHHNEKEWHQ-PDQFMPERFLNPAGTQLISPSLSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQ 472          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP17A_MACFA (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Macaca fascicularis GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.437e-18
Identity = 54/187 (28.88%), Postives = 96/187 (51.34%), Query Frame = -2
Query:  164 INEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFEL-LPPPGQ 721
            ++++++L  + +I  A +ETT   ++W +A L+++P+++KKL  E+D  +G     T  D ++L  L+A I+E LR+R   P+L+PH    D+ +G + V   + +++N W L +N  +W +             +  +       YLPFG G RSC                L+Q F+L +P  GQ
Sbjct:  287 LSDNHILTTIGDIFGAGVETTTSVVKWIVAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRIRPVAPMLIPHKANVDSSIGEFAVDKGTHVIINLWALHHNEKEWHQ-PDQFMPERFLNPAGTQLISPSLSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQ 472          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP17A_CAPHI (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Capra hircus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.437e-18
Identity = 56/202 (27.72%), Postives = 97/202 (48.02%), Query Frame = -2
Query:  116 INEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKIDTAEKGGQFSLHI 721
            ++  ++L  + +I  A +ETT   I+W +A L++HP ++K++++ +D  +G     T  D + L  L+A I+E LR+R   P+L+PH  + D+ +G   +   + ++VN W L +N  +W++             +  +       YLPFG G RSC               RL+Q F  L  P   K+ + E      L I
Sbjct:  287 LSNRHMLATIADIFGAGVETTTSVIKWIVAYLLHHPSLKKRIQDSIDQNIGFNRTPTISDRNCLVLLEATIREVLRIRPVAPMLIPHKAIIDSSIGDLTIDKGTDVVVNLWALHHNEKEWQQ-PDLFMPERFLDPTGTQLISPSLSYLPFGAGPRSCVGEMLARQELFLFMSRLLQRFN-LEIPDDGKLPSLEGNPSLVLQI 486          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP1A1_CANFA (Cytochrome P450 1A1 OS=Canis familiaris GN=CYP1A1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.877e-18
Identity = 53/201 (26.37%), Postives = 93/201 (46.27%), Query Frame = -2
Query:  152 DHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKID 754
            D  LD     +++++ ++ +V ++  A  +T   +I W +  LV +P +QKK++ ELDTV+G   Q    D  +LPY++A I ET R    +P  +PH    D  L G+ +P    + VN W + ++   W              +  +    ++ + + FG+G+R C                L+Q  E   P G +K+D
Sbjct:  295 DKRLDENANIQLSDEKIVNVVLDLFGAGFDTVTTAISWSLLYLVTNPNVQKKIQKELDTVIGRARQPRLSDRPQLPYMEAFILETFRHASFVPFTIPHSTTRDTSLSGFYIPKGRCVFVNQWQINHDQKLWGNPSEFQPERFLTLDGTINKALSE-KVILFGLGKRKCIGETIARLEVFLFLAILLQQVEFSVPEG-TKVD 493          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: C82A3_SOYBN (Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.877e-18
Identity = 63/244 (25.82%), Postives = 104/244 (42.62%), Query Frame = -2
Query:   83 RKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVE-NINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHWTIVAKPR 811
            +KKL      S+      +   L+    G  + D +       + +   ++T  ++ W ++ L+ +P    K + E+D  +G    I E D  KL YLQA++KETLRL    P   P     +  LGGY +   ++++ N W +  +P+ W                 V+  G++F  LPFG GRR C                L+ +F++L P  +  +D  E  G F+        I+ KPR
Sbjct:  277 QKKLLGENVESDRDFMDVMISALNGAQIGAFDADTICKATSLELILGGTDSTAVTLTWALSLLLRNPLALGKAKEEIDMQIGKDEYIRESDISKLVYLQAIVKETLRLYPPAPFSSPREFTENCILGGYHIKKGTRLIHNLWKIHRDPSVWSDPLEFKPERFLTTHKDVDLRGHNFELLPFGSGRRVCAGMSLGLNMVHFTLANLLHSFDILNPSAE-PVDMTEFFG-FTNTKATPLEILVKPR 518          
The following BLAST results are available for this feature:
BLAST of CB294024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 341
Match NameE-valueIdentityDescription
C7D95_MENSP1.100e-1826.83Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C71DF_MENPI1.100e-1827.32Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D... [more]
CP1A1_RABIT1.437e-1828.50Cytochrome P450 1A1 OS=Oryctolagus cuniculus GN=CY... [more]
CP1A1_MESAU1.437e-1828.43Cytochrome P450 1A1 OS=Mesocricetus auratus GN=CYP... [more]
CP17A_PAPCY1.437e-1828.88Steroid 17-alpha-hydroxylase/17,20 lyase OS=Papio ... [more]
CP17A_MACMU1.437e-1828.88Steroid 17-alpha-hydroxylase/17,20 lyase OS=Macaca... [more]
CP17A_MACFA1.437e-1828.88Steroid 17-alpha-hydroxylase/17,20 lyase OS=Macaca... [more]
CP17A_CAPHI1.437e-1827.72Steroid 17-alpha-hydroxylase/17,20 lyase OS=Capra ... [more]
CP1A1_CANFA1.877e-1826.37Cytochrome P450 1A1 OS=Canis familiaris GN=CYP1A1 ... [more]
C82A3_SOYBN1.877e-1825.82Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS01_01aa07_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01aa07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB294024 ID=CB294024; Name=CB294024; organism=Citrus sinensis; type=EST; length=821bp
TGAACCGACTTAGAAAAAACCATTCAACCACTATGAAACAGTCTTAACAT
TACAACCAAATGGAATTGTGAAACTAGAATGATCTAGGCTTGGCAACAAT
GGTCCAGTGCTTCAAAATGTGCAAACTGAACTGCCCACCTTTCTCTGCAG
TGTCAATCTTAGATTGACCTGGAGGAGGCAAGAGCTCAAAGTTCTGTACC
AAACGCCCAATAGTGATACCAAGAATTGGCAAAGCAAGGATAATTCCAGG
GCAGCTTCTTCTTCCAACACCGAAAGGAAGGTAACGGAAGTCATTTCCAT
TAGCCTCAACCTTGGACTCCTCCTCCAAAAACCTCTCAGGCCTGAATTCT
TCAGGTTTCTTCCATTGGGCGGGATTGTTGGCGAGCCACCACGCGTTCAC
TAGGATTTTGCTCTCAGCAGGGACGTCGTAGCCTCCAAGCTTGGCGTCGT
GAAGGTTCATGTGCGGGACAAGAAGAGGAATTGCCATCCTAAGGCGAAGA
GTTTCCTTGATCACGGCCTGAAGGTAGGGTAGTTTGTGGGTGTCAGGCTC
AGTGATTTGATGACCAGGACCAAGCACGGTGTCAAGTTCATTGCGGAGCT
TCTTCTGGATTTCAGGATGATTCACTAGCTCTGCAATTCCCCACTCGATC
GACCAAAGAGTTGTCTCGATTGCGGCAACATTGATGTTCTCAACGATGTA
TAGAACGTTGTCCTCGTTGATTTCTCCCTTTGTCTGAGCGTCCAAAATAT
GATCGATTGCGCATTTCAAGCTTTCATTACTCATGCTCTTCGTGCTTGCC
AATTTCTTTCTCTCCTCAACA
back to top