CB294024

Overview
NameCB294024
Unique NameCB294024
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP2D4_RAT (Cytochrome P450 2D4 OS=Rattus norvegicus GN=Cyp2d4 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.487e-15
Identity = 47/194 (24.23%), Postives = 91/194 (46.91%), Query Frame = -2
Query:  158 KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFR---YLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSK 730
            +   N++N+  +V ++ +A + TT  ++ W +  ++ HP++Q +++ E+D V+G   +    D  ++P+  AVI E  R    +PL VPH    D ++ G+ +P  + ++ N   +  +   W+K               ++A GN  +   ++PF  GRR+C                L+Q F    P GQ +
Sbjct:  290 ESSFNDENLRVVVADLFMAGMVTTSTTLTWALLFMILHPDVQCRVQQEIDEVIGQVRRPEMADQARMPFTNAVIHEVQRFADILPLGVPHKTSRDIEVQGFLIPKGTTLITNLSSVLKDETVWEKPLRFHPEHF------LDAQGNFVKHEAFMPFSAGRRACLGEPLARMELFLFFTCLLQRFSFSVPTGQPR 477          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: KO1_ARATH (Ent-kaurene oxidase OS=Arabidopsis thaliana GN=KO1 PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.942e-15
Identity = 63/234 (26.92%), Postives = 109/234 (46.58%), Query Frame = -2
Query:  149 EERKKLASTKSMSNESLK---------CAIDHIL-DAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSK-IDT 817
            + +++LA   ++  + LK         C ++ ++ +A+T   + ++ +  +V    +   +TTL + EW I EL  HP +Q +L  E+  V G G +  E    ++PYL  V  ETLR     PL+       D ++GGY VPA S+I +N +    +  +W++            + K E + +  + + FG G+R C              GRLVQ FE     G+ + +DT
Sbjct:  262 KHKRRLAVMNALIQDRLKQNGSESDDDCYLNFLMSEAKT---LTKEQIAILVWETIIETADTTLVTTEWAIYELAKHPSVQDRLCKEIQNVCG-GEKFKEEQLSQVPYLNGVFHETLRKYSPAPLVPIRYAHEDTQIGGYHVPAGSEIAINIYGCNMDKKRWER-PEDWWPERFLDDGKYETS-DLHKTMAFGAGKRVCAGALQASLMAGIAIGRLVQEFEWKLRDGEEENVDT 489          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP2J6_MOUSE (Cytochrome P450 2J6 OS=Mus musculus GN=Cyp2j6 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.942e-15
Identity = 54/200 (27.00%), Postives = 84/200 (42.00%), Query Frame = -2
Query:  173 IDHILDAQTK-----GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPP 757
            ID  L   TK        NE+N++    ++  A  ETT  ++ W +  +  +PE+Q+K++ E+D V+G        D   +PY  AVI E  R+   IPL VP     D  L G+ +P  + +L N   L  +P +W                  +       +LPF +G+R+C                L+Q F   PP
Sbjct:  278 IDAFLKEMTKYPEKTTSFNEENLICSTLDLFFAGTETTSTTLRWALLYMALYPEVQEKVQAEIDRVIGQKRAARLADRESMPYTNAVIHEVRRMGNIIPLNVPREVAMDTNLNGFHLPKGTMVLTNLTALHRDPKEWATPDVFNPEHFLENGQFKKRES----FLPFSMGKRACLGEQLARSELFIFFTSLMQKFTFNPP 473          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP1A1_ONCMY (Cytochrome P450 1A1 OS=Oncorhynchus mykiss GN=cyp1a1 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.942e-15
Identity = 51/206 (24.76%), Postives = 86/206 (41.75%), Query Frame = -2
Query:  137 DHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKIDTAEKG 754
            D  LD     +++++ ++ IV ++  A  +T   ++ W +  LV +PEIQ++L  EL   +G        D   LP L+A I E  R    +P  +PH  + D  L GY +P ++ + +N W + ++P  WK+            +          + L FG+ +R C                L+Q       PG     T E G
Sbjct:  296 DRKLDENANIQVSDEKIVGIVNDLFGAGFDTISTALSWAVVYLVAYPEIQERLHQELKEKVGMIRTPRLSDKINLPLLEAFILEIFRHSSFLPFTIPHCTIKDTSLNGYFIPKDTCVFINQWQVNHDPELWKEPSSFNPDRFLSADGTELNKLEGEKVLVFGMDKRRCIGEAIGRNEVYLFLAILLQRLRFQEKPGHPLDMTPEYG 501          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP2DS_MESAU (Cytochrome P450 2D28 OS=Mesocricetus auratus GN=CYP2D28A PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.313e-15
Identity = 45/194 (23.20%), Postives = 88/194 (45.36%), Query Frame = -2
Query:  158 KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANG---NDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSK 730
            +   N+ N+  +V ++ +A   +T  ++ W +  ++ +P++Q++++ E+D +LGPG      D  ++PY  AVI E  R     PL +P +   D ++ G+ +P  + ++ N   +  +   W+K               ++A G       ++PF  GRR+C                L+Q F    P GQ +
Sbjct:  290 ESSFNDQNLRMVVNDLFIAGTVSTSTTLSWALLFMIQYPDVQRRVQQEIDDILGPGRSPEMADQARMPYTNAVIHEVQRFADIAPLNLPCITSRDIEVQGFLIPKGTTLITNLSSVLKDETVWEKPLHFHPEHF------LDAQGCFVKQEAFMPFSAGRRACLGEPLARMELFLFFTCLLQRFSFSVPAGQPR 477          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP1A1_OPSTA (Cytochrome P450 1A1 OS=Opsanus tau GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.313e-15
Identity = 51/212 (24.06%), Postives = 89/212 (41.98%), Query Frame = -2
Query:  137 DHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLP------FGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKIDTAEKG 754
            D  LD     +++++ ++ IV ++  A  +T    + W +  LV +PEIQ++L  E+   +G        D   LP+L A I E  R    +P  +PH    +  L GY +P ++ + +N W + ++P  WK                + A+G +   L       FG+G+R C                ++Q  +    PG+    T E G
Sbjct:  296 DRKLDENCNVQVSDEKIVGIVNDLFGAGFDTVSTGLSWSVMYLVAYPEIQERLYQEIKDSVGTERMPLLSDRPSLPFLDAFILEIFRHSSFLPFTIPHCTTKNTSLNGYFIPKDTCVFINQWQINHDPELWKDPFSFNPERF------LSADGTELNRLEGEKVMLFGLGKRRCIGEVIARNEVFLFLAIIIQRLQFHMLPGEPLDMTPEYG 501          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP1A1_DICLA (Cytochrome P450 1A1 OS=Dicentrarchus labrax GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.313e-15
Identity = 50/206 (24.27%), Postives = 87/206 (42.23%), Query Frame = -2
Query:  137 DHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKIDTAEKG 754
            D  LD     +++++ ++ IV ++  A  +T   ++ W +  LV +PEI+++L  EL   +G        D   LP+L+A I E  R    +P  +PH    D  L GY +P ++ + +N W + ++P  WK             +          + + FG+G+R C                +VQ       PG+    T E G
Sbjct:  297 DRKLDENANVQMSDEKIVGIVNDLFGAGFDTISTALSWSVMYLVAYPEIEERLYQELKENVGLDRTPLLCDRPNLPFLEAFILEIFRHSSFLPFTIPHCTSKDTSLNGYFIPKDTCVFINQWQINHDPELWKDPSSFNPDRFLSADGTELNKLEGEKVMVFGLGKRRCIGEVIARNGVFLFLAIIVQKLHFKTLPGEPLDMTPEYG 502          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP2DQ_RAT (Cytochrome P450 2D26 OS=Rattus norvegicus GN=Cyp2d26 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 4.327e-15
Identity = 41/163 (25.15%), Postives = 82/163 (50.31%), Query Frame = -2
Query:  251 KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFR---YLPFGVGRRSC 730
            +   N++N+  +V ++ +A + TT  ++ W +  ++ HP++Q+++  E+D V+G   +    D  ++P+  AVI E  R    +P  +PHM   D K  G+ +P  + ++ N   +  +   W+K               ++A GN  +   ++PF  GRR+C
Sbjct:  290 ESSFNDENLRLVVIDLFMAGMVTTSTTLSWALLLMILHPDVQRRVHEEIDEVIGQVRRPEMADQARMPFTNAVIHEVQRFADIVPTNIPHMTSRDIKFQGFLIPKGTTLIPNLSSVLKDETVWEKPLRFHPEHF------LDAQGNFVKHEAFMPFSAGRRAC 446          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP1A5_CHICK (Cytochrome P450 1A5 OS=Gallus gallus GN=CYP1A5 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.327e-15
Identity = 43/180 (23.89%), Postives = 83/180 (46.11%), Query Frame = -2
Query:  251 KSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 790
            + +++  ++  ++   +A    +I  + ++ +V +I  A  +T   ++ W +  LV +P +QKK++ ELD  +G   +    D   LPY +A I E  R    +P  +PH    D  L GY +P +  + +N W + ++   WK             E       +  + + FG+G+R C
Sbjct:  288 RDVTDSLIEQCVEKKAEANGATQIPNEKIINLVNDIFGAGFDTVTTALSWSLMYLVTYPHMQKKIQAELDQTIGRERRPRLSDRGMLPYTEAFILEMFRHSSFMPFTIPHSTTRDTVLNGYYIPKDRCVFINQWQVNHDEKLWKDPQAFNPERFLNAEGTEVNKVDAEKVMTFGLGKRRC 467          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: C79F2_ARATH (Hexahomomethionine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79F2 PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 4.327e-15
Identity = 57/203 (28.08%), Postives = 84/203 (41.38%), Query Frame = -2
Query:  188 KCAIDHILDAQTKGEINEDNVLYIVENIN-------VAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWK---KXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNF 766
            K A++  LD     +    N L   + I        +AAI+    ++EW + E++ +PEI +K   ELD V+G    + E D   L YL+A  +ET R+  +   + PH+   D  LGGY +P  S I V    L  NP  WK                  +V     + R++ F  GRR C               R +Q F
Sbjct:  291 KAAVEDWLDTFITLKDQNGNYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQESDIRNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLAYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMAMMLARFLQGF 493          
The following BLAST results are available for this feature:
BLAST of CB294024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 341
Match NameE-valueIdentityDescription
CP2D4_RAT1.487e-1524.23Cytochrome P450 2D4 OS=Rattus norvegicus GN=Cyp2d4... [more]
KO1_ARATH1.942e-1526.92Ent-kaurene oxidase OS=Arabidopsis thaliana GN=KO1... [more]
CP2J6_MOUSE1.942e-1527.00Cytochrome P450 2J6 OS=Mus musculus GN=Cyp2j6 PE=2... [more]
CP1A1_ONCMY1.942e-1524.76Cytochrome P450 1A1 OS=Oncorhynchus mykiss GN=cyp1... [more]
CP2DS_MESAU3.313e-1523.20Cytochrome P450 2D28 OS=Mesocricetus auratus GN=CY... [more]
CP1A1_OPSTA3.313e-1524.06Cytochrome P450 1A1 OS=Opsanus tau GN=cyp1a1 PE=2 ... [more]
CP1A1_DICLA3.313e-1524.27Cytochrome P450 1A1 OS=Dicentrarchus labrax GN=cyp... [more]
CP2DQ_RAT4.327e-1525.15Cytochrome P450 2D26 OS=Rattus norvegicus GN=Cyp2d... [more]
CP1A5_CHICK4.327e-1523.89Cytochrome P450 1A5 OS=Gallus gallus GN=CYP1A5 PE=... [more]
C79F2_ARATH4.327e-1528.08Hexahomomethionine N-hydroxylase OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01aa07_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01aa07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB294024 ID=CB294024; Name=CB294024; organism=Citrus sinensis; type=EST; length=821bp
TGAACCGACTTAGAAAAAACCATTCAACCACTATGAAACAGTCTTAACAT
TACAACCAAATGGAATTGTGAAACTAGAATGATCTAGGCTTGGCAACAAT
GGTCCAGTGCTTCAAAATGTGCAAACTGAACTGCCCACCTTTCTCTGCAG
TGTCAATCTTAGATTGACCTGGAGGAGGCAAGAGCTCAAAGTTCTGTACC
AAACGCCCAATAGTGATACCAAGAATTGGCAAAGCAAGGATAATTCCAGG
GCAGCTTCTTCTTCCAACACCGAAAGGAAGGTAACGGAAGTCATTTCCAT
TAGCCTCAACCTTGGACTCCTCCTCCAAAAACCTCTCAGGCCTGAATTCT
TCAGGTTTCTTCCATTGGGCGGGATTGTTGGCGAGCCACCACGCGTTCAC
TAGGATTTTGCTCTCAGCAGGGACGTCGTAGCCTCCAAGCTTGGCGTCGT
GAAGGTTCATGTGCGGGACAAGAAGAGGAATTGCCATCCTAAGGCGAAGA
GTTTCCTTGATCACGGCCTGAAGGTAGGGTAGTTTGTGGGTGTCAGGCTC
AGTGATTTGATGACCAGGACCAAGCACGGTGTCAAGTTCATTGCGGAGCT
TCTTCTGGATTTCAGGATGATTCACTAGCTCTGCAATTCCCCACTCGATC
GACCAAAGAGTTGTCTCGATTGCGGCAACATTGATGTTCTCAACGATGTA
TAGAACGTTGTCCTCGTTGATTTCTCCCTTTGTCTGAGCGTCCAAAATAT
GATCGATTGCGCATTTCAAGCTTTCATTACTCATGCTCTTCGTGCTTGCC
AATTTCTTTCTCTCCTCAACA
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