CB294024

Overview
NameCB294024
Unique NameCB294024
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: C508B_DICDI (Probable cytochrome P450 508B1 OS=Dictyostelium discoideum GN=cyp508b1 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.327e-15
Identity = 54/168 (32.14%), Postives = 76/168 (45.24%), Query Frame = -2
Query:  182 VAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGG--YDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFEL 679
            +A  +TT  SI W +  +  HPEIQ K  NE+   +G   ++   D  K PYL A+IKE LRL    P  +PH + +D  +G   Y +P +S+ILVN   L  N   ++                   N N+  Y+PFGVG R C                ++ NF L
Sbjct:  295 LAGNDTTAASIIWFVLRMQEHPEIQLKAYNEIKDAVGDRDRVLLSDRPKTPYLNAIIKEILRLNPVGPFGLPHRSSNDIVIGNGKYFIPKDSQILVNYRGLGFNEKYFENPSQFDPSRF--------LNKNNDAYMPFGVGDRKCVGLQLAGDEQYLSFSNILLNFNL 454          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP2DQ_MOUSE (Cytochrome P450 2D26 OS=Mus musculus GN=Cyp2d26 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.651e-15
Identity = 47/194 (24.23%), Postives = 87/194 (44.85%), Query Frame = -2
Query:  158 KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFR---YLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSK 730
            +   N+ N+  +V ++ +A + TT  ++ W +  ++ HP++Q+++  E+D V+G        D  ++PY  AVI E  R    +P  +PHM   D K   + +P  + ++ N   +  +   W+K               ++A G+  +   ++PF  GRRSC                L+Q F    P GQ +
Sbjct:  290 ESSFNDKNLRIVVIDLFMAGMVTTSTTLSWALLLMILHPDVQRRVHQEIDEVIGHVRHPEMADQARMPYTNAVIHEVQRFADIVPTNLPHMTSRDIKFQDFFIPKGTTLIPNLSSVLKDETVWEKPLRFYPEHF------LDAQGHFVKHEAFMPFSAGRRSCLGEPLARMELFLFFTCLLQRFSFSVPDGQPR 477          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP2DI_RAT (Cytochrome P450 2D18 OS=Rattus norvegicus GN=Cyp2d18 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.651e-15
Identity = 46/194 (23.71%), Postives = 91/194 (46.91%), Query Frame = -2
Query:  158 KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFR---YLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSK 730
            +   N++N+  +V ++ +A + TT  ++ W +  ++  P++Q +++ E+D V+G   +    D  ++P+  AVI E  R    +PL VPH    D ++ G+ +P  + +++N   +  +   W+K               ++A GN  +   ++PF  GRR+C                L+Q F    P GQ +
Sbjct:  290 ESSFNDENLRVVVADLFMAGMVTTSTTLTWALLFMILRPDVQCRVQQEIDEVIGQVRRPEMADQARMPFTNAVIHEVQRFADILPLGVPHKTSRDIEVQGFLIPKGTTLIINLSSVLKDETVWEKPLRFHPEHF------LDAQGNFVKHEAFMPFSAGRRACLGEPLARMELFLFFTCLLQRFSFSVPAGQPR 477          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP2D9_MOUSE (Cytochrome P450 2D9 OS=Mus musculus GN=Cyp2d9 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.651e-15
Identity = 47/192 (24.48%), Postives = 90/192 (46.88%), Query Frame = -2
Query:  164 KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFR---YLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQ 730
            +   N++N+L +V ++  A + TT  ++ W +  ++ HP++Q++++ E+D V+G        D   +PY  AVI E  R    +P+ +P +  HD ++  + +P  + +L N   +  + + W+K               ++A G+  +   ++PF  GRRSC                L+Q F    P GQ
Sbjct:  290 ESSFNDENLLMVVRDLFGAGMLTTSTTLSWALMLMILHPDVQRRVQQEIDEVIGQVRHPEMADQAHMPYTNAVIHEVQRFGDIVPVNLPRITSHDIEVQDFLIPKGTILLPNMSSMLKDESVWEKPLRFHPEHF------LDAQGHFVKPEAFMPFSAGRRSCLGEALARMELFLFFTCLLQRFSFSVPDGQ 475          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP2K1_ONCMY (Cytochrome P450 2K1 OS=Oncorhynchus mykiss GN=cyp2k1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.380e-15
Identity = 49/192 (25.52%), Postives = 86/192 (44.79%), Query Frame = -2
Query:  152 NEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFR---YLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKID 718
            ++DN+++ V N+  A  +TT  ++ WG+  +  +P IQ +++ E+  V+G    + E D   LPY  AVI ET RL   +P+ VPH    D    GY +   + ++     +  + ++W+                ++  G   +   ++ F  GRR C                L+Q F   PPPG ++ D
Sbjct:  296 HDDNLVFSVGNLFSAGTDTTGTTLRWGLLLMTKYPHIQDQVQEEISRVIGSRQTLVE-DRKNLPYTDAVIHETQRLANIVPMSVPHTTSRDVTFQGYFIKKGTSVIPLLTSVLQDDSEWESPNTFNPSHF------LDEQGGFVKRDAFMAFSAGRRVCLGEGLARMELFLFFTSLLQRFRFSPPPGVTEDD 480          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: C508D_DICDI (Probable cytochrome P450 508D1 OS=Dictyostelium discoideum GN=cyp508d1 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.380e-15
Identity = 54/197 (27.41%), Postives = 92/197 (46.70%), Query Frame = -2
Query:  149 GEINEDNVLYIVE---NINVAAIETTLWSIEWGIAELVNHPEIQKKLRNEL-DTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKIDT 727
            G+ +++N++ IV+   ++ +A ++T   S+EW +  L N+ +IQ  + NEL +TV+GP   +T  D    PY  A IKET+RL+   P  +PH    D  + G+ +P +S +L+N + L  NP  +                          ++PFG G R+C                +  NF++    G+   DT
Sbjct:  276 GDHSDENMISIVQVCFDVILAGVDTLASSLEWFLVMLCNNQQIQDTVYNELKETVVGP--VVTLNDRPSTPYTMACIKETIRLKAPAPFGLPHTTDQDIIVKGHFIPKDSMVLINFYSLGRNPKDFPDPLKFDPNRF--------IGSTPDSFMPFGTGPRNCIGQALGMDQIYLLLSNIFLNFKITSENGKKLDDT 462          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP1A4_CHICK (Cytochrome P450 1A4 OS=Gallus gallus GN=CYP1A4 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.639e-15
Identity = 50/211 (23.70%), Postives = 89/211 (42.18%), Query Frame = -2
Query:  137 IDHILDAQTKGEI----NEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKIDTAEKG 757
            I H  + +T  ++    ++++++ IV ++  A  +T   ++ W +     +P IQKK++ ELD  +G   +    D   LPY +A I E  R    +P  +PH    D  L GY +P ++ + +N W   ++   WK                  +     + L FG+G+R C                ++Q  E+   PGQ    T + G
Sbjct:  297 IGHCQEKRTGEDVRVQPSDESIISIVNDLFGAGFDTVTTALSWCMMYAALYPHIQKKIQAELDQTIGRERRPRLSDRGMLPYTEAFILEAFRHSSLLPFTIPHCTTKDTVLNGYYIPKDTCVFINQWQANHDEKIWKDPPSFKPERFLNAAGTELSRTEADKVLIFGLGKRRCIGESIGRWEVFLFLTTILQQLEISLAPGQRVDITPQYG 507          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP2J5_MOUSE (Cytochrome P450 2J5 OS=Mus musculus GN=Cyp2j5 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.259e-14
Identity = 50/192 (26.04%), Postives = 84/192 (43.75%), Query Frame = -2
Query:  173 DAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQW--KKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPP 742
            D       NE+N++    ++ +   ETT  ++ W +  + ++PEIQ+ ++ E+D V+G   Q++  D   +PY  AVI E  R+   +PL        D K  G+ +P  + IL N   L  +P +W   +              K E+      +LPF +G+R+C                L+Q F   PP
Sbjct:  288 DPDRTTSFNEENLISTTLDLFLGGTETTSSTLRWALLYMSSYPEIQENVQAEIDRVIGHKRQVSLSDRESMPYTNAVIHEVQRMGNIVPLNSSREVTVDTKFNGFHLPKGTMILTNLTALHRDPKEWATPEVFNPEHFLENGQFKKRES------FLPFSMGKRACLGEQLAKSELFIFFSALMQKFTFKPP 473          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP2DP_PIG (Vitamin D(3) 25-hydroxylase OS=Sus scrofa GN=CYP2D25 PE=1 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 1.644e-14
Identity = 51/203 (25.12%), Postives = 94/203 (46.31%), Query Frame = -2
Query:  164 IDHILDAQTKGE--INEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFR---YLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQ 757
            +D + +A+   E   N++N+  +V ++  A + TT  ++ W +  ++ HP++Q++++ E+D V+G   Q    D   +P+  AV+ E  R    +PL V HM   D ++ G+ +P  + ++ N   +  +   WKK               ++A G   +   ++PF  GRRSC                L+Q F    P GQ
Sbjct:  279 LDEMKEAKGNPESSFNDENLRLVVAHLFSAGMITTSTTLAWALLLMILHPDVQRRVQQEIDEVIGHVRQPEIKDQALMPFTLAVLHEVQRFGDIVPLGVAHMTSCDIEVQGFLIPKGTTLITNLTSVLKDETVWKKPFRFYPEHF------LDAQGRFTKQEAFMPFSAGRRSCLGEPLARMELFLFFTTLLQAFSFSVPTGQ 475          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP1A1_ORYLA (Cytochrome P450 1A1 OS=Oryzias latipes GN=cyp1a1 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.644e-14
Identity = 42/168 (25.00%), Postives = 77/168 (45.83%), Query Frame = -2
Query:  251 DHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 754
            D  LD  +  +++++ V+ IV ++  A  +T   ++ W +  LV +P+I+K L  E+   +G     T  D   LP   A I E  R    +P  +PH    D  L GY +P ++ + +N W + ++P  W+             +       +  + + FG+G+R C
Sbjct:  296 DRKLDENSNIQMSDEKVVGIVNDLFGAGFDTISTALSWAVGYLVAYPDIEKGLFEEIKENIGLNRNPTISDRSNLPLTDAFILEIFRHSSFLPFTIPHCTTRDTSLNGYYIPKDTCVFINQWQINHDPKLWQDPSSFNPDRFLSEDGSEVNRLDGEKVMVFGLGKRRC 463          
The following BLAST results are available for this feature:
BLAST of CB294024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 341
Match NameE-valueIdentityDescription
C508B_DICDI4.327e-1532.14Probable cytochrome P450 508B1 OS=Dictyostelium di... [more]
CP2DQ_MOUSE5.651e-1524.23Cytochrome P450 2D26 OS=Mus musculus GN=Cyp2d26 PE... [more]
CP2DI_RAT5.651e-1523.71Cytochrome P450 2D18 OS=Rattus norvegicus GN=Cyp2d... [more]
CP2D9_MOUSE5.651e-1524.48Cytochrome P450 2D9 OS=Mus musculus GN=Cyp2d9 PE=1... [more]
CP2K1_ONCMY7.380e-1525.52Cytochrome P450 2K1 OS=Oncorhynchus mykiss GN=cyp2... [more]
C508D_DICDI7.380e-1527.41Probable cytochrome P450 508D1 OS=Dictyostelium di... [more]
CP1A4_CHICK9.639e-1523.70Cytochrome P450 1A4 OS=Gallus gallus GN=CYP1A4 PE=... [more]
CP2J5_MOUSE1.259e-1426.04Cytochrome P450 2J5 OS=Mus musculus GN=Cyp2j5 PE=2... [more]
CP2DP_PIG1.644e-1425.12Vitamin D(3) 25-hydroxylase OS=Sus scrofa GN=CYP2D... [more]
CP1A1_ORYLA1.644e-1425.00Cytochrome P450 1A1 OS=Oryzias latipes GN=cyp1a1 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01aa07_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01aa07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB294024 ID=CB294024; Name=CB294024; organism=Citrus sinensis; type=EST; length=821bp
TGAACCGACTTAGAAAAAACCATTCAACCACTATGAAACAGTCTTAACAT
TACAACCAAATGGAATTGTGAAACTAGAATGATCTAGGCTTGGCAACAAT
GGTCCAGTGCTTCAAAATGTGCAAACTGAACTGCCCACCTTTCTCTGCAG
TGTCAATCTTAGATTGACCTGGAGGAGGCAAGAGCTCAAAGTTCTGTACC
AAACGCCCAATAGTGATACCAAGAATTGGCAAAGCAAGGATAATTCCAGG
GCAGCTTCTTCTTCCAACACCGAAAGGAAGGTAACGGAAGTCATTTCCAT
TAGCCTCAACCTTGGACTCCTCCTCCAAAAACCTCTCAGGCCTGAATTCT
TCAGGTTTCTTCCATTGGGCGGGATTGTTGGCGAGCCACCACGCGTTCAC
TAGGATTTTGCTCTCAGCAGGGACGTCGTAGCCTCCAAGCTTGGCGTCGT
GAAGGTTCATGTGCGGGACAAGAAGAGGAATTGCCATCCTAAGGCGAAGA
GTTTCCTTGATCACGGCCTGAAGGTAGGGTAGTTTGTGGGTGTCAGGCTC
AGTGATTTGATGACCAGGACCAAGCACGGTGTCAAGTTCATTGCGGAGCT
TCTTCTGGATTTCAGGATGATTCACTAGCTCTGCAATTCCCCACTCGATC
GACCAAAGAGTTGTCTCGATTGCGGCAACATTGATGTTCTCAACGATGTA
TAGAACGTTGTCCTCGTTGATTTCTCCCTTTGTCTGAGCGTCCAAAATAT
GATCGATTGCGCATTTCAAGCTTTCATTACTCATGCTCTTCGTGCTTGCC
AATTTCTTTCTCTCCTCAACA
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