CB294024

Overview
NameCB294024
Unique NameCB294024
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1684 contig Csv1_Contig1684:818..1638. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP2DA_RAT (Cytochrome P450 2D10 OS=Rattus norvegicus GN=Cyp2d10 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.818e-13
Identity = 47/208 (22.60%), Postives = 95/208 (45.67%), Query Frame = -2
Query:  116 KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFR---YLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKIDTAEKGGQFSLHI 730
            +   N++N+  +V ++  A + TT  ++ W +  ++ +P++Q++++ E+D V+G        D   +PY  AVI E  R     PL +P +   D ++  + +P  + +++N   +  +   W+K               ++A GN  +   ++PF  GRR+C                L+Q+F    P GQ +  T    G F++ +
Sbjct:  290 ESSFNDENLRMVVVDLFTAGMVTTATTLTWALLLMILYPDVQRRVQQEIDEVIGQVRCPEMTDQAHMPYTNAVIHEVQRFGDIAPLNLPRITSCDIEVQDFVIPKGTTLIINLSSVLKDETVWEKPLRFHPEHF------LDAQGNFVKHEAFMPFSAGRRACLGEPLARMELFLFFTCLLQHFSFSVPAGQPRPSTL---GNFAISV 488          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP24A_MOUSE (1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial OS=Mus musculus GN=Cyp24a1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.818e-13
Identity = 45/168 (26.79%), Postives = 83/168 (49.40%), Query Frame = -2
Query:  251 DHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 754
            D + D   +  +++  +   V  + +AA+ETT  S+ W +  L  +P++Q++L  E+ +VL         D   +PYL+A +KE++RL  ++P     ++     LG Y +P  + + +N   L ++   ++             E K+    N F +LPFGVG+R C
Sbjct:  300 DFLCDIYQQDHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQVQQRLLREIQSVLPDNQTPRAEDVRNMPYLKACLKESMRLTPSVPFTTRTLD-KPTVLGEYTLPKGTVLTLNTQVLGSSEDNFEDADKFRPERWLEKEKKI----NPFAHLPFGVGKRMC 462          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: C71AS_ARATH (Putative cytochrome P450 71A28 OS=Arabidopsis thaliana GN=CYP71A28 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.818e-13
Identity = 45/166 (27.11%), Postives = 71/166 (42.77%), Query Frame = -2
Query:  248 LDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCP 745
            L+   + E+   ++  I+    +    TT  +I+W +  +V HPE  KKL+ E+ T       + E +   + YL+AVIKE  RL    PL +P     D             + +NAW +  +  +W                 +   G DF ++PFG GRR CP
Sbjct:  278 LEKTNEFELERSDIRLIILEFFLGGTTTTFTAIDWAMTLVVRHPESMKKLQEEIQTYSRNKLYVPEEEVENMKYLKAVIKEVFRLHPPGPLSIPRQLSED-------------VFINAWAIHRDTEKWGPYAEEFKPERHLDL-PLNFQGQDFNFIPFGSGRRLCP 429          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: C516A_DICDI (Probable cytochrome P450 516A1 OS=Dictyostelium discoideum GN=cyp516a1 PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.374e-13
Identity = 47/189 (24.87%), Postives = 87/189 (46.03%), Query Frame = -2
Query:  251 EERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 817
            E R+KL       ++ L   I+ I  ++     +++ +  +  ++ ++  ET+  ++ W +  L+N+P  Q K+R EL    G    I   +  K P+  A IKE LR+R    L +P +   D   G Y +   S+I++N + LA +P  W+                 + + + + ++PFG G R C
Sbjct:  250 EHREKLLINPEKIDDLLDLFINEIKLSKNSEFFDDEGLYRVCSDLLLSGTETSSSTMSWLLLFLINNPNFQDKVRTELLEATGGKKTIGLTEKSKTPFFNACIKEALRIRPVGALSLPRIASEDVTCGPYTIEKGSQIIMNVYGLAMDPTVWEDPETFNPYRWL----SSDISQSTYSFIPFGCGSRVC 434          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP27B_RAT (25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial OS=Rattus norvegicus GN=Cyp27b1 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.101e-13
Identity = 57/224 (25.45%), Postives = 104/224 (46.43%), Query Frame = -2
Query:  167 VEERKKLASTKSMSN--ESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGH--QITEPDTHKLPYLQAVIKETLRLRMAIP--LLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPG 820
            VE+R+  A+ ++     E L     H+     + +++  +++  V  + +A ++T   ++ W + EL  HPE+Q  L +E+   + PG    +      +LP L+AVIKE LRL   +P    VP     D  +G Y +P ++ + +  +  + +PAQ+++                    + F  LPFG G+RSC               +++ +FE+LP PG
Sbjct:  261 VEQREGEAAVRNQGKPEEDLPTG-HHLTHFLFREKVSVQSIVGNVTELLLAGVDTVSNTLSWALYELSRHPEVQSALHSEITGAVNPGSYAHLQATALSQLPLLKAVIKEVLRLYPVVPGNSRVPD---RDICVGNYVIPQDTLVSLCHYATSRDPAQFREPNSFNPARWLGEGPA----PHPFASLPFGFGKRSCIGRRLAELELQMALAQILTHFEVLPEPG 476          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP2L1_PANAR (Cytochrome P450 2L1 OS=Panulirus argus GN=CYP2L1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.050e-13
Identity = 55/228 (24.12%), Postives = 97/228 (42.54%), Query Frame = -2
Query:   83 HILDAQTKGE-----INEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHWTIVAKPR 751
            +++D Q + E     +N + V  ++ ++  A  ETT   I W I  L+ +PE+Q K++ E+D  +  G   +     KL Y +A I E  R+   +PL V H    D +L GY +P  + ++ +      +P+ W+K            + K     +    + F VGRR C                ++QNF    P G+  + T +   Q      K + ++ + R
Sbjct:  268 YLIDLQERKEDPLSTMNIETVRAVIMDLFGAGTETTSTMIRWTILYLMKYPEVQAKIQREIDAAVPRGTLPSLEHKDKLAYFEATIHEVHRIVSLVPLGVSHYTNQDTELAGYRLPKGTVVMSHLECCHRDPSYWEKPNEFYPEHFLDDQGKFVKREH---LVNFSVGRRVCVGESLARMELFVFLSAILQNFTFSAPKGE-VLHTEKDPQQMLFSFPKPYQVIIRER 491          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP4V3_MOUSE (Cytochrome P450 4V3 OS=Mus musculus GN=Cyp4v3 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.289e-13
Identity = 49/180 (27.22%), Postives = 87/180 (48.33%), Query Frame = -2
Query:  251 SNESLKCAIDHILDAQTK--GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQ-ITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 781
            S    K  +D +L    +    ++++++   V+       +TT  +I W +  L  +PE+Q+K+  ELD V G  H+ +T  D  KL YL  VIKETLR+  ++PL    ++  D ++GGY V   ++ ++  + L  +P  +               S+     + + Y+PF  G R+C
Sbjct:  292 SKNKRKAFLDLLLSVTDEEGNRLSQEDIREEVDTFMFEGHDTTAAAINWSLYLLGTNPEVQRKVDQELDEVFGRSHRPVTLEDLKKLKYLDCVIKETLRVFPSVPLFARSLS-EDCEVGGYKVTKGTEAIIIPYALHRDPRYFPDPEEFRPERFFPENSQ---GRHPYAYVPFSAGPRNC 467          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP2R1_MOUSE (Vitamin D 25-hydroxylase OS=Mus musculus GN=Cyp2r1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.289e-13
Identity = 49/201 (24.38%), Postives = 89/201 (44.28%), Query Frame = -2
Query:  182 IDHILDAQTKGE------INEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANG---NDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFEL 757
            +D  LD   +G+       +++N+++ V  + +A  ETT   + W I  +  +P IQ ++  E+D ++G   + +     K+PY +AV+ E LR    +PL + H    DA + GY +P  + ++ N + +  +   WK                +++NG        +PF +GRR C                L+Q F L
Sbjct:  277 VDAYLDEMDQGQNDPLSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVHKEIDLIVGHNRRPSWEYKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWKDPDMFYPERF------LDSNGYFTKKEALIPFSLGRRHCLGEQLARMEMFLFFTSLLQQFHL 471          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP2E1_RABIT (Cytochrome P450 2E1 OS=Oryctolagus cuniculus GN=CYP2E1 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 6.907e-13
Identity = 58/220 (26.36%), Postives = 95/220 (43.18%), Query Frame = -2
Query:  152 KSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINV-------AAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKID 790
            KS+     +  ID +L    K + +    LY +ENI V       A  ETT  ++ +G+  L+ HPEI++KL  E+D V+GP    +  D  ++PY+ AV+ E  R    +P  +PH    D    GY +P  + ++     L  +  ++              E K +   +D+ + PF  G+R C                ++Q+F L P      ID
Sbjct:  255 KSLDPSCPRDFIDSLLIEMEKDK-HSTEPLYTLENIAVTVADMFFAGTETTSTTLRYGLLILLKHPEIEEKLHEEIDRVIGPSRMPSVRDRVQMPYMDAVVHEIQRFIDLVPSNLPHEATRDTTFQGYVIPKGTVVIPTLDSLLYDKQEFPDPEKFKPEHFLNEEGKFKY--SDY-FKPFSAGKRVCVGEGLARMELFLLLSAILQHFNLKPLVDPEDID 470          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP2D1_RAT (Cytochrome P450 2D1 OS=Rattus norvegicus GN=Cyp2d1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.907e-13
Identity = 45/197 (22.84%), Postives = 88/197 (44.67%), Query Frame = -2
Query:  149 KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFR---YLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKIDT 730
            +   N++N+  +V ++  A + TT  ++ W +  ++ +P++Q++++ E+D V+G        D   +PY  AVI E  R     PL +P     D ++  + +P  + +++N   +  +   W+K               ++A GN  +   ++PF  GRR+C                L+Q F    P GQ +  T
Sbjct:  290 ESSFNDENLRMVVVDLFTAGMVTTATTLTWALLLMILYPDVQRRVQQEIDEVIGQVRCPEMTDQAHMPYTNAVIHEVQRFGDIAPLNLPRFTSCDIEVQDFVIPKGTTLIINLSSVLKDETVWEKPHRFHPEHF------LDAQGNFVKHEAFMPFSAGRRACLGEPLARMELFLFFTCLLQRFSFSVPVGQPRPST 480          
The following BLAST results are available for this feature:
BLAST of CB294024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 341
Match NameE-valueIdentityDescription
CP2DA_RAT1.818e-1322.60Cytochrome P450 2D10 OS=Rattus norvegicus GN=Cyp2d... [more]
CP24A_MOUSE1.818e-1326.791,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho... [more]
C71AS_ARATH1.818e-1327.11Putative cytochrome P450 71A28 OS=Arabidopsis thal... [more]
C516A_DICDI2.374e-1324.87Probable cytochrome P450 516A1 OS=Dictyostelium di... [more]
CP27B_RAT3.101e-1325.4525-hydroxyvitamin D-1 alpha hydroxylase, mitochond... [more]
CP2L1_PANAR4.050e-1324.12Cytochrome P450 2L1 OS=Panulirus argus GN=CYP2L1 P... [more]
CP4V3_MOUSE5.289e-1327.22Cytochrome P450 4V3 OS=Mus musculus GN=Cyp4v3 PE=1... [more]
CP2R1_MOUSE5.289e-1324.38Vitamin D 25-hydroxylase OS=Mus musculus GN=Cyp2r1... [more]
CP2E1_RABIT6.907e-1326.36Cytochrome P450 2E1 OS=Oryctolagus cuniculus GN=CY... [more]
CP2D1_RAT6.907e-1322.84Cytochrome P450 2D1 OS=Rattus norvegicus GN=Cyp2d1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01aa07_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01aa07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB294024 ID=CB294024; Name=CB294024; organism=Citrus sinensis; type=EST; length=821bp
TGAACCGACTTAGAAAAAACCATTCAACCACTATGAAACAGTCTTAACAT
TACAACCAAATGGAATTGTGAAACTAGAATGATCTAGGCTTGGCAACAAT
GGTCCAGTGCTTCAAAATGTGCAAACTGAACTGCCCACCTTTCTCTGCAG
TGTCAATCTTAGATTGACCTGGAGGAGGCAAGAGCTCAAAGTTCTGTACC
AAACGCCCAATAGTGATACCAAGAATTGGCAAAGCAAGGATAATTCCAGG
GCAGCTTCTTCTTCCAACACCGAAAGGAAGGTAACGGAAGTCATTTCCAT
TAGCCTCAACCTTGGACTCCTCCTCCAAAAACCTCTCAGGCCTGAATTCT
TCAGGTTTCTTCCATTGGGCGGGATTGTTGGCGAGCCACCACGCGTTCAC
TAGGATTTTGCTCTCAGCAGGGACGTCGTAGCCTCCAAGCTTGGCGTCGT
GAAGGTTCATGTGCGGGACAAGAAGAGGAATTGCCATCCTAAGGCGAAGA
GTTTCCTTGATCACGGCCTGAAGGTAGGGTAGTTTGTGGGTGTCAGGCTC
AGTGATTTGATGACCAGGACCAAGCACGGTGTCAAGTTCATTGCGGAGCT
TCTTCTGGATTTCAGGATGATTCACTAGCTCTGCAATTCCCCACTCGATC
GACCAAAGAGTTGTCTCGATTGCGGCAACATTGATGTTCTCAACGATGTA
TAGAACGTTGTCCTCGTTGATTTCTCCCTTTGTCTGAGCGTCCAAAATAT
GATCGATTGCGCATTTCAAGCTTTCATTACTCATGCTCTTCGTGCTTGCC
AATTTCTTTCTCTCCTCAACA
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