CB294024

Overview
NameCB294024
Unique NameCB294024
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP2B5_RABIT (Cytochrome P450 2B5 OS=Oryctolagus cuniculus GN=CYP2B5 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.303e-11
Identity = 43/191 (22.51%), Postives = 82/191 (42.93%), Query Frame = -2
Query:  152 EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKID 724
            E +  N++  V  +  A  ETT  ++ +G   ++ +P + ++++ E++ V+G        D  K+PY  AVI E  RL   +P   PHM   D +  GY +P  +++        ++P  ++             +  ++ N     ++PF +G+R C                ++QNF +  P     ID
Sbjct:  282 EFHHRNLILTVLTLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLVPFGAPHMVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDADGALKRNEG---FMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDID 469          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP27A_RABIT (Sterol 26-hydroxylase, mitochondrial OS=Oryctolagus cuniculus GN=CYP27A1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.303e-11
Identity = 47/199 (23.62%), Postives = 89/199 (44.72%), Query Frame = -2
Query:  140 TKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXES-KVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKIDTAEK 733
            T G+++    L  +  + +A ++TT  ++ W +  L  +PEIQ  LR E+  V+  G      D   +P L+AV+KETLRL   IP     +   + ++GG+  P  ++ +   +  + +P+ + +               +     + F  +PFG G R+C               RL+Q +EL+  P   ++ +  +
Sbjct:  319 TSGQLSPREALGSLPELLLAGVDTTSNTLTWALYHLSKNPEIQAALRKEVVGVVAAGQVPQHKDFAHMPLLKAVLKETLRLYPVIPANSRIIVDKEIEVGGFLFPKNTQFVFCHYVTSRDPSTFSEPDTFWPYRWLRKGQPETSKTQHPFGSVPFGYGVRACLGRRIAELEMQLLLARLIQRYELMLAPETGEVQSVAR 517          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: C515B_DICDI (Probable cytochrome P450 515B1 OS=Dictyostelium discoideum GN=cyp515b1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.303e-11
Identity = 46/151 (30.46%), Postives = 76/151 (50.33%), Query Frame = -2
Query:  377 MSNESLKCAIDHIL---DAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNEL--DTVLGPGHQITEPDT----------HKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLAN 784
            +  ++ KC ID+++    +     I  D + YIV ++ V   ++T  ++EW I  L NH  IQ+KL NE+  +T        TE D           +  P   A +KETLR    +PL +PH+   D ++GGY +P  ++I+ N +  +N
Sbjct:  254 LDQDNPKCFIDYLILQIRSDPSQTIKIDAIQYIVLDLLVGGTDSTSSALEWMILFLSNHESIQEKLYNEICKNTNTNTTATTTENDNESYFPKLIEKNNYPLFNACVKETLRRSPPVPLGLPHLCSEDTEIGGYLIPKGTQIISNIYSASN 404          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP3A7_HUMAN (Cytochrome P450 3A7 OS=Homo sapiens GN=CYP3A7 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.701e-11
Identity = 46/167 (27.54%), Postives = 78/167 (46.71%), Query Frame = -2
Query:  176 AAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLP 676
            A  ETT   + + I EL  HP++Q+K++ E+DTVL      T     +L YL  V+ ETLRL   + + +  +   D ++ G  +P    +++ ++ L ++P  W++              K + N + + Y PFG G R+C               R++QNF   P
Sbjct:  305 AGYETTSSVLSFIIYELATHPDVQQKVQKEIDTVLPNKAPPTYDTVLQLEYLDMVVNETLRL-FPVAMRLERVCKKDVEINGMFIPKGVVVMIPSYVLHHDPKYWRE---PEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALVNMKLALVRVLQNFSFKP 467          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP2CS_MESAU (Cytochrome P450 2C28 OS=Mesocricetus auratus GN=CYP2C28 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.701e-11
Identity = 47/203 (23.15%), Postives = 88/203 (43.35%), Query Frame = -2
Query:  128 EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGN----DFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKIDTAEKGGQF 724
            E   ++++  V ++ VA  ETT  ++ +G+  L+ H E+  K++ E+D V+G        D  ++PY  A++ E  R    IP  VPH    + K   Y +P  + ++ +   + ++  ++                 ++ NGN    D+ ++PF +G+R C                ++QNF+L        IDT      F
Sbjct:  281 EFTTESLMATVADVFVAGSETTSTTLRYGLLLLLKHKEVTAKVQKEIDHVIGRDRSPCMQDRTRMPYTDAMVHEVQRYVNLIPNNVPHAATCNVKFRNYVIPKGTDLITSLTSVLHDDKEFPNPKIFDPAHF------LDENGNFKKSDY-FMPFSIGKRMCMGEALARMELFLLLTTILQNFDLKSLADTKDIDTTPVASTF 476          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP2AD_HUMAN (Cytochrome P450 2A13 OS=Homo sapiens GN=CYP2A13 PE=1 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.701e-11
Identity = 54/242 (22.31%), Postives = 100/242 (41.32%), Query Frame = -2
Query:   83 KSMSNESLKCAIDHILDAQTKGEINEDNVLYIVE------NINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHWTIVAKPR 790
            +++   S +  ID  L    + E N +   Y+        N+  A  ET   ++ +G   L+ HPE++ K+  E+D V+G   Q    D  K+PY +AVI E  R    +P+ + H    D K   + +P  +++      +  +P  +              + + + +     ++PF +G+R C                ++QNF    P     ID + K   F+  I +++T+   PR
Sbjct:  257 RTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYTEAVIHEIQRFGDMLPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKKGQFKKSD---AFVPFSIGKRYCFGEGLARMELFLFFTTIMQNFRFKSPQSPKDIDVSPKHVGFAT-IPRNYTMSFLPR 494          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP2A6_HUMAN (Cytochrome P450 2A6 OS=Homo sapiens GN=CYP2A6 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.701e-11
Identity = 53/242 (21.90%), Postives = 102/242 (42.15%), Query Frame = -2
Query:   83 KSMSNESLKCAIDHILDAQTKGEINEDNVLYIVE------NINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHWTIVAKPR 790
            +++   S +  ID  L    + E N +   Y+        N+ +   ET   ++ +G   L+ HPE++ K+  E+D V+G   Q    D  K+PY++AVI E  R    IP+ +      D K   + +P  +++      +  +P+ +              + + + +     ++PF +G+R+C                ++QNF L        ID + K   F+  I +++T+   PR
Sbjct:  257 RTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD---AFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFAT-IPRNYTMSFLPR 494          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP4X1_HUMAN (Cytochrome P450 4X1 OS=Homo sapiens GN=CYP4X1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.222e-11
Identity = 55/223 (24.66%), Postives = 91/223 (40.81%), Query Frame = -2
Query:  170 VEERKKLASTKSMSNESLKCAIDHILDA------QTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPP 820
            ++ERKK        + + K      LD       ++    ++ +V   V    +A  +T   SI W +  L  +PE Q++ R E+  +LG G  IT     ++ Y    IKET RL  A+P +   ++       G  +PA   ++++ W L +NPA WK              S      + + YLPF  G R+C                ++ +F + P P
Sbjct:  262 IQERKKSLQAGVKQDNTPKRKYQDFLDIVLSAKDESGSSFSDIDVHSEVSTFLLAGHDTLAASISWILYCLALNPEHQERCREEVRGILGDGSSITWDQLGEMSYTTMCIKETCRLIPAVPSISRDLSKPLTFPDGCTLPAGITVVLSIWGLHHNPAVWKNPKVFDPLRFSQENSD---QRHPYAYLPFSAGSRNCIGQEFAMIELKVTIALILLHFRVTPDP 481          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP3AS_BOVIN (Cytochrome P450 3A28 OS=Bos taurus GN=CYP3A28 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.222e-11
Identity = 54/198 (27.27%), Postives = 87/198 (43.94%), Query Frame = -2
Query:  176 ILDAQTKGEINEDNVLYIVENINVAAI------ETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANG-NDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLP 748
            ++++Q   EI+    L  +E +  + I      ETT  ++ + I EL  HP +Q+KL+ E+D         T     ++ YL  V+ ETLR+   I   +  +   D ++ G  +P  + +LV  + L NNP  W +             SK   +  N + YLPFG G R+C               R++QNF   P
Sbjct:  275 MINSQNSKEIDNHKALSDIELVAQSTIFIFGGYETTSSTLSFIIYELTTHPHVQQKLQEEIDATFPNKAPPTYDALVQMEYLDMVVNETLRM-FPIAGRLERVCKKDVEIHGVTIPKGTTVLVPLFVLHNNPELWPE----PEEFRPERFSKNNKDSINPYVYLPFGTGPRNCLGMRFAIMNIKLALVRILQNFSFKP 467          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP3AB_MOUSE (Cytochrome P450 3A11 OS=Mus musculus GN=Cyp3a11 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.222e-11
Identity = 55/203 (27.09%), Postives = 91/203 (44.83%), Query Frame = -2
Query:  176 SNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGND-FRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLP 781
            S+ + K  + H   A +  EI   ++++I      A  ETT  ++ + +  L  HP+IQKKL++E+D  L      T     ++ YL  V+ ETLRL   I   +  +   D +L G  +P  S +++ ++ L ++P  W +             SK      D + YLPFG G R+C               +++QNF   P
Sbjct:  278 SHNNSKDKVSH--KALSDMEITAQSIIFIF-----AGYETTSSTLSFTLHSLATHPDIQKKLQDEIDEALPNKAPPTYDTVMEMEYLDMVLNETLRL-YPIANRLERVCKKDVELNGVYIPKGSTVMIPSYALHHDPQHWSE----PEEFQPERFSKENKGSIDPYVYLPFGNGPRNCLGMRFALMNMKLALTKIMQNFSFQP 468          
The following BLAST results are available for this feature:
BLAST of CB294024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 341
Match NameE-valueIdentityDescription
CP2B5_RABIT1.303e-1122.51Cytochrome P450 2B5 OS=Oryctolagus cuniculus GN=CY... [more]
CP27A_RABIT1.303e-1123.62Sterol 26-hydroxylase, mitochondrial OS=Oryctolagu... [more]
C515B_DICDI1.303e-1130.46Probable cytochrome P450 515B1 OS=Dictyostelium di... [more]
CP3A7_HUMAN1.701e-1127.54Cytochrome P450 3A7 OS=Homo sapiens GN=CYP3A7 PE=1... [more]
CP2CS_MESAU1.701e-1123.15Cytochrome P450 2C28 OS=Mesocricetus auratus GN=CY... [more]
CP2AD_HUMAN1.701e-1122.31Cytochrome P450 2A13 OS=Homo sapiens GN=CYP2A13 PE... [more]
CP2A6_HUMAN1.701e-1121.90Cytochrome P450 2A6 OS=Homo sapiens GN=CYP2A6 PE=1... [more]
CP4X1_HUMAN2.222e-1124.66Cytochrome P450 4X1 OS=Homo sapiens GN=CYP4X1 PE=2... [more]
CP3AS_BOVIN2.222e-1127.27Cytochrome P450 3A28 OS=Bos taurus GN=CYP3A28 PE=2... [more]
CP3AB_MOUSE2.222e-1127.09Cytochrome P450 3A11 OS=Mus musculus GN=Cyp3a11 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01aa07_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01aa07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB294024 ID=CB294024; Name=CB294024; organism=Citrus sinensis; type=EST; length=821bp
TGAACCGACTTAGAAAAAACCATTCAACCACTATGAAACAGTCTTAACAT
TACAACCAAATGGAATTGTGAAACTAGAATGATCTAGGCTTGGCAACAAT
GGTCCAGTGCTTCAAAATGTGCAAACTGAACTGCCCACCTTTCTCTGCAG
TGTCAATCTTAGATTGACCTGGAGGAGGCAAGAGCTCAAAGTTCTGTACC
AAACGCCCAATAGTGATACCAAGAATTGGCAAAGCAAGGATAATTCCAGG
GCAGCTTCTTCTTCCAACACCGAAAGGAAGGTAACGGAAGTCATTTCCAT
TAGCCTCAACCTTGGACTCCTCCTCCAAAAACCTCTCAGGCCTGAATTCT
TCAGGTTTCTTCCATTGGGCGGGATTGTTGGCGAGCCACCACGCGTTCAC
TAGGATTTTGCTCTCAGCAGGGACGTCGTAGCCTCCAAGCTTGGCGTCGT
GAAGGTTCATGTGCGGGACAAGAAGAGGAATTGCCATCCTAAGGCGAAGA
GTTTCCTTGATCACGGCCTGAAGGTAGGGTAGTTTGTGGGTGTCAGGCTC
AGTGATTTGATGACCAGGACCAAGCACGGTGTCAAGTTCATTGCGGAGCT
TCTTCTGGATTTCAGGATGATTCACTAGCTCTGCAATTCCCCACTCGATC
GACCAAAGAGTTGTCTCGATTGCGGCAACATTGATGTTCTCAACGATGTA
TAGAACGTTGTCCTCGTTGATTTCTCCCTTTGTCTGAGCGTCCAAAATAT
GATCGATTGCGCATTTCAAGCTTTCATTACTCATGCTCTTCGTGCTTGCC
AATTTCTTTCTCTCCTCAACA
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