CB294024

Overview
NameCB294024
Unique NameCB294024
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP2CU_RABIT (Cytochrome P450 2C30 OS=Oryctolagus cuniculus GN=CYP2C30 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.950e-11
Identity = 54/223 (24.22%), Postives = 101/223 (45.29%), Query Frame = -2
Query:  152 KSMSNESLKCAIDHILDAQTKGEINEDN------VLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGN----DFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKID 790
            +S+ + + +  ID++L    K + N+ +      +L  + ++  A  +TT  ++++G+  L+ HPEI  K++ E++ V+G        D   +PY  AVI E  R    +P  VPH    D +  GY +P  + IL +   +  +  ++                 ++A+GN    D+ +LPF +G+R+C                ++Q+F L P      ID
Sbjct:  252 ESLDHNNPRDFIDYLLIKMEKEKHNKQSQFTMHHLLVTIWDVFDAGSQTTSSTMQFGLLLLMKHPEIAAKVQEEIERVIGRDRSPCMQDRSCMPYTDAVIHEIQRYIDMVPNNVPHAVTQDIQFRGYLIPKGTHILPSLTSVLYDEKEFPNPEKFDPGHF------LDASGNFKKSDY-FLPFSIGKRACAGEGLARMELFLVLTTILQHFTLKPLVDPKDID 467          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP2CK_MACFA (Cytochrome P450 2C20 OS=Macaca fascicularis GN=CYP2C20 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.950e-11
Identity = 48/187 (25.67%), Postives = 82/187 (43.85%), Query Frame = -2
Query:  182 KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGN----DFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFEL 730
            + E   +N++  V ++ VA  ETT  ++ +G+  L+ HPE+  K++ E+D V+G        D   +PY  AVI E  R    +P  VPH    D K   Y +P  + I+     + ++  ++                 ++ NGN    D+ ++PF  G+R C                ++QNF L
Sbjct:  279 QSEFTIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDRSHMPYTDAVIHEIQRYIDLVPTGVPHAVTTDIKFRNYLIPKGTIIITLLTSVLHDDKEFPNPKIFDPGHF------LDENGNFKKSDY-FMPFSAGKRICAGEGLARMELFLFLTTILQNFNL 458          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP2AB_RABIT (Cytochrome P450 2A11 OS=Oryctolagus cuniculus GN=CYP2A11 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.950e-11
Identity = 50/216 (23.15%), Postives = 90/216 (41.67%), Query Frame = -2
Query:   83 KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHWTIVAKPR 730
            K E +  N++    N+  A  ET   ++ +G   L+ HP+++ K+  E+D V+G   Q    D  K+PY +AVI E  R    IP+ +      D K   + +P  +++      +  +P  + K            + + + +     ++PF VG+R C                ++QNF          ID + K   F+  I + +T+   PR
Sbjct:  283 KSEFHMKNLVLTTLNLFFAGTETVSTTMRYGFLLLMKHPDVEAKVHEEIDRVIGRNRQPKFEDRAKMPYTEAVIHEIQRFTDMIPMGLARRVTRDTKFRDFLLPKGTEVFPMLGSVLKDPKFFSKPREFYPQHFLDEKGQFKKSD---AFMPFSVGKRYCLGEGLARMELFLFFTTIMQNFRFRSQQAPQDIDVSPKHVGFAT-IPRTYTMSFVPR 494          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP27A_MOUSE (Sterol 26-hydroxylase, mitochondrial OS=Mus musculus GN=Cyp27a1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.950e-11
Identity = 48/184 (26.09%), Postives = 84/184 (45.65%), Query Frame = -2
Query:  140 VAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANG----NDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKIDTAEK 679
            +A ++TT  ++ W +  L   PEIQ+ L  E+  V+  G      D   +P L+AVIKETLRL   +P     +   + ++ G+  P  ++ ++  + ++ +P+ + +              K EA+     + F  +PFG G RSC               RLVQ +E+   PG  ++ T  +
Sbjct:  336 LAGVDTTSNTLTWALYHLSKSPEIQEALHKEVTGVVPFGKVPQHKDFAHMPLLKAVIKETLRLYPVVPTNSRIITEKETEINGFLFPKNTQFVLCHYVVSRDPSVFPE---PNSFQPHRWLRKKEADNPGILHPFGSVPFGYGVRSCLGRRIAELEMQLMLSRLVQKYEIALAPGMGEVKTVSR 516          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP270_MOUSE (Cytochrome P450 2C70 OS=Mus musculus GN=Cyp2c70 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.950e-11
Identity = 45/194 (23.20%), Postives = 86/194 (44.33%), Query Frame = -2
Query:  149 KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKIDT 730
            K E   DN++  + ++  A  ETT  ++++G+  L+ +PE+  K++ E+  V+G   + T  D + +PY  AV+ E  R    +P+  P     D +  GY +P  + ++     + N+  ++              + K     +D+ ++ F  GRR+C                ++Q+F L P      IDT
Sbjct:  278 KSEFTMDNLVVSIGDLFGAGTETTSSTVKYGLLLLLKYPEVTAKIQEEIAHVIGRHRRPTMQDRNHMPYTDAVLHEIQRYIDFVPIPSPRKTTQDVEFRGYHIPKGTSVMACLTSVLNDDKEFPN--PEKFDPGHFLDEKGNFKKSDY-FVAFSAGRRACIGEGLARMEMFLILTNILQHFTLKPLVKPEDIDT 468          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: C515A_DICDI (Probable cytochrome P450 515A1 OS=Dictyostelium discoideum GN=cyp515a1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.950e-11
Identity = 43/143 (30.07%), Postives = 74/143 (51.75%), Query Frame = -2
Query:  389 KKLASTKSMSNESLKCAIDHILDA---QTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAW 808
            K ++      NE  KC +++ +      T   I   ++ YI  +I VA I TT  +++W +  L N+P IQ+KL  E++T   P H+    D  + PYL ++IKETLR+    P  +PH+   D  +    +P  ++++ N +
Sbjct:  263 KNISDDDDDGNEP-KCFLEYFISEIRKDTSNLIKITDLPYICFDIIVAGIVTTSTTMDWMLLYLTNYPNIQEKLFFEINTPNHPLHK----DKLQFPYLNSIIKETLRISPPAPFALPHICTDDIVIDDIFIPKNTQVIPNIY 400          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP4C3_DROME (Cytochrome P450 4c3 OS=Drosophila melanogaster GN=Cyp4c3 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.465e-11
Identity = 49/173 (28.32%), Postives = 84/173 (48.55%), Query Frame = -2
Query:  251 IDHILDAQTKGEI--NEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQ--ITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 757
            +D ++DA  +G +  NED +   V+       +TT  +I W +  L  HPE Q+++  ELD++ G   +   T  +   + YL+  IK++LRL  ++P++   M   D  +GG  VPA ++ ++  + L  NP  + K                 A  + F Y+PF  G R+C
Sbjct:  314 LDLLIDASKEGTVLSNED-IREEVDTFMFEGHDTTSAAISWTLFLLGCHPEYQERVVEELDSIFGDDKETPATMKNLMDMRYLECCIKDSLRLFPSVPMMA-RMVGEDVNIGGKIVPAGTQAIIMTYALHRNPRVFPKPEQFNPDNFLPENC---AGRHPFAYIPFSAGPRNC 481          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP2S1_MOUSE (Cytochrome P450 2S1 OS=Mus musculus GN=Cyp2s1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.465e-11
Identity = 48/198 (24.24%), Postives = 86/198 (43.43%), Query Frame = -2
Query:  137 EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLP--PPGQSKIDTAEKG 724
            E  E N+L  V  +  A   T   +I + +  L+ +P++Q+++R EL   LGPG   +  D  +LPY  AV+ E  RL   +P+ +PH         GY +P  +++      + ++PA ++             + ++  +     +LP+ +G+R C                ++Q F L    PPG   +  A  G
Sbjct:  287 EFTEKNLLMTVTYLLFAGTMTIGATIRYALLLLLRYPQVQQRVREELIQELGPGRAPSLSDRVRLPYTDAVLHEAQRLLALVPMGMPHTITRTTCFRGYTLPKGTEVFPLIGSILHDPAVFQNPGEFHPGRFLDEDGRLRKHE---AFLPYSLGKRVCLGEGLARAELWLFFTSILQAFSLETPCPPGDLSLKPAISG 481          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP2E1_MESAU (Cytochrome P450 2E1 OS=Mesocricetus auratus GN=CYP2E1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.465e-11
Identity = 36/115 (31.30%), Postives = 60/115 (52.17%), Query Frame = -2
Query:  401 EINEDNVLYIVENINV-------AAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKIL 724
            E +    +Y +ENI+V       A  ETT  ++ +G+  L+ +PE+++KL  E+D V+GP       D  ++PY+ AV+ E  R    IP  +PH    D    GY +P  + ++
Sbjct:  276 EKDSQEPMYTMENISVTLADLFFAGTETTSTTLRYGLLILMKYPEVEEKLHEEIDRVIGPSRVPVFKDRLEMPYMDAVVHEIQRFISLIPSNLPHEATRDTMFRGYVIPKGTVVI 390          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP2E1_HUMAN (Cytochrome P450 2E1 OS=Homo sapiens GN=CYP2E1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.465e-11
Identity = 45/187 (24.06%), Postives = 80/187 (42.78%), Query Frame = -2
Query:  152 DNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKID 712
            D +   V ++  A  ETT  ++ +G+  L+ +PEI++KL  E+D V+GP       D  ++PY+ AV+ E  R    +P  +PH    D    GY +P  + ++     +  +  ++                K +   +D+ + PF  G+R C                ++Q+F L P      ID
Sbjct:  287 DGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKY--SDY-FKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDID 470          
The following BLAST results are available for this feature:
BLAST of CB294024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 341
Match NameE-valueIdentityDescription
CP2CU_RABIT4.950e-1124.22Cytochrome P450 2C30 OS=Oryctolagus cuniculus GN=C... [more]
CP2CK_MACFA4.950e-1125.67Cytochrome P450 2C20 OS=Macaca fascicularis GN=CYP... [more]
CP2AB_RABIT4.950e-1123.15Cytochrome P450 2A11 OS=Oryctolagus cuniculus GN=C... [more]
CP27A_MOUSE4.950e-1126.09Sterol 26-hydroxylase, mitochondrial OS=Mus muscul... [more]
CP270_MOUSE4.950e-1123.20Cytochrome P450 2C70 OS=Mus musculus GN=Cyp2c70 PE... [more]
C515A_DICDI4.950e-1130.07Probable cytochrome P450 515A1 OS=Dictyostelium di... [more]
CP4C3_DROME6.465e-1128.32Cytochrome P450 4c3 OS=Drosophila melanogaster GN=... [more]
CP2S1_MOUSE6.465e-1124.24Cytochrome P450 2S1 OS=Mus musculus GN=Cyp2s1 PE=2... [more]
CP2E1_MESAU6.465e-1131.30Cytochrome P450 2E1 OS=Mesocricetus auratus GN=CYP... [more]
CP2E1_HUMAN6.465e-1124.06Cytochrome P450 2E1 OS=Homo sapiens GN=CYP2E1 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01aa07_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01aa07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB294024 ID=CB294024; Name=CB294024; organism=Citrus sinensis; type=EST; length=821bp
TGAACCGACTTAGAAAAAACCATTCAACCACTATGAAACAGTCTTAACAT
TACAACCAAATGGAATTGTGAAACTAGAATGATCTAGGCTTGGCAACAAT
GGTCCAGTGCTTCAAAATGTGCAAACTGAACTGCCCACCTTTCTCTGCAG
TGTCAATCTTAGATTGACCTGGAGGAGGCAAGAGCTCAAAGTTCTGTACC
AAACGCCCAATAGTGATACCAAGAATTGGCAAAGCAAGGATAATTCCAGG
GCAGCTTCTTCTTCCAACACCGAAAGGAAGGTAACGGAAGTCATTTCCAT
TAGCCTCAACCTTGGACTCCTCCTCCAAAAACCTCTCAGGCCTGAATTCT
TCAGGTTTCTTCCATTGGGCGGGATTGTTGGCGAGCCACCACGCGTTCAC
TAGGATTTTGCTCTCAGCAGGGACGTCGTAGCCTCCAAGCTTGGCGTCGT
GAAGGTTCATGTGCGGGACAAGAAGAGGAATTGCCATCCTAAGGCGAAGA
GTTTCCTTGATCACGGCCTGAAGGTAGGGTAGTTTGTGGGTGTCAGGCTC
AGTGATTTGATGACCAGGACCAAGCACGGTGTCAAGTTCATTGCGGAGCT
TCTTCTGGATTTCAGGATGATTCACTAGCTCTGCAATTCCCCACTCGATC
GACCAAAGAGTTGTCTCGATTGCGGCAACATTGATGTTCTCAACGATGTA
TAGAACGTTGTCCTCGTTGATTTCTCCCTTTGTCTGAGCGTCCAAAATAT
GATCGATTGCGCATTTCAAGCTTTCATTACTCATGCTCTTCGTGCTTGCC
AATTTCTTTCTCTCCTCAACA
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