CB294024

Overview
NameCB294024
Unique NameCB294024
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1684 contig Csv1_Contig1684:818..1638. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP2BC_RAT (Cytochrome P450 2B12 OS=Rattus norvegicus GN=Cyp2b12 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.465e-11
Identity = 48/194 (24.74%), Postives = 81/194 (41.75%), Query Frame = -2
Query:  152 EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANG---NDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKID 724
            E N  N++  V ++  A  ETT  ++      ++ +P + +K++ E+D V+G     T  D  K+PY  AVI E  R     P+ +PH    D    GY +P  +++        ++P  +++               ++ANG       +LPF  G+R C                ++QNF L  P     ID
Sbjct:  283 EFNHQNLVISVLSLFFAGTETTSTTLRCTFLIMLKYPHVAEKVQKEIDQVIGSHRLPTPDDRTKMPYTDAVIHEIQRFADLTPIGLPHRVTKDTVFRGYLLPKNTEVYPILSSALHDPRYFEQPDTFNPEHF------LDANGALKKSEAFLPFSTGKRICLGEGIARNELFIFFTAILQNFTLASPVAPEDID 470          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: ORDA_ASPPA (O-methylsterigmatocystin oxidoreductase OS=Aspergillus parasiticus GN=ordA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.444e-11
Identity = 41/140 (29.29%), Postives = 64/140 (45.71%), Query Frame = -2
Query:  248 ETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCP 667
            +TT+ ++      +  +PE+Q + R ELD V+GP    T     +LP++ A++KE  R   A PL  PH+   D    GY +P  + +L N W   ++P+ +              +S       D     FG GRR CP
Sbjct:  304 DTTVSAVSSFFVAMALYPEVQHQAREELDRVVGPTTLATFEHRSQLPFIDALVKEVFRWHPASPLGAPHITQEDQIWDGYLLPKGALLLPNIWTFTHDPSVYHDPMVFKPERFLERQSSPPE--TDPMKFVFGFGRRICP 441          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP4V2_HUMAN (Cytochrome P450 4V2 OS=Homo sapiens GN=CYP4V2 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.444e-11
Identity = 44/158 (27.85%), Postives = 79/158 (50.00%), Query Frame = -2
Query:  251 INEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQ-ITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 721
            ++ +++   V+       +TT  +I W +  L ++PE+QKK+ +ELD V G   +  T  D  KL YL+ VIKETLRL  ++PL    ++  D ++ GY V   ++ ++  + L  +P  +               ++     + + Y+PF  G R+C
Sbjct:  314 LSHEDIREEVDTFMFEGHDTTAAAINWSLYLLGSNPEVQKKVDHELDDVFGKSDRPATVEDLKKLRYLECVIKETLRLFPSVPLFARSVS-EDCEVAGYRVLKGTEAVIIPYALHRDPRYFPNPEEFQPERFFPENAQ---GRHPYAYVPFSAGPRNC 467          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP4CU_BLAGE (Cytochrome P450 4c21 OS=Blattella germanica GN=CYP4C21 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.444e-11
Identity = 53/196 (27.04%), Postives = 91/196 (46.43%), Query Frame = -2
Query:  251 EERKKLASTKSMSNESLKCA-----IDHILDA-QTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNEL-DTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 817
            EERKK   T++  +  +        +D +LDA +   ++ + ++L  V        +T   ++ W + EL +HPEIQ++   E+ D   G     T  D + + YL+ VIKE+LRL  ++   V   +  D +LGGY +PA + I  +  ++  NP  +                    N + + Y+PF  G R+C
Sbjct:  256 EERKKSKVTQTSEDADIGKKKRVPFLDTLLDASEDDNKLTDTDILEEVHTFMFEGHDTVSAAMTWLLFELGHHPEIQEEAYKEVQDIFQGSDRVPTMADLNNMNYLERVIKESLRLHPSVIYFVREAH-QDFELGGYTIPAGTNIDFSVPFIHRNPEIFPNPRCFNPDNFLPDR---VVNRHPYAYIPFSAGPRNC 447          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP4AA_RAT (Cytochrome P450 4A10 OS=Rattus norvegicus GN=Cyp4a10 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.444e-11
Identity = 44/166 (26.51%), Postives = 69/166 (41.57%), Query Frame = -2
Query:  170 ETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPP 667
            +TT   + W    L  HPE Q++ R E+ +VLG G  IT     ++PY    IKE LRL   +P +V  ++       G  +P   ++ ++ + L +NP  W                  ++  +   +LPF  G R+C                 +  FELLP P
Sbjct:  323 DTTASGVSWIFYALATHPEHQQRCREEVQSVLGDGSSITWDHLDQIPYTTMCIKEALRLYPPVPGIVRELSTSVTFPDGRSLPKGIQVTLSIYGLHHNPKVWPNPEVFDPSRFAP-----DSPRHSHSFLPFSGGARNCIGKQFAMSEMKVIVALTLLRFELLPDP 483          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP3A9_RAT (Cytochrome P450 3A9 OS=Rattus norvegicus GN=Cyp3a9 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.444e-11
Identity = 51/183 (27.87%), Postives = 82/183 (44.81%), Query Frame = -2
Query:  176 EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLP 724
            EI   +V++I      A  ETT  ++ + +  L  HP+IQKKL++E+D  L      T     ++ YL  V+ ETLRL   I   +  +   D ++ G  +P  + +++  + L  +P  W +              K + N N + YLPFG G R+C               R++QNF   P
Sbjct:  294 EIVAQSVIFIF-----AGYETTSSALSFVLYLLAIHPDIQKKLQDEIDAALPNKAHATYDTLLQMEYLDMVVNETLRL-YPIAGRLERVCKTDVEINGVFIPKGTVVMIPTFALHKDPHYWPE---PEEFRPERFSKKNQDNINPYMYLPFGNGPRNCIGMRFALMNMKVALFRVLQNFSFQP 467          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP3A6_RABIT (Cytochrome P450 3A6 OS=Oryctolagus cuniculus GN=CYP3A6 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.444e-11
Identity = 53/194 (27.32%), Postives = 93/194 (47.94%), Query Frame = -2
Query:  188 ILDAQTKGEINE----DNVLYIVENINV--AAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDT-HKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNF 748
            ++++Q   EI+     D++  + ++I +  A  ETT  ++ + +  L  HP++Q+KL+ E+DT+L P  ++   DT  K+ YL  V+ ETLRL   I   +  +   D  + G  +P  + +++  + L  +P  W +              K + N N + Y PFG G R+C               RL+QNF
Sbjct:  273 MINSQNSKEIDSHKALDDIEVVAQSIIILFAGYETTSSTLSFIMHLLATHPDVQQKLQEEIDTLL-PNKELATYDTLVKMEYLDMVVNETLRL-YPIAGRLERVCKKDVDINGTFIPKGTIVMMPTYALHRDPQHWTE---PDEFRPERFSKKNKDNINPYIYHPFGAGPRNCLGMRFALMNIKLALVRLMQNF 461          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP2E1_MOUSE (Cytochrome P450 2E1 OS=Mus musculus GN=Cyp2e1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.444e-11
Identity = 36/115 (31.30%), Postives = 59/115 (51.30%), Query Frame = -2
Query:  401 EINEDNVLYIVENINV-------AAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKIL 724
            E +    +Y +ENI+V       A  ETT  ++ +G+  L+ +PEI++KL  E+D V+GP       D   +PY+ AV+ E  R    +P  +PH    D    GY +P  + ++
Sbjct:  276 EKHSQEPMYTMENISVTLADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRAPAVRDRMNMPYMDAVVHEIQRFINLVPSNLPHEATRDTVFRGYVIPKGTVVI 390          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP2E1_CANFA (Cytochrome P450 2E1 OS=Canis familiaris GN=CYP2E1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.444e-11
Identity = 32/104 (30.77%), Postives = 57/104 (54.81%), Query Frame = -2
Query:  401 DNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKIL 712
            DN+   V ++  A  ETT  ++ +G+  L+ +PE+++KL  E+D V+GP       D  ++PY+ AV+ E  R    +P  +PH+   D    GY +P  + ++
Sbjct:  287 DNIAVTVADLFFAGTETTSTTLRYGLLILMKYPEVEEKLHEEIDRVIGPSRVPAIKDRLEMPYMDAVVHEIQRFIDLLPSNLPHVANQDTMFRGYVIPKGTVVI 390          
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: CP10_LYMST (Cytochrome P450 10 OS=Lymnaea stagnalis GN=CYP10 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.444e-11
Identity = 48/184 (26.09%), Postives = 85/184 (46.20%), Query Frame = -2
Query:  182 GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGH-QITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQW-KKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFEL 727
            G ++   V  ++ ++ +AA+ETT  +  W +  L  +P++Q+KL  E+       +  I+  D  KLP ++AV+KETLRL   I          D +LGGY +PA + +  N + +  +P+ + +              S+++A       L +G G R C               +++QNF L
Sbjct:  334 GSMSTKEVTGLIVDLMLAAVETTSSATVWCLYNLAKNPQVQEKLFQEITEAQAKNNGTISAEDLCKLPMVKAVVKETLRL-YPITYSTSRNIAEDMELGGYTIPAGTHVQANLYGMYRDPSLFPEPEGILPERWLRMNGSQMDATIKSTSQLVWGHGARMCLGRRIAEQEMHITLSKIIQNFTL 516          
The following BLAST results are available for this feature:
BLAST of CB294024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 341
Match NameE-valueIdentityDescription
CP2BC_RAT6.465e-1124.74Cytochrome P450 2B12 OS=Rattus norvegicus GN=Cyp2b... [more]
ORDA_ASPPA8.444e-1129.29O-methylsterigmatocystin oxidoreductase OS=Aspergi... [more]
CP4V2_HUMAN8.444e-1127.85Cytochrome P450 4V2 OS=Homo sapiens GN=CYP4V2 PE=1... [more]
CP4CU_BLAGE8.444e-1127.04Cytochrome P450 4c21 OS=Blattella germanica GN=CYP... [more]
CP4AA_RAT8.444e-1126.51Cytochrome P450 4A10 OS=Rattus norvegicus GN=Cyp4a... [more]
CP3A9_RAT8.444e-1127.87Cytochrome P450 3A9 OS=Rattus norvegicus GN=Cyp3a9... [more]
CP3A6_RABIT8.444e-1127.32Cytochrome P450 3A6 OS=Oryctolagus cuniculus GN=CY... [more]
CP2E1_MOUSE8.444e-1131.30Cytochrome P450 2E1 OS=Mus musculus GN=Cyp2e1 PE=1... [more]
CP2E1_CANFA8.444e-1130.77Cytochrome P450 2E1 OS=Canis familiaris GN=CYP2E1 ... [more]
CP10_LYMST8.444e-1126.09Cytochrome P450 10 OS=Lymnaea stagnalis GN=CYP10 P... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS01_01aa07_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01aa07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB294024 ID=CB294024; Name=CB294024; organism=Citrus sinensis; type=EST; length=821bp
TGAACCGACTTAGAAAAAACCATTCAACCACTATGAAACAGTCTTAACAT
TACAACCAAATGGAATTGTGAAACTAGAATGATCTAGGCTTGGCAACAAT
GGTCCAGTGCTTCAAAATGTGCAAACTGAACTGCCCACCTTTCTCTGCAG
TGTCAATCTTAGATTGACCTGGAGGAGGCAAGAGCTCAAAGTTCTGTACC
AAACGCCCAATAGTGATACCAAGAATTGGCAAAGCAAGGATAATTCCAGG
GCAGCTTCTTCTTCCAACACCGAAAGGAAGGTAACGGAAGTCATTTCCAT
TAGCCTCAACCTTGGACTCCTCCTCCAAAAACCTCTCAGGCCTGAATTCT
TCAGGTTTCTTCCATTGGGCGGGATTGTTGGCGAGCCACCACGCGTTCAC
TAGGATTTTGCTCTCAGCAGGGACGTCGTAGCCTCCAAGCTTGGCGTCGT
GAAGGTTCATGTGCGGGACAAGAAGAGGAATTGCCATCCTAAGGCGAAGA
GTTTCCTTGATCACGGCCTGAAGGTAGGGTAGTTTGTGGGTGTCAGGCTC
AGTGATTTGATGACCAGGACCAAGCACGGTGTCAAGTTCATTGCGGAGCT
TCTTCTGGATTTCAGGATGATTCACTAGCTCTGCAATTCCCCACTCGATC
GACCAAAGAGTTGTCTCGATTGCGGCAACATTGATGTTCTCAACGATGTA
TAGAACGTTGTCCTCGTTGATTTCTCCCTTTGTCTGAGCGTCCAAAATAT
GATCGATTGCGCATTTCAAGCTTTCATTACTCATGCTCTTCGTGCTTGCC
AATTTCTTTCTCTCCTCAACA
back to top