CB304394

Overview
NameCB304394
Unique NameCB304394
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length586
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13846 contig Csv1_Contig13846:1..560. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304394 vs. ExPASy Swiss-Prot
Match: HSP70_LEIAM (Heat shock 70 kDa protein OS=Leishmania amazonensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.632e-27
Identity = 65/137 (47.45%), Postives = 84/137 (61.31%), Query Frame = -3
Query:  192 EEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELECICNPIIAKMYQ--GGGADAGASMDE----DXXXXXXXXXXXPKIEEVD 584
            +EIE+MV +A KY+A+D     +VEAKN LENYAY+M+NT+ D  +S KL   DK  +   IE A++WL  NQ A  +E+E K KELE +CNPI+ KMYQ  GGGA   A M +                PK+EEVD
Sbjct:  516 DEIERMVNDAMKYEADDKAQADRVEAKNGLENYAYSMKNTLGDSNVSGKLDDTDKSTLNKEIEAALEWLSSNQEATKEEYEHKQKELENVCNPIMTKMYQSMGGGAGGMAGMPDMSSMSGARPAGGASSGPKVEEVD 652          
BLAST of CB304394 vs. ExPASy Swiss-Prot
Match: HSP72_PARBA (Heat shock 70 kDa protein 2 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-2 PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 3.438e-27
Identity = 56/108 (51.85%), Postives = 77/108 (71.30%), Query Frame = -3
Query:  261 EEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELECICNPIIAKMYQGGGADAGA 584
            EEIE+M+ EAEKYKAED+    ++ AKN LE+YAY++RNTI D K+  KL  +DK+K++  I++ + WLD NQ A  +EFE + KELE + NPI+ K Y G G + GA
Sbjct:  512 EEIERMLAEAEKYKAEDEAEASRISAKNGLESYAYSLRNTISDSKVDEKLDASDKEKLKTEIDKTVSWLDENQTATKEEFEAQQKELESVANPIMMKFY-GAGGEGGA 618          
BLAST of CB304394 vs. ExPASy Swiss-Prot
Match: HS7C2_DICDI (Heat shock cognate 70 kDa protein 2 OS=Dictyostelium discoideum GN=hspE-1 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.438e-27
Identity = 57/108 (52.78%), Postives = 82/108 (75.93%), Query Frame = -3
Query:  264 EEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELECICNPIIAKMY-QGGGADAG 584
            E+IEKMV++AE +KA+D+  ++ VE+KN LENYAY +R+TIKD+KI+AKL   D+K +E+  +EAI WL  N  A  +E+E  MK+LE +C+PII+K+Y Q GG + G
Sbjct:  512 EQIEKMVKDAEMFKAQDEAQREVVESKNKLENYAYTVRSTIKDDKIAAKLSKEDRKTVEEKSDEAINWLHANDSATKEEYEKAMKDLEAVCSPIISKVYGQQGGENPG 619          
BLAST of CB304394 vs. ExPASy Swiss-Prot
Match: HSP74_TRYBB (Heat shock 70 kDa protein 4 OS=Trypanosoma brucei brucei PE=2 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 4.490e-27
Identity = 56/112 (50.00%), Postives = 78/112 (69.64%), Query Frame = -3
Query:  249 EIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELECICNPIIAKMYQG-GGADAGASMDE 581
            +IE+MV +A KY+AED  H   ++AKN LENYA++M+NTI D  ++ KL  ADK  +  A+EEA++WL+ NQ A  +E+  + KELE +C PI++KMYQG GG D    M E
Sbjct:  517 DIERMVSDAAKYEAEDKAHVXXIDAKNGLENYAFSMKNTINDPNVAGKLDDADKNAVTTAVEEALRWLNDNQEASLEEYNHRQKELEGVCAPILSKMYQGMGGGDGPGGMPE 628          
BLAST of CB304394 vs. ExPASy Swiss-Prot
Match: HSP70_PLEWA (Heat shock 70 kDa protein OS=Pleurodeles waltlii GN=HSP70 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 5.864e-27
Identity = 55/112 (49.11%), Postives = 82/112 (73.21%), Query Frame = -3
Query:  258 EEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELECICNPIIAKMYQG---GGADAGAS 584
            EEIE+MVQEAE+YKA+D+  ++KV AKN LE+ A+NM++T++ + +  K+   D+KKI D   + I W++ NQ+AE +E+E + KELE +CN II K+YQG   GG  +G+S
Sbjct:  515 EEIERMVQEAERYKADDEAQREKVSAKNTLESIAFNMKSTVEGDNLKDKISEDDRKKIVDKCNQTISWMENNQMAEKEEYEHQQKELEKVCNSIITKLYQGGMPGGMPSGSS 626          
BLAST of CB304394 vs. ExPASy Swiss-Prot
Match: HSP70_THEAN (Heat shock 70 kDa protein OS=Theileria annulata GN=TA11610 PE=3 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.000e-26
Identity = 50/110 (45.45%), Postives = 80/110 (72.73%), Query Frame = -3
Query:  255 EEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELECICNPIIAKMYQGGGADAGASM 584
            EEI++MV+EAEKYK ED++ ++ VE+++ LENY Y+M+NT+ ++++  KL   +       I +A++W++ NQLAE DE+EDK+K +E +CNP++ K+YQ G A  G  M
Sbjct:  514 EEIDRMVEEAEKYKEEDEKRRRCVESRHKLENYCYSMKNTLSEDQVKQKLGADEVDSALSTITDALKWVEANQLAEHDEYEDKLKHVEGVCNPLVTKLYQSGAAPGGPDM 623          
BLAST of CB304394 vs. ExPASy Swiss-Prot
Match: HSP7D_DROME (Heat shock 70 kDa protein cognate 4 OS=Drosophila melanogaster GN=Hsc70-4 PE=1 SV=3)

HSP 1 Score: 119.398 bits (298), Expect = 1.306e-26
Identity = 52/107 (48.60%), Postives = 76/107 (71.03%), Query Frame = -3
Query:  264 EEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELECICNPIIAKMYQGGGADAG 584
            E+IE+MV EAEKY+ ED++ K+ + AKN LE+Y +NM+ T+ ++ +  K+  +D+  I D   E I+WLD NQLA+ +E+E + KELE +CNPII K+YQG G   G
Sbjct:  513 EDIERMVNEAEKYRNEDEKQKETIAAKNGLESYCFNMKATLDEDNLKTKISDSDRTTILDKCNETIKWLDANQLADKEEYEHRQKELEGVCNPIITKLYQGAGFPPG 619          
BLAST of CB304394 vs. ExPASy Swiss-Prot
Match: HSP70_TRYCR (Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.306e-26
Identity = 55/109 (50.46%), Postives = 79/109 (72.48%), Query Frame = -3
Query:  255 EIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELECICNPIIAKMYQGGGADAGASM 581
            EIE+MV+EA KY+AED +  ++++AKN LENYA++M+N + D  ++ K+  ADKK I  A+EEA++WL+ NQ A  +E+E + KELE +C PI+  MYQG    AGA M
Sbjct:  517 EIERMVREAAKYEAEDKDQVRQIDAKNGLENYAFSMKNAVNDPNVAGKIEEADKKTITSAVEEALEWLNNNQEASKEEYEHRQKELENLCTPIMTNMYQG---MAGAGM 622          
BLAST of CB304394 vs. ExPASy Swiss-Prot
Match: BIP1_ARATH (Luminal-binding protein 1 OS=Arabidopsis thaliana GN=At5g28540 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.306e-26
Identity = 56/110 (50.91%), Postives = 85/110 (77.27%), Query Frame = -3
Query:  261 EEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKD-EKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELECICNPIIAKMYQ-GGGADAGA 584
            EEI++MV+EAE++  ED + K+K++A+NALE Y YNM+N + D +K++ KL   +K+KIE A +EA++WLD NQ +E +E+++K+KE+E +CNPII  +YQ  GGA  GA
Sbjct:  544 EEIDRMVKEAEEFAEEDKKVKEKIDARNALETYVYNMKNQVNDKDKLADKLEGDEKEKIEAATKEALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVYQRSGGAPGGA 653          
BLAST of CB304394 vs. ExPASy Swiss-Prot
Match: HSP70_TRIRU (Heat shock 70 kDa protein OS=Trichophyton rubrum GN=HSP70 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.228e-26
Identity = 54/108 (50.00%), Postives = 77/108 (71.30%), Query Frame = -3
Query:  261 EEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELECICNPIIAKMYQGGGADAGA 584
            EEIE+M+ EAEKYKAED+    ++ AKN LE+YAY+++NT+ D K+  KL  ADK+K++  I++ + WLD NQ A  +E+E + KELE + NPI+ K Y G G + GA
Sbjct:  512 EEIERMLAEAEKYKAEDEAETARIGAKNGLESYAYSLKNTLSDSKVDEKLDAADKEKLKSEIDKVVAWLDDNQTATKEEYESQQKELEGVANPIMMKFY-GAGGEGGA 618          
The following BLAST results are available for this feature:
BLAST of CB304394 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 166
Match NameE-valueIdentityDescription
HSP70_LEIAM2.632e-2747.45Heat shock 70 kDa protein OS=Leishmania amazonensi... [more]
HSP72_PARBA3.438e-2751.85Heat shock 70 kDa protein 2 OS=Paracoccidioides br... [more]
HS7C2_DICDI3.438e-2752.78Heat shock cognate 70 kDa protein 2 OS=Dictyosteli... [more]
HSP74_TRYBB4.490e-2750.00Heat shock 70 kDa protein 4 OS=Trypanosoma brucei ... [more]
HSP70_PLEWA5.864e-2749.11Heat shock 70 kDa protein OS=Pleurodeles waltlii G... [more]
HSP70_THEAN1.000e-2645.45Heat shock 70 kDa protein OS=Theileria annulata GN... [more]
HSP7D_DROME1.306e-2648.60Heat shock 70 kDa protein cognate 4 OS=Drosophila ... [more]
HSP70_TRYCR1.306e-2650.46Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=... [more]
BIP1_ARATH1.306e-2650.91Luminal-binding protein 1 OS=Arabidopsis thaliana ... [more]
HSP70_TRIRU2.228e-2650.00Heat shock 70 kDa protein OS=Trichophyton rubrum G... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0001_IIIaR_B11 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0001_IIIaR_B11 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304394 ID=CB304394; Name=CB304394; organism=Citrus sinensis; type=EST; length=586bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTGAAGGAAAAATAAGACA
TTGCTTAAAAACATAATATCTTTATGCATACACCAGGAAACAGTATTTAC
ATGTAACAGAAGCAGGAAAAGGAAGAAAAGATCACACCCCCAACTCAACC
CCTAATCATTAAACAACATTAAGCATAAATCCTCAAATTTAATCCACCTC
CTCAATCTTGGGGCCAGCACCGCTACCAGCACCAGCAGAAGGACCATCCT
CATCCATACTTGCACCAGCATCAGCTCCACCTCCTTGGTACATCTTGGCA
ATAATTGGGTTGCAGATGCACTCCAGCTCTTTCATCTTATCTTCAAACTC
ATCTGCCTCTGCGAGCTGGTTCCCGTCAAGCCATTGGATGGCCTCCTCAA
TGGCATCTTCAATTTTCTTCTTGTCAGCAGTGGGAAGCTTTGCGCTGATC
TTTTCATCCTTGATTGTGTTTCTCATGTTGTAAGCATAATTCTCAAGAGC
ATTCTTGGCCTCCACCTTTTTCTTGTGCTCGTCATCCTCGGCCTTGTATT
TTTCTGCCTCTTGTACCATCTTCTCTATCTCCTCCT
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