CB304428
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304428 vs. ExPASy Swiss-Prot
Match: NLT42_HORVU (Non-specific lipid-transfer protein 4.2 OS=Hordeum vulgare GN=LTP4.2 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.905e-26 Identity = 54/114 (47.37%), Postives = 78/114 (68.42%), Query Frame = -1 Query: 252 AALKLVCASLLCILVTAPVTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 593 AA +LV +++ ++ AI+CGQV+ +L+PCI++ R G PP CC+GV+ L GAA++T D+QAAC C+K A G+NA AAG+P CGVS+PY IS + DCS++R Sbjct: 5 AATQLVLVAMVAAMLIVATDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSA---AGGLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CB304428 vs. ExPASy Swiss-Prot
Match: NLTP4_ORYSJ (Non-specific lipid-transfer protein 4 OS=Oryza sativa subsp. japonica GN=Os12g0114500 PE=3 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 6.405e-26 Identity = 53/104 (50.96%), Postives = 71/104 (68.27%), Query Frame = -1 Query: 255 LLCILVTAPVTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 566 ++ +L+ AP +A+TCGQV LAPCI + P CC+GVR+LN AA TT DRQ C CLKQ ++ G+ ++ AG+P +CGV+IPY ISP+TDCSRV Sbjct: 15 VVALLLAAPAASAVTCGQVVSMLAPCIMYATGRVSAPTGGCCDGVRTLNSAAATTADRQTTCACLKQQTSAMGGLRPDLVAGIPSKCGVNIPYAISPSTDCSRV 118
BLAST of CB304428 vs. ExPASy Swiss-Prot
Match: SCA_LILLO (Stigma/stylar cysteine-rich adhesin OS=Lilium longiflorum GN=SCA PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.427e-25 Identity = 58/115 (50.43%), Postives = 71/115 (61.74%), Query Frame = -1 Query: 252 MAALKLVCASLLCILVTAPVTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 596 MA VC LL + +AITCGQV L C+ + R GG PP CC GVR+LN A+TTPDRQ ACNCLK G+NA + AG+P +CGV+IPY I TDC++VR Sbjct: 1 MARSSAVCFLLLLAFLIG-TASAITCGQVDSDLTSCLGYARKGGVIPPG-CCAGVRTLNNLAKTTPDRQTACNCLKSLVNPSLGLNAAIVAGIPGKCGVNIPYPIRMQTDCNKVR 113
BLAST of CB304428 vs. ExPASy Swiss-Prot
Match: NLTP3_LENCU (Non-specific lipid-transfer protein 3 OS=Lens culinaris PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.427e-25 Identity = 59/115 (51.30%), Postives = 78/115 (67.83%), Query Frame = -1 Query: 252 ALKLVCASL-LCILVTAPVTNA-ITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 590 ++ L C +L +C++V AP+ A ++CG VTG LAPCI +L TGG P CC GV+ L AA TT DRQAACNCLK A +I +N AA LP +C V+IPYKIS T+C+ ++ Sbjct: 4 SMNLACVALVMCMVVIAPMAEAAVSCGTVTGDLAPCIPYL-TGGAGPTDSCCAGVKKLLAAAPTTADRQAACNCLKTAAGNINNLNPGNAAALPGKCNVNIPYKISTTTNCNTIK 117
BLAST of CB304428 vs. ExPASy Swiss-Prot
Match: NLTP2_ARATH (Non-specific lipid-transfer protein 2 OS=Arabidopsis thaliana GN=LTP2 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 9.250e-25 Identity = 59/119 (49.58%), Postives = 78/119 (65.55%), Query Frame = -1 Query: 252 LMAALKLVCASLLCILVTAPVT-NAI-TCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSI-PGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 599 + +KL C L C++V P+T NA+ +CG V G+LA CIA+L G CCNGV +L A TTPDRQ AC CL+ A +++ PG+N AAGLP C V+IPYKIS +T+C+ VR Sbjct: 1 MAGVMKLACMVLACMIVAGPITANALMSCGTVNGNLAGCIAYLTRGAPLTQG-CCNGVTNLKNMASTTPDRQQACRCLQSAAKAVGPGLNTARAAGLPSACKVNIPYKISASTNCNTVR 118
BLAST of CB304428 vs. ExPASy Swiss-Prot
Match: NLTP7_ARATH (Non-specific lipid-transfer protein 7 OS=Arabidopsis thaliana GN=LTP7 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.744e-23 Identity = 54/115 (46.96%), Postives = 75/115 (65.22%), Query Frame = -1 Query: 261 LKLVCASLLCILVTAPVTN--AITCGQVTGSLAPCIAFLRTGG-RFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSI-PGINANVAAGLPRQCGVSIPY--KISPNTDCS 587 +KL C + ++ P+T A++CG+V +L PC +L GG P P CCNGVR LNG TT DR+ AC C+K A R++ PG+NA+ AAG+PR+CG+ IPY +I NT C+ Sbjct: 5 MKLGCLVFVFVIAAGPITAKAALSCGEVNSNLKPCTGYLTNGGITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAARNVGPGLNADRAAGIPRRCGIKIPYSTQIRFNTKCN 119
BLAST of CB304428 vs. ExPASy Swiss-Prot
Match: NLTP5_VITSX (Non-specific lipid-transfer protein P5 OS=Vitis sp. PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.744e-23 Identity = 50/91 (54.95%), Postives = 66/91 (72.53%), Query Frame = -1 Query: 255 ITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 527 ++CG V LAPCI +LR+ G P CCNGV++L +A TT DR+ AC CL A +SI G+N +AAGLP +CGV+IPYKISP+T+C +V Sbjct: 1 LSCGDVATQLAPCINYLRSAGPLPVA-CCNGVKNLKNSAATTQDRRTACKCLINASKSISGVNFGLAAGLPGKCGVNIPYKISPSTNCDQV 90
BLAST of CB304428 vs. ExPASy Swiss-Prot
Match: NLTP_ELECO (Non-specific lipid-transfer protein OS=Eleusine coracana PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.886e-23 Identity = 51/93 (54.84%), Postives = 66/93 (70.97%), Query Frame = -1 Query: 255 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNC-LKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 530 AI+CGQV+ ++ PC+A+ R G P C +GVRSLN AARTT DR+AACNC LK A + G+NA A+ +P +CGV +PY IS + DCSRV Sbjct: 1 AISCGQVSSAIGPCLAYARGAGAAPSASCQSGVRSLNAAARTTADRRAACNCSLKSAASRVSGLNAGKASSIPGRCGVRLPYAISASIDCSRV 93
BLAST of CB304428 vs. ExPASy Swiss-Prot
Match: NLTP8_HORVU (Non-specific lipid-transfer protein Cw18 OS=Hordeum vulgare GN=CW18 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.075e-23 Identity = 53/114 (46.49%), Postives = 72/114 (63.16%), Query Frame = -1 Query: 255 AALKLVCASLLCILVTAPVTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPG-INANVAAGLPRQCGVSIPYKISPNTDCSRV 593 AA KL +L+ ++ AITCGQV+ +L PC A+ + G P CC+GV+ L G AR+T D+QA C CLK S+ G NA AAG+P +CGVS+PY IS + DCS++ Sbjct: 5 AATKLALVALVAAMLLVAADAAITCGQVSSALGPCAAYAKGSGTSPSAGCCSGVKRLAGLARSTADKQATCRCLK----SVAGAYNAGRAAGIPSRCGVSVPYTISASVDCSKI 114
BLAST of CB304428 vs. ExPASy Swiss-Prot
Match: NLTP1_PHAAU (Non-specific lipid-transfer protein 1 OS=Phaseolus aureus PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.629e-23 Identity = 49/91 (53.85%), Postives = 67/91 (73.63%), Query Frame = -1 Query: 255 ITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 527 +TCGQV G+LA CI FL+ GG PP CC GV+++ ++RTT DR+A C+CLK A ++ GIN N A LP +CGV+IPYKIS +T+C+ + Sbjct: 1 MTCGQVQGNLAQCIGFLQKGG-VVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCNSI 90 The following BLAST results are available for this feature:
BLAST of CB304428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304428 ID=CB304428; Name=CB304428; organism=Citrus sinensis; type=EST; length=665bpback to top |