CB304492
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304492 vs. ExPASy Swiss-Prot
Match: NLTP3_HORVU (Non-specific lipid-transfer protein 3 OS=Hordeum vulgare GN=LTP3 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.023e-23 Identity = 49/108 (45.37%), Postives = 72/108 (66.67%), Query Frame = -3 Query: 256 VCALLLCILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 579 V ++ ++ AI+CGQV+++L+PCI + R G PP CCSGV+ L GAA++T D+QAAC CLK +I+GI +G+P +CGV +P+ IS STDC++V Sbjct: 10 VLVAMVAAMLLVATDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACRCLKSLATSIKGINMGKVSGVPGKCGVSVPFPISMSTDCNKV 117
BLAST of CB304492 vs. ExPASy Swiss-Prot
Match: NLTP3_BRANA (Non-specific lipid-transfer protein 3 OS=Brassica napus GN=LTP3 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.278e-23 Identity = 55/110 (50.00%), Postives = 69/110 (62.73%), Query Frame = -3 Query: 253 CALLLCILVTAPVTN--AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 576 C +L C++V P+ A++CG V+ +LA CI +L G P CCSGV SLN ARTTPDRQ AC CL A + I AAGLP CGV IPYKIS +T+C+ V+ Sbjct: 9 CLVLACMIVAGPIATNAALSCGTVSGNLAACIGYLTQNGPVPTA-CCSGVTSLNNMARTTPDRQQACRCLVGAANALPTINVARAAGLPKACGVNIPYKISKTTNCNSVK 117
BLAST of CB304492 vs. ExPASy Swiss-Prot
Match: NLTPA_BRAOT (Non-specific lipid-transfer protein A OS=Brassica oleracea var. italica GN=WAX9A PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.975e-23 Identity = 53/114 (46.49%), Postives = 74/114 (64.91%), Query Frame = -3 Query: 253 CALLLCILVTAPVT--NAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNV----AAGLPSQCGVRIPYKISPSTDCSRVR 576 C +L C++V P+T A+TCG V +++APCI ++ GG P CC+GV LN ARTTPDRQ AC CL+ A R + PN+ AAG+P CGV +P+ IS +T+C+ V+ Sbjct: 9 CLVLACMIVAGPITANRALTCGTVNSNVAPCIGYITQGGTLPGA-CCTGVSKLNSMARTTPDRQQACRCLETA---ARALGPNLNAGRAAGIPKACGVSVPFPISTNTNCNNVK 118
BLAST of CB304492 vs. ExPASy Swiss-Prot
Match: NLTP_ELECO (Non-specific lipid-transfer protein OS=Eleusine coracana PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.886e-23 Identity = 51/93 (54.84%), Postives = 65/93 (69.89%), Query Frame = -3 Query: 256 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNC-LKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 531 AI+CGQV++++ PC+ + R G P C SGVRSLN AARTT DR+AACNC LK A + G+ A+ +P +CGVR+PY IS S DCSRV Sbjct: 1 AISCGQVSSAIGPCLAYARGAGAAPSASCQSGVRSLNAAARTTADRRAACNCSLKSAASRVSGLNAGKASSIPGRCGVRLPYAISASIDCSRV 93
BLAST of CB304492 vs. ExPASy Swiss-Prot
Match: NLTPB_BRAOT (Non-specific lipid-transfer protein B OS=Brassica oleracea var. italica GN=WAX9B PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 5.075e-23 Identity = 54/110 (49.09%), Postives = 69/110 (62.73%), Query Frame = -3 Query: 253 CALLLCILVTAPVTN--AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 576 C +L C++V P+ A++CG V+ +LA CI +L G P CC+GV +LN ARTTPDRQ AC CL A + + AAGLP CGV IPYKIS ST+C+ VR Sbjct: 9 CLVLACMIVAGPIATNAALSCGTVSGNLAACIGYLTQNGPLPRG-CCTGVTNLNNMARTTPDRQQACRCLVGAANSFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117
BLAST of CB304492 vs. ExPASy Swiss-Prot
Match: NLTP1_BRANA (Non-specific lipid-transfer protein 1 OS=Brassica napus GN=LTP1 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 6.628e-23 Identity = 54/110 (49.09%), Postives = 68/110 (61.82%), Query Frame = -3 Query: 253 CALLLCILVTAPVTN--AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 576 C +L C++V P+ A++CG V+ +LA CI +L G P CC+GV +LN ARTTPDRQ AC CL A + AAGLP CGV IPYKIS ST+C+ VR Sbjct: 9 CLVLACMIVAGPIATNAALSCGTVSGNLAACIGYLTQNGPLPRG-CCTGVTNLNNMARTTPDRQQACRCLVGAANAFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117
BLAST of CB304492 vs. ExPASy Swiss-Prot
Match: NLTP5_VITSX (Non-specific lipid-transfer protein P5 OS=Vitis sp. PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 5.611e-22 Identity = 48/91 (52.75%), Postives = 63/91 (69.23%), Query Frame = -3 Query: 256 ITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 528 ++CG V LAPCI +LR+ G P CC+GV++L +A TT DR+ AC CL A +I G+ +AAGLP +CGV IPYKISPST+C +V Sbjct: 1 LSCGDVATQLAPCINYLRSAGPLPVA-CCNGVKNLKNSAATTQDRRTACKCLINASKSISGVNFGLAAGLPGKCGVNIPYKISPSTNCDQV 90
BLAST of CB304492 vs. ExPASy Swiss-Prot
Match: NLTPC_ARATH (Non-specific lipid-transfer protein 12 OS=Arabidopsis thaliana GN=LTP12 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.637e-21 Identity = 48/107 (44.86%), Postives = 67/107 (62.62%), Query Frame = -3 Query: 256 CALLLCILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 576 C ++L I + +P + I CG VT++LA C+ +L G P CC GV+SL A+TTPDR+ C CLK A I+G+ ++ A LP+ CGV IPY IS ST+C + Sbjct: 10 CLIVLTIYMASPTESTIQCGTVTSTLAQCLTYLTNSGPLPSQ-CCVGVKSLYQLAQTTPDRKQVCECLKLAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNCDSI 115
BLAST of CB304492 vs. ExPASy Swiss-Prot
Match: NLTP8_HORVU (Non-specific lipid-transfer protein Cw18 OS=Hordeum vulgare GN=CW18 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.750e-21 Identity = 50/106 (47.17%), Postives = 67/106 (63.21%), Query Frame = -3 Query: 256 ALLLCILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 573 AL+ +L+ A AITCGQV+++L PC + + G P CCSGV+ L G AR+T D+QA C CLK G + AAG+PS+CGV +PY IS S DCS++ Sbjct: 13 ALVAAMLLVA-ADAAITCGQVSSALGPCAAYAKGSGTSPSAGCCSGVKRLAGLARSTADKQATCRCLKSVAGAYNAGR---AAGIPSRCGVSVPYTISASVDCSKI 114
BLAST of CB304492 vs. ExPASy Swiss-Prot
Match: NLTP3_VITSX (Non-specific lipid-transfer protein P3 OS=Vitis sp. PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 6.204e-21 Identity = 47/91 (51.65%), Postives = 62/91 (68.13%), Query Frame = -3 Query: 256 ITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 528 ++CG V +A CI +LR G P CC+GV++L +A TT DR+ AC CL A TI G+ +AAGLP++CGV IPYKISPST+C +V Sbjct: 1 LSCGDVATQMASCINYLRGAGPLPAA-CCNGVKNLKNSATTTQDRRTACKCLISASKTISGVNFGLAAGLPAKCGVSIPYKISPSTNCDQV 90 The following BLAST results are available for this feature:
BLAST of CB304492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304492 ID=CB304492; Name=CB304492; organism=Citrus sinensis; type=EST; length=581bpback to top |