CB304513

Overview
NameCB304513
Unique NameCB304513
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: BIP3_TOBAC (Luminal-binding protein 3 (Fragment) OS=Nicotiana tabacum GN=BIP3 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.250e-35
Identity = 70/128 (54.69%), Postives = 102/128 (79.69%), Query Frame = -2
Query:  214 KITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKD-EKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQ-GGGADAGASMDED 591
            KITITNDKGRLS+EEIE+MV+EAE++  ED + K++++A+N LE Y YNM+N I D +K++ KL + +K+KIE A++EA++WLD NQ AE +++E+K+KE+E +CNPII  +YQ  GGA  G+S  E+
Sbjct:   35 KITITNDKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNGLETYVYNMKNQINDKDKLADKLESDEKEKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGASGGSSSSEE 162          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: HSP70_NEUCR (Heat shock 70 kDa protein OS=Neurospora crassa GN=hsps-1 PE=2 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 1.632e-35
Identity = 69/121 (57.02%), Postives = 91/121 (75.21%), Query Frame = -2
Query:  232 NKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAG 594
            N+ITITNDKGRLSKEEIE+M+ EAEK+K ED+   K+V AKN LE+YAY++RNT+ D K+  KL  ADK+K++  I++ + WLD NQ A  +E+E++ KELE I NPI+ K Y  GGA  G
Sbjct:  498 NQITITNDKGRLSKEEIERMLAEAEKFKEEDEAEAKRVAAKNGLESYAYSLRNTLSDSKVDEKLDAADKEKLKSEIDKIVAWLDENQQATREEYEERQKELEAIANPIMMKFYGAGGAPGG 618          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: HSP70_LEIAM (Heat shock 70 kDa protein OS=Leishmania amazonensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.632e-35
Identity = 78/152 (51.32%), Postives = 99/152 (65.13%), Query Frame = -2
Query:  160 KNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQ--GGGADAGASMDE----DXXXXXXXXXXXPKIEEVD 597
            +N+ITITNDKGRLSK+EIE+MV +A KY+A+D     +VEAKN LENYAY+M+NT+ D  +S KL   DK  +   IE A++WL  NQ A  +E+E K KELE +CNPI+ KMYQ  GGGA   A M +                PK+EEVD
Sbjct:  501 RNQITITNDKGRLSKDEIERMVNDAMKYEADDKAQADRVEAKNGLENYAYSMKNTLGDSNVSGKLDDTDKSTLNKEIEAALEWLSSNQEATKEEYEHKQKELENVCNPIMTKMYQSMGGGAGGMAGMPDMSSMSGARPAGGASSGPKVEEVD 652          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: BIP1_TOBAC (Luminal-binding protein 1 (Fragment) OS=Nicotiana tabacum GN=BIP1 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.132e-35
Identity = 71/128 (55.47%), Postives = 102/128 (79.69%), Query Frame = -2
Query:  214 KITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKD-EKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQ-GGGADAGASMDED 591
            KITITNDKGRLS+EEIE+MV+EAE++  ED + K++++A+N+LE Y YNM+N I D +K++ KL + +K+KIE A +EA++WLD NQ AE +++E+K+KE+E ICNPII  +YQ  GGA  G S +E+
Sbjct:  156 KITITNDKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNSLETYVYNMKNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYEEKLKEVEAICNPIITAVYQRSGGAPGGGSSEEE 283          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: HSP74_TRYBB (Heat shock 70 kDa protein 4 OS=Trypanosoma brucei brucei PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 2.784e-35
Identity = 69/128 (53.91%), Postives = 93/128 (72.66%), Query Frame = -2
Query:  217 KNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQG-GGADAGASMDE 597
            +N+I ITNDKGRLSK +IE+MV +A KY+AED  H   ++AKN LENYA++M+NTI D  ++ KL  ADK  +  A+EEA++WL+ NQ A  +E+  + KELEG+C PI++KMYQG GG D    M E
Sbjct:  501 RNQIVITNDKGRLSKADIERMVSDAAKYEAEDKAHVXXIDAKNGLENYAFSMKNTINDPNVAGKLDDADKNAVTTAVEEALRWLNDNQEASLEEYNHRQKELEGVCAPILSKMYQGMGGGDGPGGMPE 628          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: HSP70_PLEWA (Heat shock 70 kDa protein OS=Pleurodeles waltlii GN=HSP70 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.784e-35
Identity = 69/127 (54.33%), Postives = 97/127 (76.38%), Query Frame = -2
Query:  226 KNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQG---GGADAGAS 597
            +NKITITNDKGRLSKEEIE+MVQEAE+YKA+D+  ++KV AKN LE+ A+NM++T++ + +  K+   D+KKI D   + I W++ NQ+AE +E+E + KELE +CN II K+YQG   GG  +G+S
Sbjct:  500 QNKITITNDKGRLSKEEIERMVQEAERYKADDEAQREKVSAKNTLESIAFNMKSTVEGDNLKDKISEDDRKKIVDKCNQTISWMENNQMAEKEEYEHQQKELEKVCNSIITKLYQGGMPGGMPSGSS 626          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: BIP2_TOBAC (Luminal-binding protein 2 (Fragment) OS=Nicotiana tabacum GN=BIP2 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.784e-35
Identity = 70/128 (54.69%), Postives = 102/128 (79.69%), Query Frame = -2
Query:  214 KITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKD-EKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQ-GGGADAGASMDED 591
            KITITNDKGRLS+EEIE+MV+EAE++  ED + K++++A+N+LE Y YNM+N I D +K++ KL + +K+KIE A +EA++WLD NQ AE +++E+K+KE+E +CNPII  +YQ  GGA  G S +E+
Sbjct:  156 KITITNDKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNSLETYVYNMKNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGGGSSEEE 283          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: HSP71_PARBA (Heat shock 70 kDa protein 1 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-1 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 4.749e-35
Identity = 68/118 (57.63%), Postives = 88/118 (74.58%), Query Frame = -2
Query:  241 NKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGA 594
            NKI ITNDKGRLSKEEIE+M+ EAEKYKAED+    ++ AKN LE+YAY++RNTI D K+  KL  +DK+K++  I++ + WLD NQ A  +EFE + KELE + NPI+ K Y  GGA
Sbjct:  496 NKIVITNDKGRLSKEEIERMLAEAEKYKAEDEAEASRISAKNGLESYAYSLRNTISDSKVDEKLDASDKEKLKTEIDKTVSWLDENQTATKEEFEAQQKELESVANPIMMKFYGAGGA 613          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: HSP70_THEPA (Heat shock 70 kDa protein OS=Theileria parva GN=TP02_0148 PE=2 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 4.749e-35
Identity = 67/123 (54.47%), Postives = 96/123 (78.05%), Query Frame = -2
Query:  223 ITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGA-DAGASM 588
            +TITNDKGRLS+EEI++MV+EAEKYK ED++ +K VE+K+ LENY Y+M+NT+ ++++  KL   +     + I EA++W++ NQLAE DEFEDK+K +EG+CNP++ K+YQ GGA  AG  M
Sbjct:  502 VTITNDKGRLSQEEIDRMVEEAEKYKEEDEKRRKCVESKHKLENYCYSMKNTLSEDQVKQKLGADEVDNALNTITEALKWVETNQLAEHDEFEDKLKHVEGVCNPLVTKLYQSGGAPGAGPDM 624          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: HSP70_TRIRU (Heat shock 70 kDa protein OS=Trichophyton rubrum GN=HSP70 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 6.203e-35
Identity = 68/122 (55.74%), Postives = 91/122 (74.59%), Query Frame = -2
Query:  229 NKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGA 594
            NKI ITNDKGRLSKEEIE+M+ EAEKYKAED+    ++ AKN LE+YAY+++NT+ D K+  KL  ADK+K++  I++ + WLD NQ A  +E+E + KELEG+ NPI+ K Y G G + GA
Sbjct:  498 NKIVITNDKGRLSKEEIERMLAEAEKYKAEDEAETARIGAKNGLESYAYSLKNTLSDSKVDEKLDAADKEKLKSEIDKVVAWLDDNQTATKEEYESQQKELEGVANPIMMKFY-GAGGEGGA 618          
The following BLAST results are available for this feature:
BLAST of CB304513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 200
Match NameE-valueIdentityDescription
BIP3_TOBAC1.250e-3554.69Luminal-binding protein 3 (Fragment) OS=Nicotiana ... [more]
HSP70_NEUCR1.632e-3557.02Heat shock 70 kDa protein OS=Neurospora crassa GN=... [more]
HSP70_LEIAM1.632e-3551.32Heat shock 70 kDa protein OS=Leishmania amazonensi... [more]
BIP1_TOBAC2.132e-3555.47Luminal-binding protein 1 (Fragment) OS=Nicotiana ... [more]
HSP74_TRYBB2.784e-3553.91Heat shock 70 kDa protein 4 OS=Trypanosoma brucei ... [more]
HSP70_PLEWA2.784e-3554.33Heat shock 70 kDa protein OS=Pleurodeles waltlii G... [more]
BIP2_TOBAC2.784e-3554.69Luminal-binding protein 2 (Fragment) OS=Nicotiana ... [more]
HSP71_PARBA4.749e-3557.63Heat shock 70 kDa protein 1 OS=Paracoccidioides br... [more]
HSP70_THEPA4.749e-3554.47Heat shock 70 kDa protein OS=Theileria parva GN=TP... [more]
HSP70_TRIRU6.203e-3555.74Heat shock 70 kDa protein OS=Trichophyton rubrum G... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0001_IIaR_H09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0001_IIaR_H09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304513 ID=CB304513; Name=CB304513; organism=Citrus sinensis; type=EST; length=598bp
TTTTTTTTTTTTTTTTTTTTTTTTTGAAACATAATATCTTTATGCATACA
CCAGGAAACAGTATTTACATGTAACAGAAGCAGGAAAAGGAAGAAAAGAT
CACACTCCCAACTCAACCCCTAATCATTAAACAACATTAAGCATAAATCC
TCAAATTTAATCCACCTCCTCAATCTTGGGGCCAGCACCGCTACCAGCAC
CAGCAGAAGGACCATCCTCATCCATACTTGCACCAGCATCAGCTCCACCT
CCTTGGTACATCTTGGCAATAATTGGGTTGCAGATGCCCTCCAGCTCTTT
CATCTTATCTTCAAACTCATCTGCCTCTGCGAGCTGGTTCCCGTCAAGCC
ATTGGATGGCCTCCTCAATGGCATCTTCAATTTTCTTCTTGTCAGCAGTG
GGAAGCTTTGCGCTGATCTTTTCATCCTTGATTGTGTTTCTCATGTTGTA
AGCATAATTCTCGAGAGCATTCTTGGCCTCCACCTTTTTCTTGTGCTCGT
CATCCTCGGCCTTGTATTTTTCTGCCTCTTGTACCATCTTCTCTATCTCC
TCCTTAGAGAGTCTGCCCTTGTCATTTGTGATGGTAATCTTATTCTTC
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