CB304552
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 2.479e-35 Identity = 65/126 (51.59%), Postives = 92/126 (73.02%), Query Frame = -2 Query: 80 NGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGR-TVTSNNVVPANW 454 NGGWCNPP HFD+ +PAF++IA ++AGI+P+S+RR+ C K GGIRF G+ Y+ LV V NVGG GD+ ++++KGS+TGW MS NWG ++Q+ GQSL F++T+ R T+ + N PA+W Sbjct: 119 NGGWCNPPRVHFDLTKPAFMKIANWKAGIIPVSYRRVACKKIGGIRFKFEGNGYWLLVYVMNVGGPGDIKTMAVKGSRTGWINMSHNWGASYQAFSSLYGQSLSFRLTSYTTRQTIYAYNAAPASW 244
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 7.213e-35 Identity = 66/127 (51.97%), Postives = 90/127 (70.87%), Query Frame = -2 Query: 80 NGGWCNPPLQHFDMAEPAFLQIAQY-RAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 454 N GWCN P HFDM+ PAF +IA+ GIVP+ +RR+ C ++GG+RFT+ G FN+V+++NVGG G V SV+++GSK W M+RNWG NWQS+ GQ L F+VT +D +T T NVVP++W Sbjct: 112 NNGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRRVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWGANWQSSGDLRGQRLSFKVTLTDSKTQTFLNVVPSSW 238
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 9.420e-35 Identity = 68/124 (54.84%), Postives = 87/124 (70.16%), Query Frame = -2 Query: 80 GGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 451 GG CNPP +HF + AF +IA ++AG +P+ +RRI C K+G +RFTV+G F VL+TNV G+GD+ +V IKGS+TGW M RNWGQNW N Q+L F+VT+SD TVTS NV P NW Sbjct: 129 GGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRINCRKEGSMRFTVDGGGIFISVLITNVAGSGDIAAVKIKGSRTGWLPMGRNWGQNWHINADLRNQALSFEVTSSDRSTVTSYNVSPKNW 252
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.741e-34 Identity = 63/124 (50.81%), Postives = 88/124 (70.97%), Query Frame = -2 Query: 80 GGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 451 GGWCN +FDM++PA+ I Y AGIVPI ++++ C + GG+RF +NG +YF LVLVTN+ G+G + S+S+KGS TGW M+RNWG NWQ GQ+L F VT++ G+T+ ++ VPA W Sbjct: 103 GGWCNATRPYFDMSQPAWENIGIYSAGIVPILYQQVKCWRYGGVRFIINGFNYFELVLVTNMAGSGSIVSMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGW 226
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3) HSP 1 Score: 140.969 bits (354), Expect = 2.320e-33 Identity = 63/122 (51.64%), Postives = 85/122 (69.67%), Query Frame = -2 Query: 80 WCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 445 WC P +HFD++ P F++IAQ +A +VP+ +RR+PCAK GG++F V G+ +L NVGGAGD+ +VS KGSKT W MSR WGQNW +N GQS+ +VT SDG T +V+PA+W Sbjct: 129 WCYLPNKHFDLSLPMFIKIAQVKAKMVPVRYRRVPCAKTGGVKFEVKGNPNILTILPYNVGGAGDIIAVSAKGSKTAWVVMSRYWGQNWTTNVNLTGQSVSLRVTTSDGITKDFTDVMPASW 250
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 8.817e-33 Identity = 62/126 (49.21%), Postives = 90/126 (71.43%), Query Frame = -2 Query: 80 GGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIK-GSKTGWQAMSRNWGQNWQSNFYFNGQSLFFQVTA-SDGRTVTSNNVVPANW 451 GGWCNPP HFD+++PAF+++A +RAGIVP+ +RR+PCA+ GG+RF + G+ Y+ L V NV GAGDV + +K G GW MS NWG ++Q+ GQ+L F+VT+ + G+T+ + V PA+W Sbjct: 128 GGWCNPPRAHFDLSKPAFMRMADWRAGIVPVMYRRVPCARAGGLRFALQGNPYWLLAYVMNVAGAGDVGDMWVKAGGGGGWVRMSHNWGASYQAFAQLGGQALSFKVTSYTTGQTILAAGVTPASW 253
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 5.715e-32 Identity = 59/124 (47.58%), Postives = 85/124 (68.55%), Query Frame = -2 Query: 80 GGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 451 GGWCN P +H +++ AF IA+ RA ++PI +RR+ C ++GG+RF+++G S+F VL++NVG G+V V +KG T W M+RNWGQNW S+ GQSL F+VT G+T+ S +V P W Sbjct: 120 GGWCNFPKEHLELSHAAFTGIAETRAEMIPIQYRRVKCGRRGGLRFSLSGSSHFFQVLISNVGLDGEVVGVKVKGHTTAWIPMARNWGQNWHSSLDLIGQSLSFEVTLKGGKTIASYDVAPPYW 243
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 6.539e-28 Identity = 52/117 (44.44%), Postives = 81/117 (69.23%), Query Frame = -2 Query: 80 QHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 427 +HFD+ PAFL IA+ + G+VP+S+R++ C ++GGI++T+ G+ +N+V+V NVGGAGDV +++KG+K W + R+WGQ W++ G+SL F+V D R TS V P +W Sbjct: 162 EHFDLTMPAFLSIAEEKLGVVPVSYRKVACVRQGGIKYTITGNPSYNMVMVKNVGGAGDVVKLTVKGTKRVKWTPLQRSWGQLWKTEANLTGESLTFRVMTGDHRKATSWRVAPRDW 278
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXP17_ORYSJ (Expansin-A17 OS=Oryza sativa subsp. japonica GN=EXPA17 PE=2 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 1.233e-26 Identity = 58/117 (49.57%), Postives = 77/117 (65.81%), Query Frame = -2 Query: 110 NGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTG--WQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTV 454 +GGWCNPP HFDMA P+FL++AQ AGIVP+ +RR+PC + GG+RF + G+ Y+ L+ V NVGGAGDV S+S+K S G W + NWG +Q +F + SDG TV Sbjct: 142 DGGWCNPPRHHFDMAPPSFLKLAQRVAGIVPVQYRRVPCQRTGGVRFCLQGNHYWLLLYVMNVGGAGDVSSLSVKTSGGGGAWIQAAHNWGITYQ---------VFAALDNSDGLTV 249
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXPB5_ORYSJ (Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXPB5 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 7.760e-13 Identity = 44/139 (31.65%), Postives = 72/139 (51.80%), Query Frame = -2 Query: 80 GGWCNPPLQHFDMAEPAFLQIAQY-------RAGIVPISFRRIPCAKKGGIRFTVNGHS--YFNLVLVTNVGGAGDVHSVSIKGSKTG--WQAMSRNWGQNWQSNFYFNGQSL----FFQVTASDGRTVTSNNVVPANW 451 GG C HFDM+ AF +A AG++ I ++R+PC + F V+ S Y+ +LV G GD+ +V I ++ G W+AM ++WG W+ N G+ L ++T+ G+ + +NNV+P+ W Sbjct: 124 GGVCLNEAAHFDMSGTAFGAMANRGMGDRLRSAGVLKIQYKRVPCRFAMNVAFKVDAGSNPYYLAILVQYANGDGDLAAVHIMEARGGGGWKAMQQSWGATWRLNSN-TGKPLSPPFSIRLTSGSGKVLVANNVIPSGW 261 The following BLAST results are available for this feature:
BLAST of CB304552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304552 ID=CB304552; Name=CB304552; organism=Citrus sinensis; type=EST; length=455bpback to top |