CB304552
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXB11_ORYSJ (Expansin-B11 OS=Oryza sativa subsp. japonica GN=EXPB11 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.851e-12 Identity = 43/138 (31.16%), Postives = 73/138 (52.90%), Query Frame = -2 Query: 80 GGWCNPPLQHFDMAEPAFLQIAQ-------YRAGIVPISFRRIPCAKKG-GIRFTVN--GHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNFYFNGQSL----FFQVTASDGRTVTSNNVVPANW 451 GG C HFDM+ + +A+ AGI+ + +RR+PC G I F V+ + ++ VL+ G GD+++V + + GW M +NWG W+ N G++L ++T+ G+ + +NNV+PA+W Sbjct: 143 GGICLAGAAHFDMSGTSMGAMAKPGMADKLRAAGILQVQYRRVPCKYSGVNIAFRVDQGANPFYFEVLIEFEDGDGDLNAVDLMEAGCGWTPMVQNWGALWRYNSN-TGKALKAPFSLRLTSDSGKVLVANNVIPASW 279
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXB14_ORYSJ (Putative expansin-B14 OS=Oryza sativa subsp. japonica GN=EXPB14 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 6.569e-12 Identity = 43/144 (29.86%), Postives = 71/144 (49.31%), Query Frame = -2 Query: 80 GGWCNPPLQHFDMAEPAFLQIAQ-------YRAGIVPISFRRIPCAKKG---GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSI-----KGSKTGWQAMSRNWGQNWQSNFYFNGQS-----LFFQVTASDGRTVTSNNVVPANW 451 GG C HFD++ AF +A+ AG +P+ + R+PC +G R + Y+ VLV + G GD+ +V + G W AM ++WG W+ N +G + + ++T+ GRT+ ++NV+PA W Sbjct: 117 GGACLEEPVHFDLSGTAFGAMAKPGQDDQLRNAGKLPVQYARVPCKWQGVDIAFRVDAGSNQYYLAVLVEDEDGDGDLSAVDLMQSGGSGGGGSWAAMQQSWGAVWKYN---SGPAPLQAPMSIRLTSGSGRTLVASNVIPAGW 257
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXB15_ORYSJ (Expansin-B15 OS=Oryza sativa subsp. japonica GN=EXPB15 PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 3.260e-11 Identity = 45/138 (32.61%), Postives = 72/138 (52.17%), Query Frame = -2 Query: 80 GGWCNPPLQHFDMAEPAFLQIA------QYRA-GIVPISFRRIPCAKKGGIRFT----VNGHSYFNLVLVTNVGGAGDVHSVSIK--GSKTGWQAMSRNWGQNWQSNFYFNGQSLF-FQVTASDGRTVTSNNVVPANW 451 GG C HFD++ AF +A Q RA G++ I + R+PC GG++ T V + + VLV G GD+ V + G+ W M ++WG W+ N Q+ F ++T+S G+T+ ++NV+P+ W Sbjct: 116 GGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPC-NWGGVKLTFVVDVGSNPNYFAVLVKYENGDGDLSGVELMQTGAGAAWTQMQQSWGAVWKLNAGSALQAPFSIRLTSSSGKTLVASNVIPSGW 252
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXPB4_ORYSJ (Expansin-B4 OS=Oryza sativa subsp. japonica GN=EXPB4 PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.486e-11 Identity = 47/134 (35.07%), Postives = 67/134 (50.00%), Query Frame = -2 Query: 80 HFDMAEPAFLQIAQ-------YRAGIVPISFRRIPCAKKG-GIRFTVNGHS---YFNLVLVTNVGGAGDVHSVSIKGSKTG-------WQAMSRNWGQNWQSNFYFNGQSLF-FQVTASDGRTVTSNNVVPANW 424 HFD++ AF ++A+ +GI+ I F R+PC G I F V +S YF VLV G GDV V + SKT W M +WG W+ + Q+ F ++ G+T+ +NNV+PANW Sbjct: 141 HFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVYF-AVLVEYEDGDGDVVQVDLMESKTAHGPPTGRWTPMRESWGSIWRLDTNHRLQAPFSIRIRNESGKTLVANNVIPANW 273 The following BLAST results are available for this feature:
BLAST of CB304552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304552 ID=CB304552; Name=CB304552; organism=Citrus sinensis; type=EST; length=455bpback to top |