CB304568
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.942e-21 Identity = 66/187 (35.29%), Postives = 105/187 (56.15%), Query Frame = -2 Query: 132 EWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGR------MMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSL---YGPFPELISPEKPARFRQFTHTDYITRFFTKQLDGK 662 E+ +++L E + V+ E LG + +K+ +G+ V HY P CP+ DL G+ +HTD G + +L QDD+ GGLQ+ W+DV+P+ A+VIN GD ++++SN Y S HRVLA S R SIA F++PS + ++ G E +P PA + +F DY+ + ++ + K Sbjct: 114 EYREEIRKLAEKMMEVMDENLGFEKGCIKKAFSGDGQHPPFFGTKVSHYPP-CPRLDLVKGLRAHTDAGGVILLFQDDQVGGLQMLKDGRWIDVQPLADAIVINTGDQIEVLSNGRYKSAWHRVLATSHGNRR-SIASFYNPSLKATIAPAAGAATEEAAP--PALYPKFLFGDYMDVYAKQKYEPK 296
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: LDOX_VITVI (Leucoanthocyanidin dioxygenase OS=Vitis vinifera PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.259e-20 Identity = 65/193 (33.68%), Postives = 99/193 (51.30%), Query Frame = -2 Query: 186 VPEICRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLK------EKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSP------------------SERDSLYGPFPELISPEKPARFRQ 692 VP C E++ ++ L + VL GLGL+ RL+ E+ L+ ++ +YYP CPQP+L +G+ +HTD LT +L + GLQ+ + +WV K VP +++++IGD ++I+SN +Y S+ HR L N + RIS AVF P S S PFP + S R R+ Sbjct: 172 VPATC-----EYSVKLRSLATKILSVLSLGLGLEEGRLEKEVGGMEELLLQKKI---NYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGKWVTAKCVPNSIIMHIGDTIEILSNGKYKSILHRGLVNKE-KVRISWAVFCEPPKEKIILKAHCQRRCLRLSHHSSHLAPFPNIFSTSSSGRPRR 355
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 2.147e-20 Identity = 61/166 (36.75%), Postives = 87/166 (52.41%), Query Frame = -2 Query: 165 EWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYI 662 E+ + L + +L LG+K D +E +M +YYP C +PDLT+G H DP LTIL QD GLQ+ +W ++P P A V+NIGD +SND Y S HR + NS E R S+A F P ++D + P EL+ R+ FT + ++ Sbjct: 189 EYCEAMSSLSLKIMELLGLSLGVKRDYFREFFEENDSIMRLNYYPPCIKPDLTLGTGPHCDPTSLTILHQDHVNGLQVFVENQWRSIRPNPKAFVVNIGDTFMALSNDRYKSCLHRAVVNSESE-RKSLAFFLCP-KKDRVVTPPRELLDSITSRRYPDFTWSMFL 352
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.147e-20 Identity = 63/191 (32.98%), Postives = 101/191 (52.88%), Query Frame = -2 Query: 165 LTEPELKEVPEIC---RKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGRMMVG---HYYPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYI 716 L + L ++P++ R ++ ++ L E L +LCE LGL+ LK+ G YP CP+P++ G+ +HTD G + +L QDDK GLQ+ +W+DV P+ ++VIN+GD L++++N Y S+ HRV+ R+SIA F++P D+ P L K + F DY+ Sbjct: 98 LPQSNLYDIPDMSDEYRTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPACPKPEMIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGDWIDVPPLNHSIVINLGDQLEVITNGRYKSMMHRVVTQKEGN-RMSIASFYNPGS-DAEISPASSLAC--KETEYPSFVFDDYM 284
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: GAOX1_ORYSJ (Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 3.662e-20 Identity = 63/161 (39.13%), Postives = 86/161 (53.42%), Query Frame = -2 Query: 180 HHVKQLGELLFGVLCEGLGLKTDRLKE-KTFLEGR--MMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFT 653 H + +L L VL E LG+ DR + F + +M +YYP C +P T+G H DP LTIL QD GGL++ W ++P PGALV+N+GD +SN Y S HR + NS+ PR S+A F P E D++ P EL+ P + FT Sbjct: 176 HEMSRLSLELMEVLGESLGIVGDRRHYFRRFFQRNDSIMRLNYYPACQRPLDTLGTGPHCDPTSLTILHQDHVGGLEVWAEGRWRAIRPRPGALVVNVGDTFMALSNARYRSCLHRAVVNST-APRRSLAFFLCP-EMDTVVRPPEELVDDHHPRVYPDFT 334
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.783e-20 Identity = 59/198 (29.80%), Postives = 108/198 (54.55%), Query Frame = -2 Query: 108 EVPEICRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQ--IKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYITRFFTKQLDGKTLVNYYRL 695 E P R+ +++ V++L + +CEGLGLK + + +MM+ +YYP CP P T+G H D G L LLQ D GLQ I W+ V+P+P A V+N+G L++++N+++ HRV+ + + + R+SIA P + P EL++ + P ++ ++++++ + + + D + V Y++ Sbjct: 149 EKPAKYREVVAKYSVEVRKLTMRMLDYICEGLGLKLGYF-DNELSQIQMMLTNYYPPCPDPSSTLGSGGHYD-GNLITLLQQDLPGLQQLIVKDATWIAVQPIPTAFVVNLGLTLKVITNEKFEGSIHRVVTDPTRD-RVSIATLIGP-DYSCTIEPAKELLNQDNPPLYKPYSYSEFADIYLSDKSDYDSGVKPYKI 342
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: G2OX8_ARATH (Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 6.247e-20 Identity = 64/157 (40.76%), Postives = 81/157 (51.59%), Query Frame = -2 Query: 168 LGELLFGVLCEGLGLKTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDY 638 L +L VL E G + KE + + YP CP+P G+ HTD LTIL QD GGLQ+ W+ VKP P AL+INIGD+ Q SN Y SVEHRV+ N E R S A F PS Y E S ++PA +R F+ ++ Sbjct: 165 LAYMLAEVLAEKSGQNSSFFKENCVRNTCYLRMNRYPPCPKPSEVYGLMPHTDSDFLTILYQDQVGGLQLIKDNRWIAVKPNPKALIINIGDLFQAWSNGMYKSVEHRVMTNPKVE-RFSTAYFMCPS-----YDAVIE-CSSDRPA-YRNFSFREF 313
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: G3OX2_ARATH (Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA4H PE=1 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.178e-18 Identity = 55/172 (31.98%), Postives = 91/172 (52.91%), Query Frame = -2 Query: 165 EWNHHVKQLGELLFGVLCEGLGLKTDRLK---EKTFLEGRMMVG--HYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEE-WVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYI 662 E+ H+++L L LG++ ++ + +G V ++YP CP+PD +G+ +HTD +TIL Q++ GLQ+ + WV PVPG+LV+N+GD+L I++N + SV HR N R S+A + P D + P P+L+ P + + T Y+ Sbjct: 162 EYEEHMQKLAAKLMWFALGSLGVEEKDIQWAGPNSDFQGTQAVIQLNHYPKCPEPDRAMGLAAHTDSTLMTILYQNNTAGLQVFRDDVGWVTAPPVPGSLVVNVGDLLHILTNGIFPSVLHRARVN-HVRSRFSMAYLWGPPS-DIMISPLPKLVDPLQSPLYPSLTWKQYL 331
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.625e-18 Identity = 59/148 (39.86%), Postives = 76/148 (51.35%), Query Frame = -2 Query: 180 VLCEGLGLKTDRLKEKTFLEGR--MMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFT 617 VL E LG+ R + F EG +M +YYP C +P T+G H DP LTIL QD+ GGLQ+ W ++P A V+NIGD +SN Y S HR + NS PR S+A F P E D + P L+ P + FT Sbjct: 181 VLGESLGV--GRAHYRRFFEGNDSIMRLNYYPPCQRPMETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSK-VPRKSLAFFLCP-EMDKVVAPPGTLVDAANPRAYPDFT 324
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: GAO1A_WHEAT (Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.428e-18 Identity = 59/148 (39.86%), Postives = 76/148 (51.35%), Query Frame = -2 Query: 180 VLCEGLGLKTDRLKEKTFLEGR--MMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFT 617 VL E LG+ R + F EG +M +YYP C +P T+G H DP LTIL QD+ GGLQ+ W ++P A V+NIGD +SN Y S HR + NS PR S+A F P E D + P L+ P + FT Sbjct: 181 VLGESLGV--GRAHYRRFFEGNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSR-VPRKSLAFFLCP-EMDKVVAPPGTLVDASNPRAYPDFT 324 The following BLAST results are available for this feature:
BLAST of CB304568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304568 ID=CB304568; Name=CB304568; organism=Citrus sinensis; type=EST; length=732bpback to top |