CB304573
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304573 vs. ExPASy Swiss-Prot
Match: RS26A_SCHPO (40S ribosomal protein S26-A OS=Schizosaccharomyces pombe GN=rps26a PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.515e-26 Identity = 50/75 (66.67%), Postives = 61/75 (81.33%), Query Frame = -3 Query: 411 NGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 635 N GRNKHGRGH KF+RC NC + PKDKAIKR+ +RN+VE AA+RD+ EA VY Y +PK+Y K+QYCVSCAIH+ Sbjct: 7 NCGRNKHGRGHTKFVRCINCSRAVPKDKAIKRWNIRNMVETAAIRDLSEASVYSEYAIPKIYVKLQYCVSCAIHA 81
BLAST of CB304573 vs. ExPASy Swiss-Prot
Match: RS26L_HUMAN (Putative 40S ribosomal protein S26-like 1 OS=Homo sapiens GN=RPS26P11 PE=5 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.226e-24 Identity = 49/75 (65.33%), Postives = 58/75 (77.33%), Query Frame = -3 Query: 411 NGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 635 N K GRGHV+ IRC+NC +C P DKAIK+F++RNIVE AAVRD+ E V+D Y LPKLY K+ YCVSCAIHS Sbjct: 7 NNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFDAYVLPKLYVKLHYCVSCAIHS 81
BLAST of CB304573 vs. ExPASy Swiss-Prot
Match: RS26B_YEAST (40S ribosomal protein S26-B OS=Saccharomyces cerevisiae GN=RPS26B PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.208e-24 Identity = 51/75 (68.00%), Postives = 57/75 (76.00%), Query Frame = -3 Query: 411 NGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 635 + GRNK GRGHVK +RC NC K PKDKAIKR +RNIVE AAVRD+ EA VY Y LPK Y K+ YCVSCAIH+ Sbjct: 7 SNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYPEYALPKTYNKLHYCVSCAIHA 81
BLAST of CB304573 vs. ExPASy Swiss-Prot
Match: RS26A_YEAST (40S ribosomal protein S26-A OS=Saccharomyces cerevisiae GN=RPS26A PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.208e-24 Identity = 51/75 (68.00%), Postives = 57/75 (76.00%), Query Frame = -3 Query: 411 NGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 635 + GRNK GRGHVK +RC NC K PKDKAIKR +RNIVE AAVRD+ EA VY Y LPK Y K+ YCVSCAIH+ Sbjct: 7 SNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYPEYALPKTYNKLHYCVSCAIHA 81
BLAST of CB304573 vs. ExPASy Swiss-Prot
Match: RS26_DICDI (40S ribosomal protein S26 OS=Dictyostelium discoideum GN=rps26 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.097e-23 Identity = 47/78 (60.26%), Postives = 60/78 (76.92%), Query Frame = -3 Query: 408 NGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYD--GYTLPKLYAKMQYCVSCAIHSH 635 N GR+KHGRG V +IRC+NC +C PKDKA+KRF +R IVE AAV+D+ + V++ GY P+ Y K QYC+SCAIHSH Sbjct: 7 NHGRSKHGRGSVPYIRCTNCARCVPKDKAVKRFYIRPIVENAAVKDISDQGVFNVKGYKFPRTYVKSQYCISCAIHSH 84
BLAST of CB304573 vs. ExPASy Swiss-Prot
Match: RS26_OXYNO (40S ribosomal protein S26 OS=Oxytricha nova GN=RPS26 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.981e-19 Identity = 41/77 (53.25%), Postives = 55/77 (71.43%), Query Frame = -3 Query: 411 NGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVY--DGYTLPKLYAKMQYCVSCAIHS 635 N GRNK +GH +RC+NCG+ KDKAIKRF RN+V+ ++ RD+QE Y +T+PK+Y K+ YCVSCAIH+ Sbjct: 7 NNGRNKKNKGHADTVRCTNCGRVVSKDKAIKRFQQRNMVDASSKRDIQENYAYAQSDFTMPKIYVKLSYCVSCAIHA 83
BLAST of CB304573 vs. ExPASy Swiss-Prot
Match: RS26_ENCCU (40S ribosomal protein S26 OS=Encephalitozoon cuniculi GN=RPS26 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.232e-15 Identity = 35/75 (46.67%), Postives = 52/75 (69.33%), Query Frame = -3 Query: 411 NGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 635 N GR K RG I+C CG PKDKAIKRF +++++EQA+ D+++A +YD + +P++ K Q+CVSCA H+ Sbjct: 4 NHGRGKKNRGSAGSIQCDKCGSVTPKDKAIKRFRIQSLIEQASFDDLKQATIYDVFEVPRMGYKSQFCVSCACHA 78 The following BLAST results are available for this feature:
BLAST of CB304573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB304573 ID=CB304573; Name=CB304573; organism=Citrus sinensis; type=EST; length=637bpback to top |