CB304581
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304581 vs. ExPASy Swiss-Prot
Match: RL25_SPHAL (50S ribosomal protein L25 OS=Sphingopyxis alaskensis GN=rplY PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.617e-11 Identity = 29/89 (32.58%), Postives = 56/89 (62.92%), Query Frame = -1 Query: 414 EKVRVLPRKVHLPSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVTPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 680 +++R LP+ V D P++ FLR +A +++ VP+VF+ ++ +PGL++GG LN ++ ++ +C AD +P I +D++ D+ I Sbjct: 71 KQIRTLPKDVAFHPVKDRPIHADFLRIAKDATVQVAVPVVFQNEEKSPGLKRGGVLNIVRHELELVCDADNIPDEIAIDVTGFDIGDSI 159
BLAST of CB304581 vs. ExPASy Swiss-Prot
Match: RL25_OCHA4 (50S ribosomal protein L25 OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=rplY PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.112e-11 Identity = 28/96 (29.17%), Postives = 60/96 (62.50%), Query Frame = -1 Query: 393 EKVRVLPRKVHLPSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVTPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 680 +K++VLP+ L D P +V FLR ++++ ++VP+ F+ ++ PG+++GG LN ++ V+ + PA+ +P ++ DL+ L++ + +K+ Sbjct: 71 KKIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPGIKRGGVLNIVRHDVELIVPANAIPEALEFDLTGLEIGDSVHISAIKL 166
BLAST of CB304581 vs. ExPASy Swiss-Prot
Match: RL25_CAUCR (50S ribosomal protein L25 OS=Caulobacter crescentus GN=rplY PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.112e-11 Identity = 35/113 (30.97%), Postives = 60/113 (53.10%), Query Frame = -1 Query: 342 EKVRVLPRKVHLPSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVTPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLFRSKDEPVCKI 680 EK V+ + V TD P++ R L+KI+VP+ F+ + + GL+KGG L I+ TV+ CPAD +P + +DL+ D+ I ++K+ +K +D + + Sbjct: 70 EKQSVIAKAVQFHPVTDEPVHFDLYRVDEHQLIKIEVPVHFKNHETSVGLKKGGTLEVIRHTVELACPADKIPEELVIDLAGHDIGDVIRISEVKLPEGVKPAMDRDFVIANV 182
BLAST of CB304581 vs. ExPASy Swiss-Prot
Match: RL25_CAUCN (50S ribosomal protein L25 OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=rplY PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.112e-11 Identity = 35/113 (30.97%), Postives = 60/113 (53.10%), Query Frame = -1 Query: 342 EKVRVLPRKVHLPSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVTPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLFRSKDEPVCKI 680 EK V+ + V TD P++ R L+KI+VP+ F+ + + GL+KGG L I+ TV+ CPAD +P + +DL+ D+ I ++K+ +K +D + + Sbjct: 70 EKQSVIAKAVQFHPVTDEPVHFDLYRVDEHQLIKIEVPVHFKNHETSVGLKKGGTLEVIRHTVELACPADKIPEELVIDLAGHDIGDVIRISEVKLPEGVKPAMDRDFVIANV 182
BLAST of CB304581 vs. ExPASy Swiss-Prot
Match: RL25_NOVAD (50S ribosomal protein L25 OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=rplY PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.602e-11 Identity = 31/101 (30.69%), Postives = 59/101 (58.42%), Query Frame = -1 Query: 378 EKVRVLPRKVHLPSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVTPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK 680 + VR LP+ V TD P + FLR ++++ ++VP++F ++ +PGL+KGG LN ++ ++ +C D +P I +D++ +V I +K+ +K Sbjct: 71 QTVRTLPKDVAFHPVTDRPEHADFLRVSKDSVVHVNVPVIFANEEKSPGLKKGGVLNIVRHELELVCAPDAIPDDIVIDVAGYEVGDSIHISAVKLPAGVK 171 The following BLAST results are available for this feature:
BLAST of CB304581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB304581 ID=CB304581; Name=CB304581; organism=Citrus sinensis; type=EST; length=683bpback to top |