CB304613
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304613 vs. ExPASy Swiss-Prot
Match: NLTP1_HORVU (Non-specific lipid-transfer protein 1 OS=Hordeum vulgare GN=LTP1 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.204e-21 Identity = 49/110 (44.55%), Postives = 69/110 (62.73%), Query Frame = -3 Query: 255 LVCALLLCILVTAP-VANAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 581 L+ A L+ +L AP A A+ CGQV + + PC+ +++ GG P CC+GVR L+ A+++ DRQ CNCLK I + N AA +PS+C V +PY ISP DCSR+ Sbjct: 8 LMAAALVLMLTAAPRAAVALNCGQVDSKMKPCLTYVQ-GGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIHNLNLNNAASIPSKCNVNVPYTISPDIDCSRI 116
BLAST of CB304613 vs. ExPASy Swiss-Prot
Match: NLTP2_ARATH (Non-specific lipid-transfer protein 2 OS=Arabidopsis thaliana GN=LTP2 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.382e-20 Identity = 55/113 (48.67%), Postives = 70/113 (61.95%), Query Frame = -3 Query: 252 LVCALLLCILVTAPV-ANAI-TCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIR-GIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 581 L C +L C++V P+ ANA+ +CG V +LA CI +L G CC+GV +L A TTPDRQ AC CL+ A + G+ AAGLPS C V IPYKIS ST+C+ VR Sbjct: 7 LACMVLACMIVAGPITANALMSCGTVNGNLAGCIAYLTRGAPLTQG-CCNGVTNLKNMASTTPDRQQACRCLQSAAKAVGPGLNTARAAGLPSACKVNIPYKISASTNCNTVR 118
BLAST of CB304613 vs. ExPASy Swiss-Prot
Match: NLTP_AMACA (Non-specific lipid-transfer protein OS=Amaranthus caudatus PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.357e-20 Identity = 46/94 (48.94%), Postives = 63/94 (67.02%), Query Frame = -3 Query: 252 AITCGQVTASLAPCIPFLRTGGRFPPPP-CCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 530 A+TC VT +L PC+ +L+ G PPP CC+GVRSL AA+T DR+ ACNC+K A + + VAA L SQCGVR+ Y +SP+ +C+ V+ Sbjct: 1 AVTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSVQ 94
BLAST of CB304613 vs. ExPASy Swiss-Prot
Match: NLTP1_AMAHP (Non-specific lipid-transfer protein 1 OS=Amaranthus hypochondriacus PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.357e-20 Identity = 46/94 (48.94%), Postives = 63/94 (67.02%), Query Frame = -3 Query: 252 AITCGQVTASLAPCIPFLRTGGRFPPPP-CCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 530 A+TC VT +L PC+ +L+ G PPP CC+GVRSL AA+T DR+ ACNC+K A + + VAA L SQCGVR+ Y +SP+ +C+ V+ Sbjct: 1 AVTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSVQ 94
BLAST of CB304613 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSJ (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. japonica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.079e-20 Identity = 43/106 (40.57%), Postives = 67/106 (63.21%), Query Frame = -3 Query: 255 ALLLCILVTAPVANAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 572 A++ +V + A++CG VT+S+APC+ ++ P CCSGVR+LNG A ++ DR+ AC+CLK + R + AA +PS+CGV + + IS S DCS++ Sbjct: 15 AVVAAAVVAERASAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of CB304613 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSI (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. indica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.079e-20 Identity = 43/106 (40.57%), Postives = 67/106 (63.21%), Query Frame = -3 Query: 255 ALLLCILVTAPVANAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 572 A++ +V + A++CG VT+S+APC+ ++ P CCSGVR+LNG A ++ DR+ AC+CLK + R + AA +PS+CGV + + IS S DCS++ Sbjct: 15 AVVAAAVVAERASAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of CB304613 vs. ExPASy Swiss-Prot
Match: NLTP5_ARATH (Non-specific lipid-transfer protein 5 OS=Arabidopsis thaliana GN=LTP5 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.859e-20 Identity = 56/111 (50.45%), Postives = 71/111 (63.96%), Query Frame = -3 Query: 252 LLLCILVTAPVAN--AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLK---RAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 569 +++C+LVTAP+A+ AI+CG VT SL C +L GG F P CCSGV+ LN ARTT DRQ AC C++ RA G+ + AA LP C VRI Y IS T+C+ VR Sbjct: 11 VIVCMLVTAPMASEAAISCGAVTGSLGQCYNYLTRGG-FIPRGCCSGVQRLNSLARTTRDRQQACRCIQGAARALGS--RLNAGRAARLPGACRVRISYPISARTNCNTVR 118
BLAST of CB304613 vs. ExPASy Swiss-Prot
Match: NLTP1_HELAN (Non-specific lipid-transfer protein AP10 OS=Helianthus annuus PE=1 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 4.446e-19 Identity = 41/108 (37.96%), Postives = 69/108 (63.89%), Query Frame = -3 Query: 255 VCALLLCILVTAPVANAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 578 + A+++ + + AITC VT +L PC+P+LR+GG+ P P CC+G + L GA RT DR+ AC C K A ++ ++P++A+ LP +CG+ I+P+ +C+ + Sbjct: 10 ILAMIVMAQLMVHPSVAITCNDVTGNLTPCLPYLRSGGK-PTPACCAGAKKLLGATRTQADRRTACKCAKTAAPQLK-VRPDMASSLPGKCGISTSIPINPNVNCNTI 115
BLAST of CB304613 vs. ExPASy Swiss-Prot
Match: NLTPB_ARATH (Non-specific lipid-transfer protein 11 OS=Arabidopsis thaliana GN=LTP11 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 9.904e-19 Identity = 49/108 (45.37%), Postives = 62/108 (57.41%), Query Frame = -3 Query: 255 LLLCILVTAPVA---NAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 569 LLL I + +A AI C QV LA C+P+L+ GG P P CC+G+ SL AA DRQ ACNCLK TI GI + A LP++CGV I S + DC+ + Sbjct: 12 LLLVITILLGIAYHGEAIACPQVNMYLAQCLPYLKAGGN-PSPMCCNGLNSLKAAAPEKADRQVACNCLKSVANTIPGINDDFAKQLPAKCGVNIGVPFSKTVDCNSI 118
BLAST of CB304613 vs. ExPASy Swiss-Prot
Match: NLTP1_WHEAT (Non-specific lipid-transfer protein (Fragment) OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 2.882e-18 Identity = 45/109 (41.28%), Postives = 65/109 (59.63%), Query Frame = -3 Query: 255 LVCALLLCILVTAPVANAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 581 + AL+L + A AI CG V + + PC+ +++ GG P CC GV++L+ AR+ DRQ+ACNCLK I + + A +P +CGV +PY IS + DCSRV Sbjct: 6 MAVALVLMLAAVPRAAVAIDCGHVDSLVRPCLSYVQ-GGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSRV 113 The following BLAST results are available for this feature:
BLAST of CB304613 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304613 ID=CB304613; Name=CB304613; organism=Citrus sinensis; type=EST; length=583bpback to top |