CB304617
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_STAA1 (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=clpP PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.187e-20 Identity = 49/114 (42.98%), Postives = 70/114 (61.40%), Query Frame = -1 Query: 286 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRP 627 DT+Q +K V T C+G A + FLLA G KG R A+P + + + P G A+GQA +I A+ +L+ R+ + + LS +TGQ EKI KD R ++EA EYGLID ++ P Sbjct: 79 DTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVP 192
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_NATTJ (ATP-dependent Clp protease proteolytic subunit OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=clpP PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.187e-20 Identity = 49/115 (42.61%), Postives = 72/115 (62.61%), Query Frame = -1 Query: 283 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPP 627 DTMQ ++S V T CVG A + LLA G +G R +P SRI L P G A+GQA D+ A E+++ ++ + + L+ TGQP E+I+KD R S+EA +YG+ID +++ P Sbjct: 79 DTMQYIRSDVSTICVGMAASMGAVLLAAGNEGKRFCLPNSRIMLHQPMGGAQGQAADVEIHAREIMKTKERLNQILAHHTGQPVEQISKDTDRDFFMSSEEAQKYGVIDDVLKRP 193
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_FRATW (ATP-dependent Clp protease proteolytic subunit OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=clpP PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.187e-20 Identity = 51/112 (45.54%), Postives = 65/112 (58.04%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T C+G A + LLAGG KG R ++P S+I + P G RGQA DI A +LR++D + K L+ TGQ E I KD R + EA YGLID +I Sbjct: 82 DTMQFIKPDVSTICIGLAASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTDRDNFMMADEAKAYGLIDHVI 193
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_FRATT (ATP-dependent Clp protease proteolytic subunit OS=Francisella tularensis subsp. tularensis GN=clpP PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.187e-20 Identity = 51/112 (45.54%), Postives = 65/112 (58.04%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T C+G A + LLAGG KG R ++P S+I + P G RGQA DI A +LR++D + K L+ TGQ E I KD R + EA YGLID +I Sbjct: 82 DTMQFIKPDVSTICIGLAASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTDRDNFMMADEAKAYGLIDHVI 193
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_FRATO (ATP-dependent Clp protease proteolytic subunit OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=clpP PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.187e-20 Identity = 51/112 (45.54%), Postives = 65/112 (58.04%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T C+G A + LLAGG KG R ++P S+I + P G RGQA DI A +LR++D + K L+ TGQ E I KD R + EA YGLID +I Sbjct: 82 DTMQFIKPDVSTICIGLAASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTDRDNFMMADEAKAYGLIDHVI 193
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_FRATN (ATP-dependent Clp protease proteolytic subunit OS=Francisella tularensis subsp. novicida (strain U112) GN=clpP PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.187e-20 Identity = 51/112 (45.54%), Postives = 65/112 (58.04%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T C+G A + LLAGG KG R ++P S+I + P G RGQA DI A +LR++D + K L+ TGQ E I KD R + EA YGLID +I Sbjct: 82 DTMQFIKPDVSTICIGLAASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTDRDNFMMADEAKAYGLIDHVI 193
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_FRATM (ATP-dependent Clp protease proteolytic subunit OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=clpP PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.187e-20 Identity = 51/112 (45.54%), Postives = 65/112 (58.04%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T C+G A + LLAGG KG R ++P S+I + P G RGQA DI A +LR++D + K L+ TGQ E I KD R + EA YGLID +I Sbjct: 82 DTMQFIKPDVSTICIGLAASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTDRDNFMMADEAKAYGLIDHVI 193
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_FRATH (ATP-dependent Clp protease proteolytic subunit OS=Francisella tularensis subsp. holarctica (strain LVS) GN=clpP PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.187e-20 Identity = 51/112 (45.54%), Postives = 65/112 (58.04%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T C+G A + LLAGG KG R ++P S+I + P G RGQA DI A +LR++D + K L+ TGQ E I KD R + EA YGLID +I Sbjct: 82 DTMQFIKPDVSTICIGLAASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTDRDNFMMADEAKAYGLIDHVI 193
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_FRATF (ATP-dependent Clp protease proteolytic subunit OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=clpP PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.187e-20 Identity = 51/112 (45.54%), Postives = 65/112 (58.04%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T C+G A + LLAGG KG R ++P S+I + P G RGQA DI A +LR++D + K L+ TGQ E I KD R + EA YGLID +I Sbjct: 82 DTMQFIKPDVSTICIGLAASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTDRDNFMMADEAKAYGLIDHVI 193
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_FRAT1 (ATP-dependent Clp protease proteolytic subunit OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=clpP PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.187e-20 Identity = 51/112 (45.54%), Postives = 65/112 (58.04%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T C+G A + LLAGG KG R ++P S+I + P G RGQA DI A +LR++D + K L+ TGQ E I KD R + EA YGLID +I Sbjct: 82 DTMQFIKPDVSTICIGLAASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTDRDNFMMADEAKAYGLIDHVI 193 The following BLAST results are available for this feature:
BLAST of CB304617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304617 ID=CB304617; Name=CB304617; organism=Citrus sinensis; type=EST; length=627bpback to top |