CB304624

Overview
NameCB304624
Unique NameCB304624
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length617
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304624 vs. ExPASy Swiss-Prot
Match: PPIB_ASPNG (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus niger GN=cypB PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 7.781e-28
Identity = 63/94 (67.02%), Postives = 72/94 (76.60%), Query Frame = -1
Query:  297 GRGGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE--AEGRQNGTPKSKVVIADSGE 572
            G GG+SIYGEKF DENFKL+HT  GLLSMANAG DTNGSQFFITTV T WLDGRHVVFG+VL G ++V ++E   +GR +  P   V I  SGE
Sbjct:  103 GTGGKSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHVVFGEVLEGYEIVAQIENVPKGRSD-RPVETVKIVKSGE 195          

HSP 2 Score: 21.1718 bits (43), Expect = 7.781e-28
Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = -2
Query:  572 VQGGDFTLGE 601
            +QGGDFT G+
Sbjct:   93 IQGGDFTRGD 102          
BLAST of CB304624 vs. ExPASy Swiss-Prot
Match: PPIB_ASPOR (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus oryzae GN=cpr2 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 7.797e-28
Identity = 62/93 (66.67%), Postives = 70/93 (75.27%), Query Frame = -1
Query:  297 GRGGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNG-TPKSKVVIADSGE 572
            G GG+SIYGEKF DENFK++HT  GLLSMANAG DTNGSQFFITTV T WLDGRHVVFG+VL G +VV  +E   +  G  P+  V I  SGE
Sbjct:   88 GTGGKSIYGEKFKDENFKIRHTKKGLLSMANAGKDTNGSQFFITTVATPWLDGRHVVFGEVLEGYEVVEAIENVPKVPGDKPQQVVKIVKSGE 180          

HSP 2 Score: 21.557 bits (44), Expect = 7.797e-28
Identity = 7/13 (53.85%), Postives = 10/13 (76.92%), Query Frame = -2
Query:  572 QLYVQGGDFTLGE 610
            +  +QGGDFT G+
Sbjct:   75 EFMIQGGDFTRGD 87          
BLAST of CB304624 vs. ExPASy Swiss-Prot
Match: PPID_ASPOR (Peptidyl-prolyl cis-trans isomerase D OS=Aspergillus oryzae GN=cpr6 PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.003e-27
Identity = 62/97 (63.92%), Postives = 71/97 (73.20%), Query Frame = -1
Query:  297 FHSW*GRGGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSGE 587
            F ++ G GGESIYGEKFPDENF+LKH  P LLSMAN+GP TNGSQFFITTV T  LDG+HVVFG+V++G  VV KVE    Q   P   V I + GE
Sbjct:   76 FTAFNGTGGESIYGEKFPDENFELKHDKPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHVVFGEVINGKSVVRKVENMNTQADKPVKDVTIVECGE 172          

HSP 2 Score: 20.4014 bits (41), Expect = 1.003e-27
Identity = 7/10 (70.00%), Postives = 8/10 (80.00%), Query Frame = -2
Query:  581 QLYVQGGDFT 610
            Q  +QGGDFT
Sbjct:   68 QFMIQGGDFT 77          
BLAST of CB304624 vs. ExPASy Swiss-Prot
Match: PPID_NEUCR (41 kDa peptidyl-prolyl cis-trans isomerase OS=Neurospora crassa GN=cyp-41 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.306e-27
Identity = 61/92 (66.30%), Postives = 67/92 (72.83%), Query Frame = -1
Query:  297 GRGGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSGE 572
            G GGESIYG KF DENF+LKH  P LLSMANAGP TNGSQFF+TTV T  LDG+HVVFG+VLSG  VV ++E    Q   P    VIAD GE
Sbjct:   87 GTGGESIYGAKFEDENFQLKHDRPFLLSMANAGPGTNGSQFFVTTVPTPHLDGKHVVFGEVLSGKSVVRQIENLKTQGDKPTKDAVIADCGE 178          

HSP 2 Score: 22.3274 bits (46), Expect = 1.306e-27
Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = -2
Query:  575 QLYVQGGDFTLG 610
            Q  +QGGDFT G
Sbjct:   74 QFMIQGGDFTAG 85          
BLAST of CB304624 vs. ExPASy Swiss-Prot
Match: CP18D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Arabidopsis thaliana GN=CYP18-4 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.318e-27
Identity = 60/103 (58.25%), Postives = 72/103 (69.90%), Query Frame = -1
Query:  297 LCSRR*FHSW*GRGGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSGE 605
            +C    F +  G GGESIYG KF DENF  KHTG G+LSMAN+GP+TNGSQFFI T  TSWLDG+HVVFG+V+ G+DVV  +E  G  +G     V I D G+
Sbjct:   68 MCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSGKTSKVVTITDCGQ 170          
BLAST of CB304624 vs. ExPASy Swiss-Prot
Match: PPIB_ASPFU (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus fumigatus GN=cpr2 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.319e-27
Identity = 62/93 (66.67%), Postives = 70/93 (75.27%), Query Frame = -1
Query:  297 GRGGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNG-TPKSKVVIADSGE 572
            G GG+SIYGEKF DENFKL+HT  GLLSMANAG DTNGSQFFITTV T WLDGRHVVFG+VL G +VV ++E   +  G  P   V I  SG+
Sbjct:  104 GTGGKSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHVVFGEVLEGYEVVEQIENVPKGPGDKPAETVKIVKSGQ 196          

HSP 2 Score: 21.1718 bits (43), Expect = 1.319e-27
Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = -2
Query:  572 VQGGDFTLGE 601
            +QGGDFT G+
Sbjct:   94 IQGGDFTRGD 103          
BLAST of CB304624 vs. ExPASy Swiss-Prot
Match: PPIB_EMENI (Peptidyl-prolyl cis-trans isomerase B OS=Emericella nidulans GN=cpr2 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.234e-27
Identity = 62/94 (65.96%), Postives = 70/94 (74.47%), Query Frame = -1
Query:  297 GRGGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE--AEGRQNGTPKSKVVIADSGE 572
            G GG+SIYG KF DENFKL+HT  GLLSMANAG DTNGSQFFITT  T WLDG+HVVFG+VL G D+V K++   +GR N  P   V I  SGE
Sbjct:  102 GTGGKSIYGAKFKDENFKLRHTKTGLLSMANAGKDTNGSQFFITTAVTPWLDGKHVVFGEVLEGYDIVDKIQNVPKGR-NDRPLKDVKIVKSGE 194          

HSP 2 Score: 21.1718 bits (43), Expect = 2.234e-27
Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = -2
Query:  572 VQGGDFTLGE 601
            +QGGDFT G+
Sbjct:   92 IQGGDFTRGD 101          
BLAST of CB304624 vs. ExPASy Swiss-Prot
Match: PPIA_STRCH (Peptidyl-prolyl cis-trans isomerase A OS=Streptomyces chrysomallus GN=ppiA PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 4.958e-27
Identity = 61/93 (65.59%), Postives = 71/93 (76.34%), Query Frame = -1
Query:  300 GRGGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVL--SGMDVVYKVEAEGRQNGTPKSKVVIADSG 572
            G GG+SIYGEKF DENF+LKH   GLLSMANAG +TNGSQFFITTV T WLDG+HVVFG+V     M +V K+EA G  +G   +KV IA+SG
Sbjct:   71 GTGGKSIYGEKFADENFQLKHDRVGLLSMANAGKNTNGSQFFITTVLTPWLDGKHVVFGEVADDDSMALVRKIEALGSSSGRTSAKVTIAESG 163          

HSP 2 Score: 20.4014 bits (41), Expect = 4.958e-27
Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = -2
Query:  572 VQGGDFTLGE 601
            +QGGDFT G+
Sbjct:   61 LQGGDFTRGD 70          
BLAST of CB304624 vs. ExPASy Swiss-Prot
Match: PPIA_ECHGR (Peptidyl-prolyl cis-trans isomerase OS=Echinococcus granulosus GN=CYP-1 PE=2 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 5.010e-27
Identity = 60/103 (58.25%), Postives = 73/103 (70.87%), Query Frame = -1
Query:  297 LCSRR*FHSW*GRGGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSGE 605
            +C    F +  G GG+SIYG KF DENF  KH+ P +LSMANAG +TNGSQFFITT  TSWLDG+HVVFG+V SG DVV  +EA G  +G    +V+I D G+
Sbjct:   59 MCQGGDFTAGNGTGGKSIYGSKFEDENFNHKHSKPMMLSMANAGKNTNGSQFFITTAVTSWLDGKHVVFGEVESGEDVVKDMEAVGSSSGKTSQEVLITDCGQ 161          
BLAST of CB304624 vs. ExPASy Swiss-Prot
Match: CYPH_LUPLU (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.010e-27
Identity = 60/103 (58.25%), Postives = 70/103 (67.96%), Query Frame = -1
Query:  297 LCSRR*FHSW*GRGGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSGE 605
            +C    F +  G G ESIYG KF DENF  +HTGPG+LSMANAG  TNGSQFFI T  T WLDG+HVVFGKV+ GM+VV  +E  G  +G     V IAD G+
Sbjct:   68 MCQGGDFTAGNGTGAESIYGAKFADENFIKRHTGPGILSMANAGAGTNGSQFFICTEKTEWLDGKHVVFGKVIEGMNVVRDIEKVGSGSGKTSRPVTIADCGQ 170          
The following BLAST results are available for this feature:
BLAST of CB304624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 202
Match NameE-valueIdentityDescription
PPIB_ASPNG7.781e-2867.02Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIB_ASPOR7.797e-2866.67Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPID_ASPOR1.003e-2763.92Peptidyl-prolyl cis-trans isomerase D OS=Aspergill... [more]
PPID_NEUCR1.306e-2766.3041 kDa peptidyl-prolyl cis-trans isomerase OS=Neur... [more]
CP18D_ARATH1.318e-2758.25Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Ara... [more]
PPIB_ASPFU1.319e-2766.67Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIB_EMENI2.234e-2765.96Peptidyl-prolyl cis-trans isomerase B OS=Emericell... [more]
PPIA_STRCH4.958e-2765.59Peptidyl-prolyl cis-trans isomerase A OS=Streptomy... [more]
PPIA_ECHGR5.010e-2758.25Peptidyl-prolyl cis-trans isomerase OS=Echinococcu... [more]
CYPH_LUPLU5.010e-2758.25Peptidyl-prolyl cis-trans isomerase OS=Lupinus lut... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0001_IaR_E12 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0001_IaR_E12 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304624 ID=CB304624; Name=CB304624; organism=Citrus sinensis; type=EST; length=617bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAGCATTCGGTACTTATTT
CGGGGCTTCCATAAGCTTCTTCTACACAAGTTAGAAAAGAAACACTAAAT
GGGATGAGATAGCTATCAGAGAAAAGGATCCCCTTAAAATGAAGCACCAG
CTTGGCAAACAACCTAGGACATTTTAAAATGGCTATTACATGATAAATAG
GCAAATTAAGAGTATCTTCATGAAGGGTGAAAAGACGAGAGGATTAAAAA
GGGGTATAGCGTAATTATATAATTATGGGGGAAATCACAGAGGAAGCTCA
CCGCTGTCTGCAATGACGACTTTGCTCTTCGGAGTGCCATTCTGCCTCCC
TTCAGCTTCAACCTTGTAAACTACATCCATCCCCGATAGCACCTTTCCAA
ATACAACATGCCTGCCATCCAACCAGCTAGTTGTCACAGTTGTAATGAAG
AATTGTGAACCATTGGTGTCTGGCCCAGCATTTGCCATTGACAAAAGCCC
TGGGCCGGTGTGCTTCAGTTTGAAATTTTCGTCAGGGAACTTCTCTCCAT
AAATTGACTCTCCACCTCTTCCTCACCAAGAGTGAAATCACCTCCTTGAA
CATAAAGCTGGGAATAA
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