CB304628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: CIRBP_RANCA (Cold-inducible RNA-binding protein OS=Rana catesbeiana GN=cirbp PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.323e-15 Identity = 39/78 (50.00%), Postives = 53/78 (67.95%), Query Frame = -3 Query: 443 EFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEA 676 E + FVGGL++ T + L FS YG I E ++ DRET RSRGFGFV F + + +DA+ GMNG+ +DGR I V++A Sbjct: 5 EGKLFVGGLSFDTDEQCLETVFSKYGQIQEVVVVKDRETKRSRGFGFVTFENCEDAKDAMAGMNGKTVDGRQIRVDQA 82
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: CIRBP_RAT (Cold-inducible RNA-binding protein OS=Rattus norvegicus GN=Cirbp PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.952e-15 Identity = 38/78 (48.72%), Postives = 54/78 (69.23%), Query Frame = -3 Query: 443 EFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEA 676 E + FVGGL++ T + +L + FS YG I E ++ DRET RSRGFGFV F + +DA+ MNG+++DGR I V++A Sbjct: 5 EGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA 82
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: CIRBP_MOUSE (Cold-inducible RNA-binding protein OS=Mus musculus GN=Cirbp PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.952e-15 Identity = 38/78 (48.72%), Postives = 54/78 (69.23%), Query Frame = -3 Query: 443 EFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEA 676 E + FVGGL++ T + +L + FS YG I E ++ DRET RSRGFGFV F + +DA+ MNG+++DGR I V++A Sbjct: 5 EGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA 82
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: CIRBP_CRIGR (Cold-inducible RNA-binding protein OS=Cricetulus griseus GN=CIRBP PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.952e-15 Identity = 38/78 (48.72%), Postives = 54/78 (69.23%), Query Frame = -3 Query: 443 EFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEA 676 E + FVGGL++ T + +L + FS YG I E ++ DRET RSRGFGFV F + +DA+ MNG+++DGR I V++A Sbjct: 5 EGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA 82
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: CIRBB_XENLA (Cold-inducible RNA-binding protein B OS=Xenopus laevis GN=cirbp-B PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.186e-14 Identity = 38/78 (48.72%), Postives = 52/78 (66.67%), Query Frame = -3 Query: 443 EFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEA 676 E + F+GGL + T + SL + FS YG I E ++ DRET RSRGFGFV F + +DA+ MNG+ +DGR I V++A Sbjct: 4 EGKLFIGGLNFDTNEESLEQVFSKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDAMMAMNGKAVDGRQIRVDQA 81
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: CIRBA_XENLA (Cold-inducible RNA-binding protein A OS=Xenopus laevis GN=cirbp-A PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.642e-14 Identity = 37/78 (47.44%), Postives = 53/78 (67.95%), Query Frame = -3 Query: 443 EFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEA 676 E + F+GGL + T + L +AF+ YG I E ++ DRET RSRGFGFV F + +DA+ MNG+++DGR I V++A Sbjct: 4 EGKLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMAMNGKSVDGRQIRVDQA 81
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: ROC1_ARATH (Ribonucleoprotein At2g37220, chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.450e-14 Identity = 33/77 (42.86%), Postives = 55/77 (71.43%), Query Frame = -3 Query: 440 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 670 R +VG L+W D +L FS G ++E+++I DR++GRS+GFGFV + + +++AI+ ++G +LDGR I V+EA+ Sbjct: 205 RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAE 281
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: RBM3_MOUSE (Putative RNA-binding protein 3 OS=Mus musculus GN=Rbm3 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.506e-14 Identity = 37/78 (47.44%), Postives = 53/78 (67.95%), Query Frame = -3 Query: 443 EFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEA 676 E + FVGGL + T + +L + FS++G I E ++ DRET RSRGFGF+ F + + DA+ MNG++LDGR I V+ A Sbjct: 5 EGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHA 82
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: ROC2_ARATH (29 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana GN=RBP29 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 7.686e-14 Identity = 33/77 (42.86%), Postives = 52/77 (67.53%), Query Frame = -3 Query: 440 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 670 R +VG L+W D +L F+ G ++E+++I DR++GRS+GFGFV + ++ AI +NG +LDGR I V+EA+ Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAE 334
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: RBM3_RAT (Putative RNA-binding protein 3 OS=Rattus norvegicus GN=Rbm3 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.311e-13 Identity = 36/78 (46.15%), Postives = 52/78 (66.67%), Query Frame = -3 Query: 443 EFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEA 676 E + FVGGL + T + +L + FS++G I E ++ DRET RSRGFGF+ F + + D + MNG++LDGR I V+ A Sbjct: 5 EGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDVMRAMNGESLDGRQIRVDHA 82 The following BLAST results are available for this feature:
BLAST of CB304628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304628 ID=CB304628; Name=CB304628; organism=Citrus sinensis; type=EST; length=681bpback to top |