CB304628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: RB24A_XENLA (RNA-binding protein 24-A OS=Xenopus laevis GN=rbm24-A PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = -3 Query: 443 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEA 670 + FVGGL + TTDSSL + F +GDI E+ +I DR+TG+SRG+GFV D + A + N +DGR VN A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: HNRPG_RAT (Heterogeneous nuclear ribonucleoprotein G OS=Rattus norvegicus GN=Rbmx PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11 Identity = 32/76 (42.11%), Postives = 45/76 (59.21%), Query Frame = -3 Query: 443 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEA 670 + F+GGL T + +L F YG I+E ++ DRET +SRGF FV F +D MNG++LDG+ I V +A Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARDMNGKSLDGKAIKVEQA 84
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: RBM38_HUMAN (RNA-binding protein 38 OS=Homo sapiens GN=RBM38 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.090e-11 Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = -3 Query: 443 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEA 670 + FVGGL + TTD+SL + F +GDI E+ +I DR+TG+SRG+GFV D + A + N +DGR VN A Sbjct: 35 KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 109
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: HNRPG_MOUSE (Heterogeneous nuclear ribonucleoprotein G OS=Mus musculus GN=Rbmx PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.090e-11 Identity = 32/76 (42.11%), Postives = 45/76 (59.21%), Query Frame = -3 Query: 443 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEA 670 + F+GGL T + +L F YG I+E ++ DRET +SRGF FV +DA MNG++LDG+ I V +A Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPADAKDAARDMNGKSLDGKAIKVEQA 84
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: ROC5_NICSY (33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 30/76 (39.47%), Postives = 47/76 (61.84%), Query Frame = -3 Query: 443 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEA 670 + +V L+WA T L +AF+ + +K+I DR +GRSRGFGF+ F ++M A++ MN L+GR + +N A Sbjct: 218 KLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEGRPLRLNVA 293
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: RBM38_XENTR (RNA-binding protein 38 OS=Xenopus tropicalis GN=rbm38 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = -3 Query: 443 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEA 670 + FVGGL + TTD+SL + F +GDI E+ +I DR+TG+SRG+GFV D + A + N +DGR VN A Sbjct: 12 KIFVGGLPYHTTDASLRKYFEVFGDIDEAVVITDRQTGKSRGYGFVTMSDRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: HNRPG_BOVIN (Heterogeneous nuclear ribonucleoprotein G OS=Bos taurus GN=RBMX PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 32/76 (42.11%), Postives = 45/76 (59.21%), Query Frame = -3 Query: 443 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEA 670 + F+GGL T + SL F YG I E ++ DRET +SRGF F+ F + A+ MNG++LDG+ I V +A Sbjct: 9 KLFIGGLNLETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADAKAAVRDMNGKSLDGKAIKVAQA 84 The following BLAST results are available for this feature:
BLAST of CB304628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304628 ID=CB304628; Name=CB304628; organism=Citrus sinensis; type=EST; length=681bpback to top |