CB304644
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: THIKA_MOUSE (3-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musculus GN=Acaa1a PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.328e-12 Identity = 45/120 (37.50%), Postives = 65/120 (54.17%), Query Frame = -2 Query: 48 ARDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRANAKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 404 A DV +V RTP+G G + + +L S + L+ KP + ++ GNVL G AR A +GIP +V +T+N+ CSSG++AV A I+ G DI +A G+ESMS Sbjct: 35 ASDVVVVHGRRTPIGRASRGGFKNTTPDELLSAVLTAVLQDVRLKPEQLGDISVGNVLEPGAGAVMARIAQFLSGIPETVPLSTVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMS 154
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: FADA_SACD2 (3-ketoacyl-CoA thiolase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=fadA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 7.415e-12 Identity = 46/126 (36.51%), Postives = 68/126 (53.97%), Query Frame = -2 Query: 45 SIKARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKR-ANAKPLLVQEVFFGNVLS-ANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 413 S++ RDV IV ARTPMG G +V A L + I L R A P + ++ +G V+ G AR L AG+P++V T+N++C S M A+ AA +I G+ D+ + GG+E M + Sbjct: 2 SLQPRDVVIVDYARTPMGRSKNGCYRNVRADDLSADLITGLLARNAALDPAQIDDMIWGCVMQRGEQGFNVARNILLRAGLPHTVPAQTVNRLCGSSMSALHTAAANIMAGLGDVYLVGGVEHMGH 127
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: THIKB_RAT (3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus GN=Acaa1b PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 1.265e-11 Identity = 44/120 (36.67%), Postives = 64/120 (53.33%), Query Frame = -2 Query: 48 ARDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRANAKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 404 A DV +V RTP+G G + +L S + L+ KP + ++ GNVL G A AR A +GIP +V + +N+ CSSG++AV A I+ G DI +A G+ESM+ Sbjct: 35 ASDVVVVHGRRTPIGRAGRGGFKDTTPDELLSAVLTAVLQDVKLKPECLGDISVGNVLQPGAGAAMARIAQFLSGIPETVPLSAVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMT 154
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: FADA_CHRSD (3-ketoacyl-CoA thiolase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=fadA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.265e-11 Identity = 44/129 (34.11%), Postives = 69/129 (53.49%), Query Frame = -2 Query: 39 SIKARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKR-ANAKPLLVQEVFFGNVLSANLGQAP--ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 413 S+ RD+ +V RT M G+ +V A L + ++ R AN P V +V +G V + L Q+ AR AA+ GIP +V T+N++C S M A+ +A +I+ G+ D + GG+E M + P Sbjct: 2 SLNPRDIVVVDAVRTAMAKAKHGAFRNVRAENLSAAVMQALFDRNANLVPAEVDDVIWGCV-NQTLEQSMNIARNAAIMTGIPRTVPAQTVNRLCGSSMSALHIATANIKAGMGDFYIIGGVEHMEHVP 129
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: THIKB_MOUSE (3-ketoacyl-CoA thiolase B, peroxisomal OS=Mus musculus GN=Acaa1b PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.652e-11 Identity = 44/120 (36.67%), Postives = 64/120 (53.33%), Query Frame = -2 Query: 48 ARDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRANAKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 404 A DV +V RTP+G G + +L S + L+ KP + ++ GNVL G AR A +GIP +V +T+N+ CSSG++AV A I+ G DI +A G+ESM+ Sbjct: 35 ASDVVVVHGRRTPIGRASRGCFKDTTPDELLSAVLTAVLQDVKLKPEQLGDISVGNVLQPGAGAIMARIAQFLSGIPETVPLSTVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMT 154
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: THIKA_RAT (3-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus norvegicus GN=Acaa1a PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 1.652e-11 Identity = 44/120 (36.67%), Postives = 63/120 (52.50%), Query Frame = -2 Query: 48 ARDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRANAKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 404 A DV +V RTP+G G + +L S + L+ KP + ++ GNVL G AR A +GIP +V + +N+ CSSG++AV A I+ G DI +A G+ESMS Sbjct: 35 ASDVVVVHGRRTPIGRAGRGGFKDTTPDELLSAVLTAVLQDVKLKPECLGDISVGNVLEPGAGAVMARIAQFLSGIPETVPLSAVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMS 154
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: FADA_ALISL (3-ketoacyl-CoA thiolase OS=Aliivibrio salmonicida (strain LFI1238) GN=fadA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.818e-11 Identity = 43/124 (34.68%), Postives = 70/124 (56.45%), Query Frame = -2 Query: 39 RDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKR-ANAKPLLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 401 ++V IV RTPMG G A L + ++ L+R N P ++++++G V G AR A+L AG+P S+ TT+N++C S M+A+ A+++I +G DI + GG+E M + P Sbjct: 2 KNVVIVDCIRTPMGRSKNGVFRHTRAEDLSAHLMKGLLERNPNVDPNQIEDIYWGCVQQTLEQGFNIARNASLLAGLPKSIAATTVNRLCGSSMQALHDASRAIMVGDADICIIGGVEHMGHVP 125
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: FADA_ALCBS (3-ketoacyl-CoA thiolase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=fadA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.818e-11 Identity = 45/126 (35.71%), Postives = 67/126 (53.17%), Query Frame = -2 Query: 45 SIKARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKR-ANAKPLLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 413 S+ +DV IV RTPMG G V A KL + I+ + R N L ++V +G V + G AR ++ AG+P + T+N++C S M+A+ A+QSI G D+ V GG+E M + Sbjct: 2 SLNPKDVVIVDAVRTPMGKSRNGQFRHVRAEKLSAQLIQALMARNPNWDIQLTEDVIWGCVNQTKEQGMNIARNISMLAGLPRTSAAQTVNRLCGSSMQALHSASQSIMTGNGDVFVIGGVEHMGH 127
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: FADA_PSEAE (3-ketoacyl-CoA thiolase OS=Pseudomonas aeruginosa GN=fadA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.680e-11 Identity = 45/126 (35.71%), Postives = 66/126 (52.38%), Query Frame = -2 Query: 45 SIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANAK--PLLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 413 S+ RDV IV RTPMG G + + + S + L N K P V++V +G V + G AR A+L IP++ T++++C S M A+ AAQ+IQ G D+ V GG+E M + Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAETMSAHLISKLLERNPKVDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIQTGNGDVFVIGGVEHMGH 127
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: FADA_PSEAB (3-ketoacyl-CoA thiolase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=fadA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.680e-11 Identity = 45/126 (35.71%), Postives = 66/126 (52.38%), Query Frame = -2 Query: 45 SIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANAK--PLLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 413 S+ RDV IV RTPMG G + + + S + L N K P V++V +G V + G AR A+L IP++ T++++C S M A+ AAQ+IQ G D+ V GG+E M + Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAETMSAHLISKLLERNPKVDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIQTGNGDVFVIGGVEHMGH 127 The following BLAST results are available for this feature:
BLAST of CB304644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304644 ID=CB304644; Name=CB304644; organism=Citrus sinensis; type=EST; length=477bpback to top |