CB304644
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: FADA_PSEA7 (3-ketoacyl-CoA thiolase OS=Pseudomonas aeruginosa (strain PA7) GN=fadA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.680e-11 Identity = 45/126 (35.71%), Postives = 66/126 (52.38%), Query Frame = -2 Query: 45 SIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANAK--PLLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 413 S+ RDV IV RTPMG G + + + S + L N K P V++V +G V + G AR A+L IP++ T++++C S M A+ AAQ+IQ G D+ V GG+E M + Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAETMSAHLISKLLERNPKVDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIQTGNGDVFVIGGVEHMGH 127
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: FADA_HAHCH (3-ketoacyl-CoA thiolase OS=Hahella chejuensis (strain KCTC 2396) GN=fadA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.680e-11 Identity = 43/128 (33.59%), Postives = 67/128 (52.34%), Query Frame = -2 Query: 39 SIKARDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRAN-AKPLLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 413 S+ RDV ++ R+PMG G +V A L + I+ R + P V+++ +G V + G ARQ +L IP++ T+N++C S M A+ AAQ+I G D+ V GG+E M + P Sbjct: 2 SLNPRDVVVIDCVRSPMGRAKAGCFRNVRAETLSATLIDALFDRNDKVDPAEVEDLIWGCVNQTLEQGFNVARQISLLTRIPHTSSAQTVNRLCGSAMSAIHTAAQAIMTGNGDVFVVGGVEHMGHVP 129
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: THIK2_ARATH (3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis thaliana GN=PED1 PE=1 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 8.198e-11 Identity = 42/127 (33.07%), Postives = 64/127 (50.39%), Query Frame = -2 Query: 39 SIKARDVCIVGVARTPM-GGFLGSLSSVSATKLGSIAIECALKRANAKPLLVQEVFFGNVLSANLGQAP-ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 413 S+ DV IV RTP+ G+ L + + +++ N P V ++ G VL+ +A R AA AG P +V T+N+ CSSG++AV A +I+ G DI + G+ESM+ P Sbjct: 46 SLYGDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNP 172 The following BLAST results are available for this feature:
BLAST of CB304644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304644 ID=CB304644; Name=CB304644; organism=Citrus sinensis; type=EST; length=477bpback to top |