CB304656
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304656 vs. ExPASy Swiss-Prot
Match: RL30_MOUSE (60S ribosomal protein L30 OS=Mus musculus GN=Rpl30 PE=2 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 7.566e-27 Identity = 53/66 (80.30%), Postives = 62/66 (93.94%), Query Frame = -3 Query: 380 KLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLP 577 KL+IL+NNCP LRKSEIEYYAMLAK GVHHY+GNN++LGTACGKY+RV L+IIDPGDSDII+S+P Sbjct: 44 KLVILANNCPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMP 109
BLAST of CB304656 vs. ExPASy Swiss-Prot
Match: RL30_MACFA (60S ribosomal protein L30 OS=Macaca fascicularis GN=RPL30 PE=3 SV=3) HSP 1 Score: 120.168 bits (300), Expect = 7.566e-27 Identity = 53/66 (80.30%), Postives = 62/66 (93.94%), Query Frame = -3 Query: 380 KLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLP 577 KL+IL+NNCP LRKSEIEYYAMLAK GVHHY+GNN++LGTACGKY+RV L+IIDPGDSDII+S+P Sbjct: 44 KLVILANNCPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMP 109
BLAST of CB304656 vs. ExPASy Swiss-Prot
Match: RL30_HUMAN (60S ribosomal protein L30 OS=Homo sapiens GN=RPL30 PE=1 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 7.566e-27 Identity = 53/66 (80.30%), Postives = 62/66 (93.94%), Query Frame = -3 Query: 380 KLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLP 577 KL+IL+NNCP LRKSEIEYYAMLAK GVHHY+GNN++LGTACGKY+RV L+IIDPGDSDII+S+P Sbjct: 44 KLVILANNCPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMP 109
BLAST of CB304656 vs. ExPASy Swiss-Prot
Match: RL30_CHICK (60S ribosomal protein L30 OS=Gallus gallus GN=RPL30 PE=3 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 7.566e-27 Identity = 53/66 (80.30%), Postives = 62/66 (93.94%), Query Frame = -3 Query: 380 KLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLP 577 KL+IL+NNCP LRKSEIEYYAMLAK GVHHY+GNN++LGTACGKY+RV L+IIDPGDSDII+S+P Sbjct: 44 KLVILANNCPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMP 109
BLAST of CB304656 vs. ExPASy Swiss-Prot
Match: RL30_BOVIN (60S ribosomal protein L30 OS=Bos taurus GN=RPL30 PE=3 SV=3) HSP 1 Score: 120.168 bits (300), Expect = 7.566e-27 Identity = 53/66 (80.30%), Postives = 62/66 (93.94%), Query Frame = -3 Query: 380 KLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLP 577 KL+IL+NNCP LRKSEIEYYAMLAK GVHHY+GNN++LGTACGKY+RV L+IIDPGDSDII+S+P Sbjct: 44 KLVILANNCPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMP 109
BLAST of CB304656 vs. ExPASy Swiss-Prot
Match: RL30_ICTPU (60S ribosomal protein L30 OS=Ictalurus punctatus GN=rpl30 PE=3 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 1.686e-26 Identity = 52/66 (78.79%), Postives = 62/66 (93.94%), Query Frame = -3 Query: 380 KLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLP 577 KL+IL+NNCP LRKSEIEYYAML+K GVHHY+GNN++LGTACGKY+RV L+IIDPGDSDII+S+P Sbjct: 44 KLVILANNCPALRKSEIEYYAMLSKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMP 109
BLAST of CB304656 vs. ExPASy Swiss-Prot
Match: RL30_BRABE (60S ribosomal protein L30 OS=Branchiostoma belcheri GN=RPL30 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.427e-25 Identity = 52/68 (76.47%), Postives = 61/68 (89.71%), Query Frame = -3 Query: 374 KLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGD 577 KLII++NN P LRKSEIEYYAMLAK GVHHY+GNN++LGTACGKYFRV L+I DPGDSDII+S+P + Sbjct: 41 KLIIIANNTPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYFRVCTLAITDPGDSDIIRSMPAE 108
BLAST of CB304656 vs. ExPASy Swiss-Prot
Match: RL30_SPOFR (60S ribosomal protein L30 OS=Spodoptera frugiperda GN=RpL30 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.060e-24 Identity = 49/66 (74.24%), Postives = 59/66 (89.39%), Query Frame = -3 Query: 380 KLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLP 577 KL+I++ N PPLRKSEIEYYA+LAK GVHHY+GNN++LGTACGKY+RV L+I DPGDSDII +LP Sbjct: 44 KLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLP 109
BLAST of CB304656 vs. ExPASy Swiss-Prot
Match: RL30A_SCHPO (60S ribosomal protein L30-1 OS=Schizosaccharomyces pombe GN=rpl30a PE=2 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 6.204e-21 Identity = 44/62 (70.97%), Postives = 52/62 (83.87%), Query Frame = -3 Query: 392 KLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDII 577 KLI+++ NCPPLRKSE+EYYAML+K VHHY G N+DLGTACGK FRV L+I D GDSDI+ Sbjct: 46 KLILIAGNCPPLRKSELEYYAMLSKANVHHYAGTNIDLGTACGKLFRVGVLAITDAGDSDIL 107
BLAST of CB304656 vs. ExPASy Swiss-Prot
Match: RL30B_SCHPO (60S ribosomal protein L30-2 OS=Schizosaccharomyces pombe GN=rpl30b PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.058e-20 Identity = 43/62 (69.35%), Postives = 54/62 (87.10%), Query Frame = -3 Query: 392 KLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDII 577 KLI+++ N PPLRKSE+EYYAML++ VHHY+GNN+DLGTACGK FRV L++ID GDSDI+ Sbjct: 54 KLILIAANAPPLRKSELEYYAMLSRCSVHHYSGNNIDLGTACGKLFRVGVLAVIDAGDSDIL 115 The following BLAST results are available for this feature:
BLAST of CB304656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB304656 ID=CB304656; Name=CB304656; organism=Citrus sinensis; type=EST; length=582bpback to top |