CB304656
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304656 vs. ExPASy Swiss-Prot
Match: RL30_TRYBB (60S ribosomal protein L30 OS=Trypanosoma brucei brucei GN=RPL30 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.996e-19 Identity = 40/61 (65.57%), Postives = 51/61 (83.61%), Query Frame = -3 Query: 395 KLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDI 577 KL+++S NCPP+RK+EIEYY L+K +HHY+GNN+DLGTACG++FR LSI D GDSDI Sbjct: 42 KLVVISANCPPIRKAEIEYYCTLSKTPIHHYSGNNLDLGTACGRHFRACVLSITDVGDSDI 102
BLAST of CB304656 vs. ExPASy Swiss-Prot
Match: RL30_NEUCR (60S ribosomal protein L30 OS=Neurospora crassa GN=rpl-30 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.446e-19 Identity = 40/62 (64.52%), Postives = 52/62 (83.87%), Query Frame = -3 Query: 392 KLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDII 577 KLI++S N PPLRKSE+EYY+M++K VHHY G N++LGTACGK FR S ++I+D GDSDI+ Sbjct: 43 KLILISANTPPLRKSELEYYSMMSKTAVHHYTGTNIELGTACGKLFRCSTMAILDAGDSDIL 104
BLAST of CB304656 vs. ExPASy Swiss-Prot
Match: RL30_LEIMA (60S ribosomal protein L30 OS=Leishmania major GN=RPL30 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.294e-18 Identity = 37/61 (60.66%), Postives = 51/61 (83.61%), Query Frame = -3 Query: 395 KLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDI 577 KL++++NNCPP+R++E+EYY L+K +HHY+GNN+DLGTACGK FR LS+ + GDSDI Sbjct: 42 KLVVIANNCPPIRRAEVEYYCTLSKTPIHHYSGNNLDLGTACGKPFRTCVLSVTNVGDSDI 102
BLAST of CB304656 vs. ExPASy Swiss-Prot
Match: RL30_DICDI (60S ribosomal protein L30 OS=Dictyostelium discoideum GN=rpl30 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.916e-18 Identity = 42/65 (64.62%), Postives = 55/65 (84.62%), Query Frame = -3 Query: 383 KLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSL 577 KLI+L++N P +R+SEIEYYAML+K VH Y+GNNVDLGTA G+++RVS +SI D GDSDI+ +L Sbjct: 44 KLILLASNLPSIRRSEIEYYAMLSKTTVHLYSGNNVDLGTALGRHYRVSVMSITDAGDSDILTAL 108
BLAST of CB304656 vs. ExPASy Swiss-Prot
Match: RL30_YARLI (60S ribosomal protein L30 OS=Yarrowia lipolytica GN=RPL30 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.161e-17 Identity = 39/62 (62.90%), Postives = 50/62 (80.65%), Query Frame = -3 Query: 392 KLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDII 577 KL+I++ N P LRKSEIEYYAMLAK VHH+ G N +LGT+CG+ FRV ++I+D GDSDI+ Sbjct: 43 KLVIIAGNTPALRKSEIEYYAMLAKCTVHHFQGGNNELGTSCGRLFRVGAVTIMDAGDSDIL 104
BLAST of CB304656 vs. ExPASy Swiss-Prot
Match: RL30_CANGA (60S ribosomal protein L30 OS=Candida glabrata GN=RPL30 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.982e-15 Identity = 38/65 (58.46%), Postives = 51/65 (78.46%), Query Frame = -3 Query: 383 KLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSL 577 KLII++ N P LRKSE+EYYAML+K V+++ G N +LGTA GK FRV +S++D GDSDI+ +L Sbjct: 40 KLIIIAANTPVLRKSELEYYAMLSKTKVYYFQGGNNELGTAVGKLFRVGVVSVLDAGDSDILTAL 104
BLAST of CB304656 vs. ExPASy Swiss-Prot
Match: RL30_KLULA (60S ribosomal protein L30 OS=Kluyveromyces lactis GN=RPL30 PE=3 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 5.087e-15 Identity = 38/65 (58.46%), Postives = 51/65 (78.46%), Query Frame = -3 Query: 383 KLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSL 577 KLII++ N P LRKSE+EYYAML+K V+++ G N +LGTA GK FRV ++I+D GDSDI+ +L Sbjct: 40 KLIIIAANTPVLRKSELEYYAMLSKTKVYYFQGGNNELGTAVGKLFRVGVVTILDAGDSDILTAL 104
BLAST of CB304656 vs. ExPASy Swiss-Prot
Match: RL30_YEAST (60S ribosomal protein L30 OS=Saccharomyces cerevisiae GN=RPL30 PE=1 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 6.644e-15 Identity = 38/65 (58.46%), Postives = 51/65 (78.46%), Query Frame = -3 Query: 383 KLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSL 577 KLII++ N P LRKSE+EYYAML+K V+++ G N +LGTA GK FRV +SI++ GDSDI+ +L Sbjct: 40 KLIIIAANTPVLRKSELEYYAMLSKTKVYYFQGGNNELGTAVGKLFRVGVVSILEAGDSDILTTL 104
BLAST of CB304656 vs. ExPASy Swiss-Prot
Match: RL30_ASHGO (60S ribosomal protein L30 OS=Ashbya gossypii GN=RPL30 PE=3 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 6.644e-15 Identity = 37/65 (56.92%), Postives = 51/65 (78.46%), Query Frame = -3 Query: 383 KLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSL 577 KLII++ N P LRKSE+EYYAML+K V+++ G N +LGTA GK FRV ++++D GDSDI+ +L Sbjct: 40 KLIIIAANTPVLRKSELEYYAMLSKTKVYYFQGGNNELGTAVGKLFRVGVVTVLDAGDSDILTTL 104
BLAST of CB304656 vs. ExPASy Swiss-Prot
Match: RL30E_METTH (50S ribosomal protein L30e OS=Methanobacterium thermoautotrophicum GN=rpl30e PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.456e-11 Identity = 30/64 (46.88%), Postives = 46/64 (71.88%), Query Frame = -3 Query: 389 GKLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIK 580 GKL+++++N P K +IEYYA L+++ V+ + G +V+LG+ CGK F V L I DPGDS I++ Sbjct: 32 GKLVVMASNIPEDLKEDIEYYAKLSEIPVYTHEGTSVELGSVCGKPFTVGALLIQDPGDSTILE 95 The following BLAST results are available for this feature:
BLAST of CB304656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB304656 ID=CB304656; Name=CB304656; organism=Citrus sinensis; type=EST; length=582bpback to top |