CB304679
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304679 vs. ExPASy Swiss-Prot
Match: NLTP8_HORVU (Non-specific lipid-transfer protein Cw18 OS=Hordeum vulgare GN=CW18 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.885e-21 Identity = 46/92 (50.00%), Postives = 60/92 (65.22%), Query Frame = -3 Query: 241 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSTPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 516 AITCGQV+ +L PC A+ + G P CC+GV+ L G AR+T D+QA C CLK NA AAG+P +CGVS+PY IS + DCS++ Sbjct: 26 AITCGQVSSALGPCAAYAKGSGTSPSAGCCSGVKRLAGLARSTADKQATCRCLKSV---AGAYNAGRAAGIPSRCGVSVPYTISASVDCSKI 114
BLAST of CB304679 vs. ExPASy Swiss-Prot
Match: NLTP6_GOSHI (Non-specific lipid-transfer protein 6 OS=Gossypium hirsutum GN=LTP6 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.534e-20 Identity = 50/94 (53.19%), Postives = 58/94 (61.70%), Query Frame = -3 Query: 238 AITCGQVTGSLAPCIAFLRTGGRFPPPP-CCNGVRSLNGAARTTPDRQAACNCLKQAYRSTPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 516 AI+ QV SL PC+ ++R P PP C G+RSL AAR DRQAAC C+K IN VAAGLP QC V IPYKISP+ DC RV+ Sbjct: 27 AISYDQVKSSLLPCVGYVRGNNARPAPPNYCKGIRSLKSAARIRLDRQAACKCIKSLAADISDINYGVAAGLPGQCNVHIPYKISPSIDCKRVK 120
BLAST of CB304679 vs. ExPASy Swiss-Prot
Match: NLTP1_HORVU (Non-specific lipid-transfer protein 1 OS=Hordeum vulgare GN=LTP1 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.616e-20 Identity = 43/92 (46.74%), Postives = 60/92 (65.22%), Query Frame = -3 Query: 241 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSTPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 516 A+ CGQV + PC+ +++ GG P CCNGVR L+ A+++ DRQ CNCLK R +N N AA +P +C V++PY ISP+ DCSR+ Sbjct: 26 ALNCGQVDSKMKPCLTYVQ-GGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIHNLNLNNAASIPSKCNVNVPYTISPDIDCSRI 116
BLAST of CB304679 vs. ExPASy Swiss-Prot
Match: NLTP2_ARATH (Non-specific lipid-transfer protein 2 OS=Arabidopsis thaliana GN=LTP2 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.828e-20 Identity = 49/93 (52.69%), Postives = 62/93 (66.67%), Query Frame = -3 Query: 238 ITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRST-PGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 513 ++CG V G+LA CIA+L G CCNGV +L A TTPDRQ AC CL+ A ++ PG+N AAGLP C V+IPYKIS +T+C+ VR Sbjct: 27 MSCGTVNGNLAGCIAYLTRGAPLTQG-CCNGVTNLKNMASTTPDRQQACRCLQSAAKAVGPGLNTARAAGLPSACKVNIPYKISASTNCNTVR 118
BLAST of CB304679 vs. ExPASy Swiss-Prot
Match: NLTPC_ARATH (Non-specific lipid-transfer protein 12 OS=Arabidopsis thaliana GN=LTP12 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.778e-19 Identity = 45/96 (46.88%), Postives = 59/96 (61.46%), Query Frame = -3 Query: 241 PXTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSTPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 528 P + I CG VT +LA C+ +L G P CC GV+SL A+TTPDR+ C CLK A + G+N ++ A LP CGVSIPY IS +T+C + Sbjct: 21 PTESTIQCGTVTSTLAQCLTYLTNSGPLPSQ-CCVGVKSLYQLAQTTPDRKQVCECLKLAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNCDSI 115
BLAST of CB304679 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSJ (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. japonica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.934e-19 Identity = 40/92 (43.48%), Postives = 61/92 (66.30%), Query Frame = -3 Query: 241 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSTPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 516 A++CG VT S+APC++++ P CC+GVR+LNG A ++ DR+ AC+CLK S +N AA +P +CGVS+ + IS + DCS++ Sbjct: 29 AVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of CB304679 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSI (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. indica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.934e-19 Identity = 40/92 (43.48%), Postives = 61/92 (66.30%), Query Frame = -3 Query: 241 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSTPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 516 A++CG VT S+APC++++ P CC+GVR+LNG A ++ DR+ AC+CLK S +N AA +P +CGVS+ + IS + DCS++ Sbjct: 29 AVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of CB304679 vs. ExPASy Swiss-Prot
Match: NLTP1_WHEAT (Non-specific lipid-transfer protein (Fragment) OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.436e-18 Identity = 43/92 (46.74%), Postives = 61/92 (66.30%), Query Frame = -3 Query: 241 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSTPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 516 AI CG V + PC+++++ GG P CC+GV++L+ AR+ DRQ+ACNCLK R +N + A +P +CGV++PY IS N DCSRV Sbjct: 23 AIDCGHVDSLVRPCLSYVQ-GGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSRV 113
BLAST of CB304679 vs. ExPASy Swiss-Prot
Match: NLTPB_ARATH (Non-specific lipid-transfer protein 11 OS=Arabidopsis thaliana GN=LTP11 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.124e-18 Identity = 44/92 (47.83%), Postives = 54/92 (58.70%), Query Frame = -3 Query: 241 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSTPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 516 AI C QV LA C+ +L+ GG P P CCNG+ SL AA DRQ ACNCLK + PGIN + A LP +CGV+I S DC+ + Sbjct: 28 AIACPQVNMYLAQCLPYLKAGGN-PSPMCCNGLNSLKAAAPEKADRQVACNCLKSVANTIPGINDDFAKQLPAKCGVNIGVPFSKTVDCNSI 118
BLAST of CB304679 vs. ExPASy Swiss-Prot
Match: NLTP5_ARATH (Non-specific lipid-transfer protein 5 OS=Arabidopsis thaliana GN=LTP5 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.215e-17 Identity = 49/94 (52.13%), Postives = 59/94 (62.77%), Query Frame = -3 Query: 238 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSTPG-INANVAAGLPRQCGVSIPYKISPNTDCSRVR 516 AI+CG VTGSL C +L GG F P CC+GV+ LN ARTT DRQ AC C++ A R+ +NA AA LP C V I Y IS T+C+ VR Sbjct: 26 AISCGAVTGSLGQCYNYLTRGG-FIPRGCCSGVQRLNSLARTTRDRQQACRCIQGAARALGSRLNAGRAARLPGACRVRISYPISARTNCNTVR 118 The following BLAST results are available for this feature:
BLAST of CB304679 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304679 ID=CB304679; Name=CB304679; organism=Citrus sinensis; type=EST; length=608bpback to top |